Kryptolebias marmoratus (mangrove rivulus): 108235461
Help
Entry
108235461 CDS
T05608
Symbol
cicb
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108235461 (cicb)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108235461 (cicb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
108235461
NCBI-ProteinID:
XP_024861522
LinkDB
All DBs
Position
LG16:complement(8917356..8950928)
Genome browser
AA seq
2758 aa
AA seq
DB search
MRPLKKNRRRSPPLTRGRGGKRRGVSQPLQEKDPKRVKKEMLVKTTQHALSTLSKRKHSP
PRTAAISDEEPITNSNINMREEPAELKQPVESDKTDRRKAEEKEKEKLAGTNGNTTNSVA
SPTSAPATLSKAAPSQSTNHSPSLGSVSSRKTATFKARVPKKNYIYEHFAKNASVTNSIS
TSSPSFIVNSYCNTNSKVGVSVNTPNNTLKSSNISNSINKSISMSTNNSTLSNTSSGINC
TTSSSNKCAGSHSTSLNSSNSGSSYCSGNQPSVLTVDSKLTEVNHYVCMKDKTLRTAHPQ
EKDSLAGENELEGIPSSVRSSSTDTASEHSADLDVTEATGPNVHQNCHIVAPLHNSHLKE
GSLSEGLAEALAKGMKNQRVLARQIKRTNKSASSGDSALQSPVFRPGVVRRVTGGTVEVQ
LQGEETLVKYPFYDGTVVTSSSEAENSVDFILDAPPPGMSPVAVGTRVCVPFGGEEGGPL
TYREGIVVQVDPHPGVSFPYQVLLNEDRETLGGGVGQEKEKRKGTGQAVWVSRQSLRLLT
PPWEVSQLDGGRAKESDREREREERERREEMEVEREVCQLSSGMGMLGGGARLGHGFSHE
AVAGGHTYGSVRPPINSSTVTTGVVAVPGHECGNKFSDRERQKQPNTPEEDVEVSHFNMA
HTVGPKANVGTSQHRNIASKSSGYPPTSPQLSLVRGVGPPHLSAITCPQPAPSPASLTTE
ISNSTSNLPPSKTTPTQTPTPTSGVGSSSASSHSRTPLSLAQQKYKKGDVVCTPNGIRKK
FNGKQWRRLCSREGCMKESQRRGYCSRHLSMRTKEIEAAGGEKGGGGSSSGTVTPSDLRG
RTSSEFEWDDTSRESSETSSRGDSRPRLVLPSLLPHELSSRFDFDECEAANMLVSLGSSR
SGTPSFSPISNQSPFSPAPSPSPSPLFGFRPANFSPITASPVLQHRRHRQPSGTGGGGGG
GSKPTTQAGGGERERHASGIQPSIHSNLTFTVPMSPSKRKPDALPPPPLPSHHHDYTPKT
ELEQGDLNNSFRVLSPQTPASHSRTHTPTFPQPKGLNTPSSSRPPSSTAVSSPPLLVSPT
PPSPLTTDGGPRRLVPISQQTLRDSPVIVRNPEVPLAKFSESPLERGGGGGRNEGGVENT
SSKDITLTSLTPQPVTGLQVPVPINAAAATVPNGGTVFLRSPTQTLVLVSPTPSSLPTTD
TSATPLQALSVTVSTTVTAPTPSSTDSSGEREDTRGTGFGGEVQQPVPCHPSPTALLPLI
LPAESLHPVPRKDIIMGRPGTVWTNVEPRSVPVFPWHSLVPFLAPTQSDAPSQPGEGQHP
VNHPQAATLKTDCQGVAALSQEAAETPPTVERDPPSRAPPPCDELLPEKEKGDAEREKPD
SETESDVDDPFLPGVVPEQPLSTSPVKRRTQSLSALPKDGDKNSPGKREKDHIRRPMNAF
MIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDW
KWCNKDRKKSSSEGRGVPGTKDIRERSMSETTEPHSVDLKGVGPGLMGVSERSTGEGHVG
QLTRPRAFSQSAMHSLERGDRGNTQALAELAQMCGDSGSQYSSHAPTPQTQRGVSEDMTS
DEERMVICEEEGDDDVIEDPYPSSSIDLKCKERVTDSDSENASGDEGDRKRVFAPVICSS
ASSSSSHHTPHGRSVSLSSFPSSRRYEGRSGGGGFSDHRRKERGDGESRDTHLVEGGGSV
QASSLSISSSQPVMSTSGAGGAPSSSVGSNQLLGVGAVRVASTVVTNVMRPVISTPLPIA
SKPRDGGPSSSPHPPERRSLTPQQQPQILIGPGAGVGAPATGGGYYPSSSPNPVSAGVGQ
GGVVTNLVLPGALPAQSAVQLITPSPQPQPSHHQALPSNVVSAPHSQTNGPLPLLQPQFL
