Kryptolebias marmoratus (mangrove rivulus): 108235626
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Entry
108235626 CDS
T05608
Symbol
zgc:113307
Name
(RefSeq) lumican
KO
K08121
fibromodulin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108235626 (zgc:113307)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
kmr00535
]
108235626 (zgc:113307)
Proteoglycans [BR:
kmr00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
108235626 (zgc:113307)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRRNT
LRR_14
Motif
Other DBs
NCBI-GeneID:
108235626
NCBI-ProteinID:
XP_017271232
UniProt:
A0A3Q3G7C0
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Position
LG4:16556784..16561790
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AA seq
367 aa
AA seq
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MALLFLGMLLVLLSGFDTAQTLVVTDMDYGGIPLWINRLLGEPSVLTLQGRVDPGWFRAK
NPQPCPEQCDCPIQWPTSLYCDHRDLKNIPEGLPDRTQYLFLQGNNISSLSSSLLANITG
LRWLIIDNNQLQSDKLERASLQNQTQLRYLFANRNQLTSVPSALPAGLRQLRLAHNRISS
IDPGAFQNLNNLTVLLLQGNRLQIIAEGDLKGLASLYLLDLSGNSFSAVPRHLPPSVQQL
YLSNNSLSGLDEDSFVDLLSLKYLRLSHCRLQSLDVHPQVFNFSSLVELDLAYNTLTSIP
TVPTTLEYLYLEANYIQDFNVTSFCRDVGPLSYSRMKILRLDGNKMTYHQLPPDWVYCLR
VLQKIYI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggctctcctgttcctcggcatgttgttggtgctgctgagtgggtttgatactgcccag
acgctagtcgtcactgacatggactatggaggcattcctctgtggattaaccggctgctg
ggcgagcccagtgttctaactctgcagggtcgggtggaccccggctggttccgggctaaa
aacccccagccctgccccgaacagtgtgactgtcccattcagtggcccacatcgctctac
tgtgaccacagagacctgaaaaacatccctgaagggctgccagacagaacccagtacttg
tttttacagggtaacaacatctcatccctgtcctcctccctcctggctaacatcactggt
ctacgctggctcatcatagacaacaatcagctgcagagcgacaagctggagcgggcctcc
ctgcagaaccagacccagctgcggtacttgtttgccaatcgcaaccagctgacctcagtg
cccagcgctctgccggctgggctcagacagctgcgactggcccacaaccgtatcagcagc
atcgacccgggagctttccagaacctgaataatctgacggtgcttttactgcagggaaac
agactgcagatcatcgcagagggtgaccttaaaggtttggccagtctctacctgctggac
ctcagtgggaattccttctccgctgtccccagacatttacctccttcagtccagcagctg
tatttgtcaaacaactccctctcaggtctggatgaggacagttttgtggacctgctcagc
ctgaagtacctgcgtctcagtcactgtcgcctgcagagcctcgacgttcatccacaagtc
tttaacttctccagcctggtggagctggacctcgcttataacacactgacctccatcccc
acagtccccaccactctggagtacctctacctggaggccaattacattcaagatttcaac
gtgaccagtttctgcagagacgtcggacctctttcctattccaggatgaagatcctacga
ttggacggaaacaaaatgacctaccaccagctcccccccgactgggtttactgtctgcga
gtgcttcagaaaatttacatttga
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