Kryptolebias marmoratus (mangrove rivulus): 108235595
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Entry
108235595 CDS
T05608
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108235595 (ccdc174)
03041 Spliceosome [BR:
kmr03041
]
108235595 (ccdc174)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108235595 (ccdc174)
Spliceosome [BR:
kmr03041
]
Complex C
Other components
EJC/TREX
108235595 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
108235595
NCBI-ProteinID:
XP_017271192
UniProt:
A0A3Q3GTA1
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All DBs
Position
LG4:complement(14879212..14883012)
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AA seq
535 aa
AA seq
DB search
MDKKKKPLHVAASSLVDLKAELYRKQEQFKREKLGQEAADAGLKAKSTTNKKPNIWSKQN
AGVSARAEKDAEQLAEEQTSLDTSRRKLEEKARLYEQMTKGDFPDEETDALYLVDFTQKI
IDKKREPQLRKEVEKDDEDRDRSSPIPPPENPDEEWVDFVDALGRSRRCMKKDLPSFQKM
DQDLKGKGIAASQKTLLSEDMRRELQRQEWEREEEEAMSRPVGPIHYEDIRAQEARDLGV
GYYAFAQDEEHRRKQRETLDMLRDQTTEQRTKRERLKEKRQSILQARLAKVRQRKMKKAK
LDGSEEEEKEPEENQGKDEEPEMVGPILQSDVPPEVSILKRVEVEIQERRDTKPGVPHVR
EWDRGKEYMFSEWKTRRRDERDSEFAPPSAYFSDEKRPKPAKTKNQENKSSMSFRFAKRP
GGTSESEAEPQPQSPAAPPAPSQPSQPPPADTSPRSAPSFNPQYPPPPPFYPQFPPPPPF
QFAGPPHVLPPFPPQYSYQYPPPFPPPPADQSQAQQPPEGAQSLDEMLSFYRNTT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaacctttgcatgtagctgcatcatcgttagtagacctgaaggct
gaactgtacagaaaacaggaacagttcaaaagggagaaactcgggcaagaagccgctgat
gctggactcaaagctaaatccacaaccaacaagaagcctaatatctggagtaaacaaaac
gctggagtctcagcaagagctgagaaagatgcagagcagctggcggaggagcagaccagc
ctcgacacatccaggcgcaagttggaggaaaaggccaggctctatgagcagatgacaaaa
ggagactttccagatgaagaaacagatgccctgtaccttgttgacttcacccagaagatt
atcgacaaaaaaagagaaccacaactacggaaggaggtggagaaagacgatgaggacaga
gaccgttcgtcaccaatccctcctcctgagaacccagacgaggaatgggttgattttgtg
gacgctttgggacgatctcgaagatgcatgaagaaagacctgccaagtttccagaaaatg
gaccaagaccttaaaggaaagggaatagccgcatctcagaagaccctactgtccgaggac
atgcgtcgagagctgcagaggcaggagtgggagagggaggaagaggaggcgatgagcagg
cccgtcggaccaattcattatgaggatattagagcacaagaggctcgagaccttggtgtg
ggctactacgctttcgctcaggatgaagagcaccgcagaaagcagagggaaactctggac
atgctcagggaccagacgacagagcagcggactaaaagagaacgactcaaggagaagagg
cagtccatccttcaggcccggctagccaaggtgaggcagaggaagatgaagaaggcaaaa
ctggacggcagtgaggaagaggagaaagaaccggaggagaatcaaggaaaggatgaggag
cctgagatggttgggcccatccttcaatcagatgtgccaccagaggtcagcattctcaag
agggtggaagtggaaattcaggagaggagggacactaaacctggagtccctcatgtcaga
gaatgggacaggggcaaagagtacatgttcagcgagtggaaaactcgtcgtcgggatgag
cgagactcagaattcgcccctccctctgcatacttctctgacgagaaaaggcccaaacca
gcaaagactaagaatcaggagaataagtccagcatgtccttccggtttgcgaagcgtcca
ggaggaacctcagagagcgaggccgaaccgcagcctcagtctccagctgctcctccagcg
ccctcacagccttcacagcctccacctgcggacacttccccacgttcagctccctctttt
aacccccagtatccccctccgcctcctttctatcctcagtttcctcctccgcctcctttt
cagtttgcaggtccgccacacgtccttcctccgtttcccccacagtactcgtaccaatat
ccgcccccgtttccacccccgcctgcagatcaaagccaggctcagcagcctcctgaaggc
gctcagagtttagatgaaatgctttccttctacaggaacacaacctga
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