PASSLAPPVGKAITQVQYILPTLPANSNPKSPPQSLSQPTSIFNLPTAPPAQLANGKHQG
TSLPAGYTSSPAVGVVSPGTRVQTQSPVLQGKMLVSMPTVRTAPAPAQQFPIVAPPLPVQ
NGAQSGSKIFQIAPMPVVQSQLSQGGAVHPASPFPVTMGTAAVVAPGSAPSQAVLLPSAP
TRITYVQSTPGVPSTLPLVSTTTGSSPTQPGSAYVPSPLATLGFTAIAPPGQTLVQPLIA
GQPPLLATAQSPQPSTSASGGQIVTAIYPPSPSVTMATGVVSMAAVPPSVVYSVSSLSST
SPHILPKHTTTPTGATLPHPQPHSDRQVDRHPPPDRSADRSNDRPSDRQAEVLTHLDRQL
ERQTTTSISSSSSAAPPGGSAVSIRSCSPPIQIQAPGSAHKLSQLPVRIPQKVKATVATI
PVGSYDGGGRGKDRERDRERERDRERERERERDRERERDRERERERERDRERERDRERER
DREREREKEREAAANSHFSFDPEPLVETESPSAHPAEELAASDRPLEGSSTADSSDTRSR
DSTTTKEGGWKESLPSSPLPPPSGTELALPPPQSDKDCPTPKRIKARPPPLKKTFDSVDK
TGRVLSEVYFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRRKRKNSTDLDSATD
DQVSPKRKSRRRSSCSSEPNTPKSAAKCEGDIFTFDRAATDGEDILAELEFEKVPYSSLR
RTLDQRRALVMQLFQEQGFFPSAQATAAFQTRYSDIFPSKVCLQLKIREVRQKIMQTAAP
SDASALGPSDSTCSLPGPSGSQSGDGSAKGGGDLQDEELEQGTEASPEDPRDSQDSSR
NT seq
8277 nt
NT seq
+upstream
nt +downstream
nt
atgagaccgctgaagaaaaatagaagacgttctcctccgttaactagaggcagagggggg
aagaggaggggggtctctcagcccctccaggaaaaagaccccaaaagagtcaagaaggag
atgcttgtcaaaaccacgcagcacgcactgagcaccctctccaaacgcaaacacagcccg
ccgcgcacagccgccatctcagacgaagaaccaatcacaaacagcaatatcaacatgagg
gaggagcctgctgagctgaagcaacctgtggagtctgataagacggacagaaggaaagca
gaggaaaaggaaaaggaaaaattagcgggcaccaatgggaatactactaactctgtagcg
tcaccaacctctgctccagcaacactttccaaagccgcaccctcacagtccaccaatcac
agccccagtttaggctcagtttctagtaggaaaacagccacttttaaggcccgtgtaccc
aagaaaaattacatatatgaacactttgctaaaaatgcaagcgttacaaatagcatttct
acctccagtccttcattcatagttaacagttactgcaataccaacagcaaagttggtgtt
agtgtgaatactcccaataatactttaaagagtagtaatataagtaacagcattaataaa
agcattagtatgagcaccaataacagtactctcagtaacacttcaagtggtattaactgt
accacaagcagtagtaataaatgtgctgggagccatagtacttctctaaatagcagtaat
agtggaagtagttattgctcaggtaatcagccatcagtgctaactgtggacagtaaactt
acagaagtgaaccattatgtatgtatgaaggataaaaccctcaggacagcacacccccaa
gaaaaagactcactagctggtgaaaatgaattagaggggatacctagctcagtacgctcc
tcctccacagatacagctagtgagcactctgcggatctggatgtgactgaggcaacagga
ccaaatgttcatcagaactgtcatattgtagctcctctccataactcccacctcaaagag
ggcagtctctcggaggggctagctgaggctctggcgaaaggcatgaagaaccagagagtg
ctggctcgccaaataaagaggaccaataagtctgccagcagtggagactcagccctccag
tcccctgtgtttcgacctggggtggtgcgtagagtgactggaggtactgttgaagttcag
ctccaaggagaggaaacccttgtgaaatatcctttttatgatggaaccgtagtgacatca
tcctcagaagctgaaaactctgtggacttcattttagatgcccctccgccaggcatgtcg
