Kryptolebias marmoratus (mangrove rivulus): 108235521
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Entry
108235521 CDS
T05608
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108235521 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108235521 (prpf31)
Spliceosome [BR:
kmr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108235521 (prpf31)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Exo84_C
ATP-synt_F6
Motif
Other DBs
NCBI-GeneID:
108235521
NCBI-ProteinID:
XP_017271081
UniProt:
A0A3Q3A6T3
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Position
LG16:10834995..10843607
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AA seq
507 aa
AA seq
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MSLADELLADLEEAGDEGEDELYPDGEEGDSDGEGTQGRTEGGLEDIPEEMEVDYSKAES
VASIAKLRNSKQFSDIVDKISEYIGKQRKNSDVSGPVEADPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDALDYIRTVKELGNNLEKCKNNETLQQILTNATIMVV
SVTASTTQGSLLSEDELKQLEEACDMALELNQSKHGIYEYVESRMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGFIYHCDVVQSLPPDL
RRKAARLVAAKCTLASRVDSFHESSDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNEATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKESK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcagatgagctcctggctgacctggaggaggctggagatgagggagaggac
gaattgtatcccgatggagaagaaggcgatagcgatggagaggggacgcagggaaggacg
gagggaggactggaggacattccagaggagatggaggtggactacagtaaagctgagagt
gttgcatccattgccaagctccgcaacagcaaacagttttcagacatcgtggacaagatt
tcagaatatataggaaagcagcggaaaaactccgatgtttcaggtccagtcgaggccgac
cctgaatacaggctgattgtcgcggccaataacctcacagtggagatcgacaatgagctc
aacatcattcacaagtttacaagagacaaatactccaagaggtttccagagctcgagtct
ttggtgccggatgcgttggattacatccgcacggtgaaggaactgggaaacaatctggag
aaatgtaaaaacaacgaaacgctgcagcagatcttgaccaacgccaccattatggttgtc
agcgtgacggcatcgaccacacaggggtctttgctaagtgaggatgaactgaagcagctc
gaggaggcttgtgacatggccctggagctgaatcagtctaaacacgggatatatgagtac
gtggagtccaggatgtccttcattgccccgaacctgtccattattgttggagcatcgact
gctgccaaaattatgggtatcgctggcggtctcactaacctttcaaagatgccagcctgt
aacctgatgctgctgggagctcagcggagaaccctgtctggcttcagcagcacgtccctg
cttcctcacaccggctttatctaccactgcgacgtcgtgcagtcgttgccgcctgacctc
aggaggaaggcggctcgtctggtggctgccaaatgtaccctggcttctcgagtggacagt
ttccatgagagttcagacggaaaggtcggctatgatctaaaagaagagatcgagaggaag
tttgataaatggcaggagcctccgccggtgaagcaggtcaaaccgctgccggcgccgctg
gacggacagaggaagaagagaggaggaaggaggtatcgaaagatgaaggagcgcctcggg
ctgacggagatccggaaacacgccaacaggatgaccttcgccgagatcgaagacgatgcg
tatcaggaggacctgggcttcagtctgggtcagctggggaagagcggcagcggccgagtc
cggcaggctcaggtcaacgaggccaccaaggctaggatctccaaatcgctgcagaggacg
ctgcagaagcagagcatgacgtacggagggaagtccacggtcagagatcgctcctcgggc
accagctccagcgtggctttcactcctctccagggcctggagatcgtgaacccacaggct
gccgagaagaaggtggctgaagccaaccaaaaatatttctccaacatggccgagttcctt
aaagtcaagaaggaatccaagtga
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