Kryptolebias marmoratus (mangrove rivulus): 108235535
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Entry
108235535 CDS
T05608
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108235535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108235535
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
108235535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
108235535
NCBI-ProteinID:
XP_017271101
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All DBs
Position
LG16:7801088..7814909
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AA seq
724 aa
AA seq
DB search
MRKPVPQKPALEWKDTRIIKHPRSGRPSRVPSQYQGHFSWEKYLKETGAVAAPSSCFKQS
LTPPVNEFKVGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEI
QPIGSCEKNGGMLQPPLGFRLNASSWPMFLLKTLNGSEMAPSRIFHKQEPPAPEQNSFQV
GMKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCSLTG
DNLQPPGTKAVLPKSLGVLTDGSVESPAMNPTPTVGRPPGQRGRKSGRRKIKVTGSWSQK
ASALVAQSIQSEKGLEPIKIPKKRGPKPGSKLGWAKRAGWLEEAMAGPGRPVTGPGRTRG
RLVASWAQRIALQQAQAQAEPIKIPKKRGPKPGSKRKPRVIPNPVPTSPTSSTPEPDTST
VPQDNATIPNSALQAPTVCVYLNKYGKVGPHLDQRRIQHLPDHFGPGRASSVLQQCVQAC
VDSAYNQGTVFSCLKSGQGGEVISAFFDKQQHTLTLPTVSSVTYVLRFLEKLCHNLHCDP
LFGSQPVARGNLHYDSHSYTTERRSFGNSLSTSPGQSTKRFHKDFNGPLSQKLAKIPRHS
TNGESFSENSVAAPEHLKKISVSPNSPGLTPGLKLLHHNNSTGSGSFRESPRPSSQDPNL
WTVEEVMKYIRDIDPVLAPHADLFRKHEIDGKALLLLRSDVMMKYMGLKLGPALKLTFHI
DKLK
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacctgtgccacaaaaaccagctttagaatggaaagatacccgaataatcaag
catcctcggagtggacggccctcccgggtgccctcccagtatcaaggtcacttcagctgg
gagaagtatctgaaagagacgggtgctgttgctgctccttcttcctgtttcaaacagagc
ctcacacctccagtcaatgagttcaaggtgggtatgaagttggaagcccaagacccgcgg
aacaccacatccacctgcatcgccacagtggtgggcctgacaggatcgcggctacggctg
cgtttagacgggtctgacaataagaacgacttctggcgcctggtggattcctcagagatt
cagccaattggtagctgtgagaagaatggaggcatgctacagccgccactgggtttccgt
ctcaatgcgtcctcttggcccatgtttcttctgaaaacactaaacggttctgaaatggct
ccgtctcgtatttttcacaagcaggagcctcccgccccggagcagaactctttccaggtg
ggaatgaagctggaggcagtggatcggaaaaatccacactttatctgcccagcgacagtt
ggcgcgctgcgtggcgttgaggtgctggtcaccttcgatggatggcgcggggcctttgat
tactactgccggtatgactcgagggacatcttcccggttggttggtgttccctcacagga
gacaaccttcagccgcctggcaccaaagctgtgttgcctaagagccttggggtactgaca
gacgggagtgtggagagcccagcaatgaatcccacgcccactgtgggtagacctccgggt
cagagaggacgtaagtcaggccgcagaaaaataaaagtgacagggtcctggagtcaaaaa
gcttctgcactggtagctcagagcattcaatcagaaaaagggttggagcccatcaagatc
cccaagaaacgaggacctaagcctggcagtaagctgggctgggcaaaaagagctggctgg
ttggaggaggccatggctggcccaggacggccagtgactggaccgggacgaaccagaggc
agactggttgccagttgggcacaaaggatagctctgcagcaagcccaggctcaggcagaa
cccataaaaataccaaagaaaagagggcccaaacctggcagcaagagaaaaccacgagtg
ataccgaatccagtccccacgtctcccaccagcagcactccagagcccgacaccagcact
gtaccccaagacaacgccaccatccccaactctgcactacaggctcccacagtttgcgtg
tatttgaataagtacggcaaggtgggaccccacctggaccagaggcgcatccagcacctt
ccagaccactttggtccgggtcgagcttcctcggttcttcagcagtgtgtccaggcttgt
gtggactctgcctacaaccaggggactgtcttctcctgcctcaagtctggacaaggaggc
gaggtcatttcagccttttttgacaagcagcagcacaccctgacgctccctacagtcagc
agtgtcacctacgttctccgtttcctggaaaagctctgccacaaccttcactgtgaccct
ctgtttggcagccagcctgtagccagaggaaatctgcactatgacagtcactcatacact
acagaaagaagaagttttggaaacagtctgagcacaagcccaggccaaagcaccaagcgc
ttccataaggacttcaatggccccctgtctcagaaactagcaaaaatccctcggcactcc
actaatggtgagtctttcagtgagaacagtgttgcagcaccggagcacttaaagaagatt
tccgtttccccaaattctccaggattgactcctggactcaaactgctgcatcataacaac
tctacaggttcaggcagttttcgagaaagccccaggcccagcagtcaggatccaaatctg
tggactgtagaggaagtcatgaaatatattcgagatattgacccagtgctggctccacat
gctgacctattcagaaagcatgagattgacggtaaagccctcttgttgctgcgcagcgac
gtgatgatgaaatacatgggcttgaaacttggccccgccctcaaactcaccttccacatc
gacaaactcaagtga
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