cccgtggctgtcgggacccgggtatgtgtgccatttggtggagaggaagggggtcctctg
acgtacagagagggcattgttgttcaggtggacccccaccccggtgtctcatttccttac
caggtgcttttgaatgaagacagagaaactctgggtggaggggtgggacaggagaaggag
aagagaaaaggaactggtcaggcagtgtgggtttcccgacagagcctgagactactcacc
cctccgtgggaggtctcacagttagatggtgggagggcaaaagagagtgaccgtgagagg
gaaagagaggagagggagcggagggaggagatggaggtagagagagaggtctgccagtta
agtagtggaatgggaatgctgggaggtggagcacggttgggtcatggattctcacatgaa
gcagttgcaggaggacatacttatggaagtgtacgcccacccataaattcctccactgta
accactggtgtcgtggccgtcccaggtcacgaatgtggaaataaattctctgacagagaa
agacagaaacagcccaatactccagaggaggacgttgaggtatctcactttaatatggca
cataccgttggtccaaaagcaaatgttgggacctctcagcacagaaacattgcctctaag
tccagtggataccctcccacctcccctcagctatctttggttcggggtgtaggcccaccc
catctatcagccatcacctgtcctcagccagccccctctcctgcctcactcacaactgaa
ataagcaacagcacttcaaacctacctccatccaaaaccactcccacccagactcctact
cccacttctggcgtggggtcttcctcggcctcctctcattccaggacccccctttcatta
gctcagcagaaatacaaaaagggtgatgtggtatgcacacctaatggcattcgcaagaag
tttaatggaaagcagtggaggaggctgtgctccagggagggatgtatgaaggagtctcag
cgccggggatactgctctagacacttgtccatgaggactaaagagattgaggctgcagga
ggagaaaagggaggagggggcagcagctcaggaacagtcaccccttcagatcttcggggg
agaacaagcagtgaatttgagtgggacgacacatcaagagagagcagtgaaaccagtagc
agaggagactccagaccacgtttagtcctcccttcactccttcctcatgagctgtcgtca
cggtttgattttgatgagtgtgaggctgccaatatgctcgtgtcgttaggaagctcccgc
tctggcactccatccttctcccctatctccaatcagtctcccttttcccctgccccctct
ccctcaccctcgccactgtttggtttcaggccggcaaacttctcacctattactgcgtcc
ccagtcctgcaacaccggagacacaggcagcccagtggcacagggggaggagggggaggg
ggcagtaaaccaacgacacaggctggaggaggagaaagggagagacacgcttcgggcatc
cagccctccatccacagtaacctgacgtttaccgtccccatgagtcccagcaagagaaaa
ccagatgcacttcctccaccccctcttccctcacaccaccacgattatacgcccaaaaca
gagctggaacagggagacctcaacaactctttcagagtgctgtccccccaaactccagca
tcacattcccgcacgcacacacccaccttcccccaacccaaaggactgaacaccccttcc
tccagcaggcccccatcctccactgctgtctcatcccctcctctgctagtgtccccaact
cctccttctcccctgactactgacggggggcctcgacgcctggtccccatatcccaacag
accttgcgtgactctcctgtcattgtaaggaatcctgaggtcccactggcaaagttttca
gagtctcccttggaaagaggaggaggagggggtagaaatgagggaggggtagagaacaca
tcatctaaagacattaccctaacttctcttactcctcaacctgtaactggcctccaggtt
cccgtcccaattaatgccgctgcagccacagtacccaacggcggtactgtcttcttgcga
agcccaacccaaactttggttcttgtgtccccaacaccttcctccctgcccaccaccgac
acctctgccacccccctccaagctctctcagttaccgtcagcacaacagtgacagctccc
accccaagtagcacggacagttctggagaacgggaggacaccagggggactgggtttggt
