Kryptolebias marmoratus (mangrove rivulus): 108235708
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Entry
108235708 CDS
T05608
Symbol
scn8ab
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit b isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
108235708 (scn8ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108235708 (scn8ab)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108235708 (scn8ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
HpsJ
Motif
Other DBs
NCBI-GeneID:
108235708
NCBI-ProteinID:
XP_017271360
LinkDB
All DBs
Position
LG4:15374140..15419502
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AA seq
2004 aa
AA seq
DB search
MAAPLIAPPGPDSFKYFTPESLANIEKRIQDEKNKKPPKPRSDSSHRDTSDDNEPKPNSD
LEAGKSLPFIYGDIPNGMVATPLEDLDPYYVNQKTFIVLNKGKTIFRFSATPSLYIISPF
NLFRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPDWSKQVEYTFTGIYTFESLTKIV
ARGFAIDNFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLK
TIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINMTNQYLENGSR
GFDWSKYIMNNSNFYFLPNAQDALLCGNSSDSGRCPEGFTCMKAGRNPNYGYTSFDSFGW
AFLTLFRLMTQDFWENLYMLTLRAAGKTYMVFFVLVIFVGSFYLVNLILAVVAMAYEEQN
QATIEEAEQKEAEFKAMLEQLKKQQEETQAAAMATSAGTVSEAALEDVEGGHLSRSSSEV
SKLSSKSAKERRNRKKKWRQKEQEKEKGDSEKVVKSESDDGSKKSTIRFPGSRLGRKTSI
MNQSLLSIPGSPFMSRHNSRSSIFSFKGRSKDMGSENEFADDEHSTVEESEDRRGSLFIP
YRRNSYSGYSQGSSRIHPLAPHSGGKRNSTVDCNGVVSLIGPGPGRRLLPEVKIDKAATD
DSHGRLELSFVDMKCMPLHAPNIAETTDLEIKKKHSGSLMVSVDQLNSSFKGKERANSQM
SVVTNTLIEELEESQRKCPPCWYKFANIFLIWECCPIWLKIKHIVYLIVMDPFVDLAITI
CIVLNTLFMAMEHYPMTPHFQDVLATGNLVFTGIFAGEMFAKLIAMDPYYYFQEGWNCFD
GFIVTLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLV
LAIIVFIFAVVGMQLFGKSYKDCVCKIAESCDLPRWHMNDFFHSFLIVFRVLCGEWIETM
WDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEPNNLQLAV
VRIKNGIAWFKANMRVLVATVLKKPIEEEQKPLDEMYEKKLNCIANHTVDINRELDYPKN
GNGTTSGIGSSVGKYMIDEDYMSFIHNPNLTVCVPIAVGESDFENLNTEDFSSESDIENS
KDLDDTSSSEGSTIDIKPDVEEVAVVEVVEEYLDPDACWTDECVAKYKCCDVPITHGWGK
HWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQRKTVRIILEYADRVFTYI
FILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLIANALGYSDLGPIKSLRTLRALR
PLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYYCFNETAE
EYFKQDQVNNKTECFALINANYTEVRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAA
IDSRKVEDQPIYEDNLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFDFVTQQVFDISIMILICLNMVTMMVE
TDDQSEDTEYVLYWVNFIFIVIFTGEFLLKLFALRHYYFTNGWNIFDVVVVILSIVGMFL
ADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIFSIFGMSNFGYVKHGAGIDDMYNFETFGNSMIILFMITTSAGWDGLLLPILNYPPDCD
PYLENSGTPATGDCGNPSVGIFFFVMYIIISFLIVVNMYIAIILENFSVATEESADPLSE
DDFETFYEIWEKFDPDASQFITYAKLSDFADALEHPLRVPKPNTIELIAMDMPMVSGDRI
HCLDILFAFTKRVLGDSGELDMLRQQMEERFVAANPSKVSYEPITTTLRRKQEDVSARII
QRAYRSYLARRGFVCKRKPATNKPENDGNNQEQEKKEGTPSTASLPSYDSVTKPDKEKQD
DNNEGKGDRKEKGRNQKDIRESQC
NT seq
6015 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaccccttattgcacccccaggacctgacagcttcaagtattttaccccggag
tccctcgctaacatcgagaagcgcatccaagatgagaagaacaagaagccacccaagccc
aggtcggacagcagccaccgcgacacgtctgacgacaatgagccgaagcccaacagtgac
