Entry |
|
Symbol |
tmc4
|
Name |
(RefSeq) transmembrane channel-like protein 4 isoform X1
|
KO |
K21988 | transmembrane channel-like protein |
|
Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
|
Brite |
KEGG Orthology (KO) [BR:kmr00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:kmr02000]
108235496 (tmc4)
03037 Cilium and associated proteins [BR:kmr03037]
108235496 (tmc4)
Transporters [BR:kmr02000]
Other transporters
Pores ion channels [TC:1]
108235496 (tmc4)
Cilium and associated proteins [BR:kmr03037]
Other cilia and associated proteins
Stereociliary proteins
108235496 (tmc4)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
LG16:10800404..10807200
|
AA seq |
689 aa
MIGELERQGLGPTGNDFPGDQEPPRLRRAPSRASDRNYPRYDWSADPAEEEDGAGNAEAP
PEIRTLPWPMERKRAVRQVQQMRAHVSFGAESWRRNKTKSLRKLQQNVREFLYFFSLWRK
SLQKIGGNFGGGVKSYFVFLRFLVVLNFVSFLLIAGFVIAPSLVRRSAGTGGFVNSTDKE
SCLVYDPNPQGLVVFYEFFLHLLSGTGFMEDSFMFYGYYNNNTAVEDGSLSYNIPLAYLF
TAAFYFAFCLCCIIARMGTAARVAVATGGRAIGNYSLIVFTGWDYGCLGDRATKLKQKNI
YYRLQVDLEEERIKKRAASLTPWRKVALYTLRVLMFLIALGLIGTAFYGIFEATKFSQEN
GDRFGILGLFIEYLPSIVITTGNFLVPLLCDQIALLEKYSPSITVVVALLRAVVLRLVSL
GILLFTLWSQITCSGDLEKEDCGNCSYNNKKYQCWETSVGQEMYKLTLFDLLVTIALLVL
VEFPRRMVVDNWSSKLSQLVGRQEFVVPSNVLGLVYGQTVVWTGALFCPLLPLINTIKFV
ILFYCKKITLFCNCRPALKTFRSTTSTFFFLVVLLFGWGLALVAMIYSLAVIHPSYACGP
FRFFTTMWAIVPNSFYSLSEVTQEFLFFIGSQAFSIPLFALSCVVMCYFIALASIYGRSV
AMLKAQLKLEGQDKQFLVKQIEKMKRNNI |
NT seq |
2070 nt +upstreamnt +downstreamnt
atgatcggggagctagagagacaaggcttgggtccaacaggaaatgatttccctggcgac
caggagccacccaggctgcgccgggctccgtcccgggcgtccgatcggaactaccctcgc
tacgactggagcgccgaccccgcagaggaagaagacggggcgggaaacgccgaggcgccc
ccggagatcaggaccctgccttggcccatggagcggaaaagggccgtgaggcaggtgcag
cagatgcgcgcgcacgtctccttcggcgccgagtcctggagacgcaacaagaccaagtcc
ctgcggaaactccaacaaaacgtcagagagtttctttactttttctccctgtggaggaaa
tccctgcagaagattggcgggaacttcggaggcggagtgaagtcctacttcgtctttctc
aggttcctggttgttctgaacttcgtttccttcttactgatcgctggattcgtcatcgcc
cccagcctcgtccgcaggtctgccgggaccgggggctttgtgaacagcacagataaagag
tcgtgtctggtgtacgaccccaatcctcagggcctggtggttttctacgagttctttctt
cacttgctttcaggaacgggcttcatggaggattcttttatgttctacggctactacaac
aacaacacggccgtggaggacgggagcctttcctacaacatccctttggcctacctcttc
actgctgccttctactttgctttttgtctctgctgcatcatcgcacgcatgggcaccgca
gctcgggtcgccgtggcaacgggaggcagggccatcggcaactacagcttgatcgtgttc
accggatgggactacggttgcctgggagaccgggctaccaagctgaagcagaagaacatc
tactatcggctacaggtggacctggaggaggagcgcataaagaagagagcggcctccctc
acgccgtggaggaaagtggctctatacactctgcgcgttttaatgtttttaatcgccctc
gggctcatcggcacggccttctacggcatcttcgaggccaccaagttcagccaggagaac
ggcgacaggttcgggatccttggtttgtttatcgagtatctgccgtccatcgtcatcacc
acggggaacttcctggtgcctctgctgtgcgaccagatcgccttgttggaaaaatattcc
cccagcatcactgtggtggtggcgctgttgagggccgtggtgctgcgtctggtcagtttg
ggcatcctcctcttcaccctgtggagtcagatcacctgcagcggggacttagaaaaagaa
gactgtggaaattgcagctacaacaacaaaaaataccagtgctgggaaacgagcgtgggg
caggagatgtacaagctgacgctgttcgacctcctcgttaccatcgctctgctcgtgctg
gttgaatttccacgcaggatggtggtggacaactggtccagtaagctgtcccagctggtg
ggccggcaggagtttgtggttccctcgaacgtcctcgggctcgtttacggtcagacggtg
gtctggacaggagctctcttttgccctctgctgccgctcatcaacaccattaagtttgtc
atcctcttttactgcaaaaagatcacgctcttctgcaactgtcggccggcactgaagacg
tttcgctccaccacctccaccttctttttcctggtggtgctcctgttcggctgggggctg
gccttggtcgccatgatttacagtcttgcagtcatccatccctcctacgcctgcgggcct
ttccgtttctttaccaccatgtgggcgatcgttcccaactctttttacagcctctctgaa
gtcacacaggagttcctcttcttcattggctcgcaggcgttctccatacctctgtttgcc
ttatcatgcgtggtcatgtgctacttcatcgctttagcctccatctatgggagaagtgtt
gcgatgctaaaggctcagctaaaattggaaggccaagataagcagtttttggtcaagcag
attgagaagatgaaaaggaacaacatctga |