ggcgaggtccagcagccagtcccctgtcacccctctcccaccgctcttctgcccctgatc
ctcccagcagaaagtctgcaccccgtccctcgaaaagacatcatcatgggacgcccgggc
acagtgtggaccaatgtggagccccggtcagttccagtcttcccttggcattcattggtt
ccttttctggctcccacccaatcagatgctccttctcagccaggagagggtcagcatcca
gtcaaccaccctcaagcagccactttaaagacagattgtcagggggtggcagcgctgtca
caggaggccgcagagacacctcccaccgtagagagagatcccccatcccgggctccccca
ccctgtgacgagctgcttccagagaaggagaaaggagatgcagaaagggagaagccagac
agcgaaactgagagcgacgtggatgaccccttcctcccaggagttgtaccagagcagccc
ctctccacatctccagtaaagagacgtactcagtccctcagtgcacttcccaaagatgga
gacaagaacagcccaggaaagagggagaaggatcacatccggcggccaatgaatgcattt
atgattttcagcaagcgtcatcgagcattagtgcaccagcggcacccaaaccaggacaac
aggaccgttagcaagattcttggggagtggtggtacgctctggggcctaaagagaaacag
aagtaccatgacttggccttccaggtcaaagaggctcactttaaagcccacccagactgg
aaatggtgcaacaaagacaggaagaagtccagttctgaaggtcggggagtcccagggacc
aaagatatcagagagaggagcatgtctgaaactacagagccccattctgtggatctgaaa
ggtgttggtccaggcctgatgggtgtgtctgagaggagtacaggagagggacacgtgggt
caactgactcgccccagagccttttctcaaagtgccatgcacagcctagagcgaggtgac
agggggaacacgcaggctctggcagaactggctcagatgtgcggggacagtggcagtcag
tattcgagtcacgctcctacacctcaaactcagcggggggttagcgaggacatgaccagc
gatgaggagcgtatggtcatctgtgaggaagaaggagatgatgatgtcatcgaggaccct
tatcctagcagctccatagatctcaagtgtaaggagcgggtgactgacagcgacagtgag
aacgcttcaggagatgaaggagatcggaagagggtatttgctccagtcatctgctcctct
gcatcatcgtcttcctcacaccacacccctcatggcagaagtgtctcgctgtcgtctttc
cccagcagcaggcgttatgaggggagatctggagggggagggttctcggatcaccgaagg
aaggaaagaggtgatggagagagtcgggacactcatctggttgagggaggcggaagtgtg
caggcttcttctctctccatctcgtctagtcaaccggtcatgtccacttctggagccgga
ggggctccgtcctcatcagtaggatcgaaccagctcctgggcgttggcgcggtgagggtg
gcctccacggtggtgacaaacgtaatgcgtccagttatcagcacaccgctccccatcgcc
agcaagcccagagatggaggcccctcatccagcccacatcctccagagaggaggtccctg
actccccagcagcagccacagattctgattggtccaggagcaggagttggggccccagca
acagggggtgggtactacccttcatcatcaccaaatcctgttagtgcaggtgtgggccaa
ggtggtgtagtgactaatttagtgttaccaggggctctgcctgcacagtctgctgtacag
ctcatcaccccctccccccagcctcagccatcccatcatcaggcacttccctccaatgtt
gtttcagctccacatagccaaaccaacgggcccctgcccctgcttcaaccccagttcctt
cctgcctcctccctggcaccccctgtgggtaaagccatcacacaagtccagtacattctg
cccaccttacctgctaactccaaccccaagagtccacctcagagcctcagccagccaaca
agtatcttcaacctgcccacagccccgccagcacaactggccaacggaaaacaccagggg
acaagtctgccagcaggttatacgtccagtccggcggtgggcgtggtcagccctggaacc