ctggaggccgggaagagcctccccttcatctacggcgacattcctaatggaatggtggca
acgccgctggaggacttggatccatactatgtgaaccagaaaacttttatagtcctaaac
aaggggaaaacaatcttccgcttcagtgccacgccctccttgtacatcataagccctttt
aatctatttaggcggatagctataaagattttgatacattcgttattcagcatgatcatc
atgtgcaccattttgaccaactgtatattcatgacattcagcgacccaccagactggtcc
aaacaagtagagtataccttcacgggtatctatacatttgagtccctcacaaaaattgtt
gcccgaggttttgctatcgataacttcacctttctcagagacccgtggaactggctggac
ttcatggtcatttcaatggcatatataacagagtttgtggaccttgggaatgtctcggcg
ctgagaacgttcagggttctccgagctttgaaaactatttctgtcattccaggcctaaag
accatcgtgggtgctctgatccagtctgtgaagaagctgtcggatgtgatgatcctgacc
gtcttctgtctcagcgtcttcgctctgatcggactgcagctcttcatggggaacctccgg
caaaagtgcgtcatctggccgatcaacatgaccaaccagtacctggaaaatggaagcaga
gggtttgactggagcaaatacatcatgaacaactctaatttctacttcctccccaacgcg
caggatgctctgctgtgtggcaatagttctgactcaggacgatgtccagaaggttttaca
tgcatgaaagctggacgaaaccctaactatggttacaccagctttgacagctttggatgg
gctttcctgacgctcttccgtctcatgactcaagacttctgggaaaatctctacatgctg
acgctgcgagctgcagggaagacctacatggttttctttgtgctggtcatctttgtgggc
tccttctacctggtgaatctgatcttggctgtggtggccatggcttatgaggagcagaac
caggccacaattgaggaggcagagcaaaaagaggctgaattcaaggccatgctggagcag
cttaagaagcaacaagaggagacgcaggctgctgcgatggcaacatccgcaggcaccgtg
tcagaggctgcgctggaggatgtggaaggaggacatttgtcccgcagctcctctgaagtg
tccaagctgagctcaaagagtgccaaagagaggcgcaaccgcaagaaaaaatggcgccaa
aaagagcaggagaaagagaaaggagacagcgagaaggtcgtcaagtctgagtcagacgac
ggcagcaagaaaagcaccatccgtttcccaggaagtcgactggggaggaaaacgtccatc
atgaaccagtcgctgctcagcatccccggctcgcccttcatgtcacgccacaacagccgc
agcagcatcttcagcttcaaaggccgctccaaggacatgggctcggagaacgagttcgcc
gacgacgagcacagcacggtggaggagagcgaggaccgccgaggctccctgttcataccc
taccgtcgcaacagctacagcggctacagccaaggctcgtcacgcatccaccccctggcc
ccccactcaggagggaagaggaacagcacggtggactgcaacggcgtggtgtctctcatc
ggcccagggcccggcagacggcttctgcctgaggtgaaaatagataaggcagccactgat
gacagtcatggacgtcttgaattgtcttttgttgacatgaaatgcatgccactgcatgca
cctaacattgctgagactacagacttggagattaagaagaaacactcgggctctctcatg
gtttctgtggatcagctcaactcctccttcaaaggaaaggagagagccaacagtcagatg
agtgtggtcaccaacacgctgatagaggagttggaggagtctcagaggaagtgtcctccc
tgttggtacaagtttgctaacatctttctcatctgggagtgctgtcccatctggctaaaa
attaagcacattgtctacttgatcgtcatggacccgtttgttgatctggccatcaccatc
tgcattgtgctcaacacccttttcatggccatggagcactacccgatgactccacatttt
caggacgtcctggctactggcaacctggttttcactggcatctttgctggggagatgttt
gccaagctgatcgccatggacccctactattacttccaggaaggctggaactgctttgat
ggcttcattgtgactctgagtttggttgagttgggactggctgatgtggagggcctttca
gttctcaggtctttccgattgttaagagtgttcaaactggccaaatcatggcccaccctc
aacatgctgatcaagatcattggtaactcagtgggtgcactgggtaatttgaccctggtg
ttggccatcattgtcttcatctttgctgtggtgggcatgcagctgtttggcaaaagctac
aaggactgcgtgtgtaagatcgcagagagctgtgaccttcctcgctggcacatgaacgac
ttctttcactccttcctgattgtgttcagagttttgtgtggggagtggattgaaaccatg
tgggactgtatggaggtggcaggacagggcatgtgcttaatcgtcttcatgatggttatg
gttattggaaacctggtggtgttgaacctgtttctggccttgctgctgagctctttcagt
gcagacaacctcgctgccaccgatgatgatggcgagcccaacaacctccagctcgctgtt
gtccgcattaagaacggtattgcctggtttaaggccaacatgcgggtcttggtagccaca
