Kryptolebias marmoratus (mangrove rivulus): 108235663
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Entry
108235663 CDS
T05608
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108235663 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108235663 (nelfcd)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
108235663 (nelfcd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
CARD_2
Motif
Other DBs
NCBI-GeneID:
108235663
NCBI-ProteinID:
XP_017271279
UniProt:
A0A3Q3AWZ4
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Position
LG4:16254676..16260834
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AA seq
579 aa
AA seq
DB search
MDEEYYGGAGDWEGPDGNLEDGYDEGESDGKIQEDCLQKFSSRDYIMEPAIFNTLKRYFQ
AGGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQK
ADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSV
STACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQE
EQGGSAVRRISQEVQKSAHERGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADIT
VLFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWK
KNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWV
DWTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLE
LKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQ
LFLPILENDSIAGTIRTEGEHDAVAEFIAHCKSNFIMIN
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagtattacggaggtgcgggcgattgggaaggcccggatggtaacctggag
gatggttatgatgaaggagaaagtgacgggaaaatccaggaggactgtctgcagaaattt
tctagcagggattacatcatggagcctgcgatcttcaacacgctcaaaaggtatttccaa
gcgggtggctcacctgaacatgtcatccaactcctctctgaaaactactctgctgtggct
cagaccgtcaacctgctggctgagtggctcatccagatgggcgtagaacctgcccaggtc
caagagcgagtagaaaatcacctcaagagcctcctcataaagcacttcgacccccagaaa
gcagattctatctttaccgttgagggagagactcctgcttggctggaacagatgatagcg
cacacgacgtggagggacctcttctacaagctggcggaggctcaccccgactgtctgatg
ctcaacttcactgtaaagcttatttcggatgcgggttaccaaggagagatcaccagcgtc
tccacagcatgccagcagctggaggttttctcccgggtgctgaggacgtccttagccacg
ctgctggacggaggggaggaaaacttggagaagaacttgccagaatttgctaaaatggtg
tgtcacggtgagcacacttacctcttcgcccaggcgatgatgtccatccttgctcaggag
gagcagggcggttcggctgttcgtaggatcagccaggaggtgcaaaagtccgcgcacgag
aggggtcacgatgccagtcagataaccctggcgctcggtacggcagcggcctacccacga
gcctgccaggcgctgggtgccatgttgtctaaaggagccctgaatcctgctgatatcacc
gtcctcttcaagatgttcagcagcatggaccctcctcctgtggagctgatcagagtgcct
gcctttctagacctgttcatgcagtcgctgtttaagcctggatcaaaaattaaccaggac
cacaagcacaaatacatccacatcttagcctacgctgccagtgtggtcgagacatggaaa
aagaataagcgagtcaacatcaataaagacgagctgaagtccacctccaaggccatagag
acggtccacaacctgtgctgcaacgagaacaaaggggctacggagctggtggcagaactg
ggcactttgtaccagtgcatcaggtttccggtggtcgctatgggagtcctaaagtgggtg
gactggaccgtgtcagagccgcgctacttccagctccaaacagaccacactcccgtccat
ttagccttactggatgagatctgcacgtgtcaccagctgctgcacccgcaggtcctgcag
cttctcgtcaagctgttcgagacggagcactctcagctggacgtcatggagcagctggag
ctgaagaagacgctgctggaccgaatggttcatcttctgagccgcggctacgtcctgcca
gtcgtcagctacatccgaaagtgtctggagaagctcaacacggacatctccctcattaga
tattttgtcacagaggtgttggatgtgatcgcgcctccctacacatcggacttcgttcag
ctcttcctgcccatcctggagaacgacagcatcgcgggaacgatccgcacagagggcgaa
cacgacgccgtggccgagttcattgctcactgcaagtcaaacttcatcatgattaactga
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