agagttcaaactcagtctccagtgctgcaaggtaaaatgcttgtttccatgccaacagta
cggactgcaccagcccctgcccagcagtttccaattgtggctcctcctcttcctgtccag
aatggtgctcagtctggaagcaagatcttccagattgctcccatgcctgtggtccagtcc
cagctgtctcagggtggagcagtgcatcctgctagcccattccctgtaacgatgggcacg
gctgctgtagtagctccaggctcggccccttcacaggctgtgcttctgccttcagcacct
accagaatcacctatgtccagtccactccgggggtcccatccaccctgcccctggtctct
acaacaacaggctcttcccccacccagcctggatctgcatatgttccctcacccctagca
acgctcggctttacagccatcgcaccacctgggcagacgctggttcagccgctgatcgca
ggtcagcctccactcttagccacagctcagtccccccagccctccacctcagcctccggg
ggccagatagtcactgccatctaccctccatcaccgagtgtcaccatggcaacaggggtg
gtctctatggcagcagtgccccccagtgtggtctactctgtctccagcctttcaagcact
tctcctcatatcctgcccaaacacaccacaaccccgacaggcgccacgctcccacacccg
cagccccattcagacagacaggtggaccgacacccgcccccagacaggtctgccgatcga
tccaacgacaggccgagcgacaggcaggcagaagtcctcacacatttggacagacagctt
gagaggcagacgacaacctccatcagcagcagcagctcagcagcacctcctggtggctca
gctgtgtccatccgatcctgcagtcctcccattcagatccaagcacctggcagtgctcac
aagttatcacagcttcctgtcaggatccctcagaaagtgaaggcaacggtggcaaccatc
cctgtcggcagctatgatggaggaggccggggcaaagacagggagcgagacagggaacgg
gagagagacagggagcgggaacgggagagggagagagacagggagcgggagagagacagg
gagcgggaacgggagagggagagagacagggagagggagagggacagggagcgggagcga
gacagggagcgggaacgggaaaaggagagggaagctgcagcaaacagtcatttctccttt
gatcctgagccgttagtggagacagagtctccatcagcacatccagccgaggagctggca
gcctctgacagacccctggagggctccagtactgcagactcctctgacaccaggagcagg
gacagcacaacaaccaaagagggtgggtggaaggagtctctcccgtcctctcctctcccc
cctccgtcaggcacagaacttgctctgcctcccccacagtctgacaaagactgccctaca
cccaaaaggatcaaagcccgcccaccaccactgaagaagacctttgactctgttgacaag
actggcagggttctttccgaggtgtactttgaggaacggtttgccgagctgcccgagttt
cgacccgaggaggttttgccctccccgaccctgcagagcctggccacctcacctcgtgcc
atcctgggcagctatcgtcgcaagaggaagaactcaacagatttggattctgccactgac
gaccaagtctccccgaagagaaagagccggcggcgctccagctgcagctccgagcccaac
acgcctaaaagtgccgccaagtgtgagggagacatcttcacctttgacagggcagcgaca
gatggagaagacatcctggcagaactggagtttgaaaaggtgccgtactcctccctgcgg
cgaacgctcgaccagaggcgggcgctcgtcatgcagctgttccaggagcagggcttcttt
ccatcagcccaggccactgcagcattccagacaagatactccgacatatttccctccaaa
gtgtgtctgcagctaaagatcagggaggtgcggcagaagatcatgcagaccgcggctccc
tctgacgcctccgctttaggcccctcagactccacctgctcgctcccggggccttcaggc
tcccagtcaggggacggatccgcaaagggaggtggagacctgcaggacgaagagctggag
caggggacagaggcgagcccagaggatcctcgggactcccaggactcttctagatga
DBGET
integrated database retrieval system
