Kryptolebias marmoratus (mangrove rivulus): 108235394
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Entry
108235394 CDS
T05608
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108235394 (nop2)
Enzymes [BR:
kmr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
108235394 (nop2)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108235394 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
Motif
Other DBs
NCBI-GeneID:
108235394
NCBI-ProteinID:
XP_017270857
UniProt:
A0A3Q3A177
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All DBs
Position
LG16:complement(9918942..9925482)
Genome browser
AA seq
753 aa
AA seq
DB search
MGRKLDPTNKVKRGPGKKAKKQHGAEVELAKFITDEEEGSKRLSSRARKRAAKRVQNVEK
PKVVVEKQPKKGFTDENSKWLKPTKRKRKMDEPESDDDSEDHWEEEEDEEEEEKQLMQKK
KEKKGAKLGLKKLEEEDEDSGDDDEEMIDDYGTLDDGSEDEAEGNSDGEDLLPIERAAKK
EKKLKESMALGSDEDDDEDDEEEEDEDDDDDEDKQKSDAEDEDDTIQTNTVEVDKFRLPS
AEESEKEGILSLDLKTVHQRIKDNIDVLCNFSAKREEGKDRVEYISLLKKDLCTYYSYNE
FLIEKLMDLFPLSELIDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWS
KVGLVIYDSSVPVGATPEYLAGHYMLQGASSFLPVMALSPQEGESVLDMSSAPGGKTTYI
AQLMRNTGVIIANDANAERLKSVVGNIHRLGVTNTLVCNYDGRQFPKVMGGFDRVLLDAP
CSGTGVIAKDPAVKTSKDEADIQRSAHLQKELILSAIDSINAASPTGGYLIYCTCSVMLE
ENEWVVDYALKKRNVKLVPTGLDFGKEGFTSFQKFRFHPSLRLTRRFYPHSHNMDGFFVA
KFKKFSNVIPSAAAGKEEEKTEAPEAPEATDASKQKSSKSDKANKSKAGGLQQNAKANGT
AVRKSANIKSTGQKDSNTGPKKAKIAKMDEEAEKGTEAKKPAGKSPNKPKASKTGKEGGK
FDKKQGKKTKMHMKGKNRMGKNKFKKLKHKWQK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggtcggaagctggatcccaccaacaaggtgaagagagggccggggaagaaagccaaa
aagcagcatggagcagaggttgagttggccaagtttataacagacgaggaagagggatct
aaacgtctgtcaagtagagctaggaaaagagctgcaaaaagagttcagaatgtggaaaag
cctaaagttgttgttgagaaacagcctaagaaaggattcacagatgaaaacagtaaatgg
ttgaaaccaacaaagaggaagcgcaaaatggatgaaccagaaagcgacgatgacagcgag
gatcactgggaagaggaggaggatgaggaagaggaggagaagcagcttatgcagaagaag
aaggaaaagaaaggcgcaaagttgggattgaaaaaactggaagaggaagatgaagacagt
ggtgatgatgatgaagaaatgattgatgactacggcacactcgatgatggcagtgaagac
gaagcagaagggaacagcgatggagaagatctgcttcccattgaacgtgctgccaaaaaa
gagaaaaagctgaaagaatccatggctctagggagtgacgaagatgatgatgaggatgat
gaggaggaggaggatgaggatgatgacgatgatgaagacaaacagaaatcagatgctgaa
gatgaagatgacacgatacagaccaacacagtcgaggtggataagttcagactgccgtca
gcagaggagagtgagaaggagggcatcctgtctctagatctgaagacagttcatcaaaga
attaaggacaacatcgatgttctctgtaatttctctgcgaaaagagaggagggcaaagac
cgagtggagtacatctctctgctgaagaaagacctctgtacttattacagctacaacgag
ttcctcattgagaaattaatggacctcttccctctttcagagctgattgatttccttgaa
gccaatgaaattcagagacccgtcacgattcggaccaacacactgaaaacgaggaggcga
gaccttgcgcaggctttgatcaacagaggagtaaaccttgaccccctggggaagtggtct
aaagtgggtttggttatctacgactcctccgtaccagtcggtgccaccccggagtatctg
gctggtcattacatgctgcagggagcctccagcttcctgccagtcatggcgctctccccg
caggagggagaatcggtgctggacatgagctcggctccgggagggaagaccacctatatt
gctcagctgatgagaaacacaggagtgatcattgccaatgatgcaaacgccgaaagactg
aagagcgtggtgggaaacattcaccgtctcggcgtcacaaacaccttggtctgcaactac
gacggcaggcagttcccaaaggtaatgggcgggtttgacagagtgctgctcgacgcaccg
tgctcaggaactggagtcatcgctaaagatccagctgtgaaaaccagcaaggatgaagca
gatattcagcgctctgctcatttgcagaaggagttgattctgtctgccatcgactctata
aatgcagcgtcccctactggaggatatttgatctactgcacgtgctcagtgatgttggag
gagaatgagtgggtggtggactacgctttgaagaagaggaacgtcaaattagttcccaca
gggcttgacttcgggaaggaaggcttcaccagtttccagaaattcagattccatccttct
ctgcgactcacgcggcgattttacccacattcacacaacatggatggattctttgtggcc
aagtttaaaaagttctccaatgtaattccatctgctgctgctgggaaagaagaagagaaa
acagaagctcccgaggctccagaagccacagacgcttcgaaacagaagtcgtccaaaagc
gacaaggcaaacaagtcaaaagcaggcggcttacagcagaacgccaaagcaaatggaaca
gcggtcaggaaatcggcaaacatcaagtcaacgggacaaaaggactcaaacaccggacca
aagaaggcaaagatcgccaagatggacgaagaggccgagaaggggacagaagctaaaaag
ccagcagggaagtcacccaataagcccaaagcatcaaaaactggcaaagaaggaggaaaa
tttgataaaaagcaaggcaaaaagacgaagatgcacatgaaggggaagaaccgaatggga
aagaataaattcaagaagctgaagcacaagtggcaaaagtaa
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