gtgctcaagaagcctatagaagaggagcagaaacctttggatgaaatgtatgaaaagaaa
ctcaactgtattgcaaatcacacagttgacatcaaccgtgaactggactatcccaaaaat
ggcaacggtacaaccagcggcatcgggagcagcgtggggaagtacatgattgatgaggac
tacatgtccttcatccataaccccaacctcactgtgtgcgttcccatcgcggttggcgag
tcggattttgaaaacttaaatacagaagacttcagcagcgaatcagacattgagaacagc
aaagatctggatgacaccagttcatctgagggcagcacgatagacatcaagcctgatgtg
gaggaagtggcagtggttgaagttgtggaggagtatcttgacccagatgcctgctggact
gatgaatgtgtggctaaatacaagtgctgtgatgttcccatcactcacggctggggaaaa
cactggtggttcctgaggaagacctgctacctgatagtagaacacaactggtttgaaacc
cttatcatctttatgatcctgctcagcagtggagccctggcctttgaagacgtgtacatt
gagcagaggaagacggtgcgcatcatcctggagtatgcagatcgggttttcacctacatc
ttcatcctggagatgctgctaaaatgggtggcctatggctttgtcaagtacttcactaac
gcctggtgctggttggacttcttcattgtggatgtgtctatagtcagccttatagctaat
gctttgggctactccgatctaggcccgattaaatcactcaggacactgagggccttgaga
cccctcagggccctgtcacgttttgaagggatgagggttgtagtgaacgccttggtgggt
gccattccctccatcatgaatgtgctgctggtgtgtctcatcttctggctcatcttcagc
atcatgggtgtcaacctgtttgctggaaagtattattactgtttcaacgagacagcggaa
gaatactttaagcaggaccaagtgaacaacaaaacagagtgctttgcactcattaatgca
aattatactgaagtcagatggaagaacgtcaagatcaattttgacaacgtgggtgctggg
tatctggctctcttgcaagtggcaacatttaaaggctggatggacattatgtatgcagca
atagattctagaaaggtggaagaccagcccatctatgaggacaacctgtatatgtacatt
tactttgtcatattcatcatctttggctcattctttaccttaaatctttttattggtgtc
atcattgacaacttcaaccaacagaagaaaaagtttggaggtcaggatatcttcatgaca
gaagagcaaaagaaatactacaatgccatgaaaaaactaggatcaaagaaaccacaaaaa
ccaataccaagacctcagaacaagatccagggcatggtatttgactttgtcacgcagcag
gtattcgacatctccatcatgatactcatctgcttaaacatggtgacgatgatggtggag
acagatgatcagtcagaggacacagagtatgtgctttactgggtcaacttcatattcatt
gtgatcttcaccggcgagttcttactgaagctgtttgcgctgcgtcactattacttcacc
aacggctggaacatctttgatgtggttgtggtcatcctttcaatcgtgggaatgtttctg
gccgacctgatagagaaatactttgtttcaccgacgctcttcagggtgattcgtttggct
cgaatcggcagaatcctgcgtctcatcaaaggtgccaaaggaatccggactctgctgttt
gccctcatgatgtcacttcctgctttgttcaacatcggactcctgcttttcctggtcatg
ttcatcttctccatctttggcatgtccaactttggctacgtgaaacatggggctggaatt
gatgatatgtacaactttgagacgtttggaaacagcatgatcatattgtttatgatcacc
acgtctgctggctgggacggcctgctgttgcccatccttaactaccccccagactgtgac
ccctatctggagaactctggtacccccgccactggagactgtggcaacccatccgtgggg
atcttcttctttgttatgtacataatcatttctttcctaattgtggtcaacatgtacatt
gccatcatcttggagaacttcagtgtggccacagaggagagcgccgacccactcagtgag
gacgactttgagaccttctatgaaatttgggagaagtttgaccctgatgcctcccagttc
atcacctatgctaagctttctgactttgctgatgcacttgaacatccgctgcgcgtcccc
aagccgaacaccatcgagctgattgctatggacatgcctatggtgagtggagaccgcatt
cattgtctagacatcctgtttgccttcaccaagcgtgtgctgggtgacagcggtgagttg
gatatgctgaggcaacaaatggaggagcgttttgtagcagccaatccttccaaggtctct
tatgagccaattaccaccactctgaggcgaaagcaggaggacgtgtctgccaggatcatt
caaagggcctaccgctcctacctggcccggcgaggatttgtatgtaagcgcaaaccagcc
accaacaaacctgagaatgatggtaacaatcaggaacaagaaaagaaggagggcacacca
tcaactgcctccctgccctcttatgacagtgtaaccaaacctgataaggagaaacaggat
gacaacaatgaggggaaaggagacaggaaagagaaaggaagaaaccaaaaagacatcagg
gaatctcaatgttag
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integrated database retrieval system
