Kryptolebias marmoratus (mangrove rivulus): 108235749
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Entry
108235749 CDS
T05608
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4 isoform X1
KO
K26226
liprin-alpha
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108235749 (ppfia4)
Membrane trafficking [BR:
kmr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
108235749 (ppfia4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF1515
Motif
Other DBs
NCBI-GeneID:
108235749
NCBI-ProteinID:
XP_017271445
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Position
LG4:17142840..17216578
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AA seq
1219 aa
AA seq
DB search
MMCEVMPTISEGDSAGPPRGAGGVPNGSEQEANFEQLMVNMLDERDKLLESLRETQETLI
QSQAKLQGALHERDMLQRQINAALPQEFATLTKELNICREQLLEKEEEISELKAERNNTR
LLLEHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVDSHT
PWDFIPLLHINEVEGGKETASVRERLRVALERVATLEGQLAATTRELNMVRQRKDGDSEE
RTDGSKPTWKRLPNGSIDANDDGSRAAELQELLDQTSKELAQSREHSATLNARVAELEAE
LANTRRELSRSEELSIKQQREQREREDLEERITTLEKRYLAAQRETTHIHDLNDKLENEL
ATKDSLHRQSEEKVRQLQEMLEMAEQRLAQTMRKAETLPEVEAELAQRVAALSKAEERHG
NVEERLRQLESQLDEKNQELARARQREKMNEEHNKRLSDTVDRLLTESNERLQLHLKERM
AALEDKNSLIQDLENCQKQLEEFHHTRERLIGEIDKLRNEIDHLKRRSGAFGDGAHPRSH
LGSSSDLRFSVVEGQDGHYSTTVIRRAQKGRLSALRDDPNKVCAMFEQDYPSLRGSVSHL
LGSDIEAESDMEDDVSSALLSPSGQSDAQTLALMLQEQLDAINEEIRMIQVERESADLRA
DEIESRVNSGSMDGLNVTLRPRALPTSATAQSLASSSSPPTSGHSTPKHHGRNTSHHLGI
MTLPSDLRKHRRKVASPVEMDKATIKCETSPPSSPRSLRLETNFAQFTGSLEDGRGKQKK
GIKSSIGRLFGKKEKGRMDQTVGRDGQSLPALTDFDMGIGDTMTLGKLGTQAERDRRMKK
KHELLEDARKKGLPFAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQ
REIGISNPLHRLKLRLAIQEMVSLTSPSAPLTSRTSSGNVWVTHEEMENLASSTKAENEE
GSWAQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRSHLKMVD
SFHRASLQYGIMCLKRLNYDRKELERRREDSQHDMKDVLVWTNEQVIHWAQSIGLREYSG
NLLESGVHGALVSLDETFDYSSLALILQIPMQNTQARQVLEREFNNLLALGTDRRLEESG
DDKSFRRSPSWRKRFRAREGGSGLGMMAGSMETLPAGFRMPSMSMPPSMNLAPRKQLQPE
APPPAPPRLDPSAVRTYSC
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcgaggtgatgccgaccatcagcgagggagactcggccggtcctccgagaggc
gccggcggcgtgccgaacggctccgagcaggaggccaacttcgagcagctgatggtcaac
atgctggacgagagggacaagctgctggagtccctcagggagacgcaggagacgctcatc
cagtcccaggcgaagctgcagggggcgctccacgagagggacatgctccagcggcagatc
aacgccgcgctgcctcaggagtttgccaccctgacaaaggagctaaacatatgtcgggag
cagctcctggaaaaggaagaggaaatatcggagctgaaagctgagaggaacaacaccagg
ctgctgttggagcacctggagtgtctggtgtcccgtcatgaacgcagtctgaggatgacg
gtggtgaagagacaggcaccgccgccatctggagtctccagcgaggtggaggtcctcaaa
gctctgaagtcgctgtttgaacaccacaaggctctggatgaaaaggtggactcacataca
ccctgggactttattccgcttttacacataaatgaagtggaaggggggaaagaaactgcc
tcggtgcgtgagagacttcgggtggctctggagagggtggcaaccctggagggccagcta
gcggcaaccacacgagagttaaacatggtgaggcagaggaaagacggtgattcagaggag
cgaacagatggatcgaaacctacatggaagaggctgcccaacggctctatagacgccaac
gacgacggcagccgggcggccgagcttcaggagctgctggatcagaccagcaaggagctg
gcccagagccgcgagcactccgccacgctcaatgcccgcgtggccgagctcgaggcggag
ctcgcaaacacgcgccgagaactgagccgcagcgaggagctgtccatcaaacaacagagg
gagcagagagagagagaggatttggaggagaggataacgacgttagagaaacggtacctg
gctgctcagcgggagaccacgcacatccacgacctcaacgacaaactggagaatgagctg
gccaccaaagattcgctgcacagacagagtgaggagaaggtgcgccagctgcaggagatg
ctggagatggccgagcaaaggttggctcagaccatgaggaaagctgagaccctgccagag
gtggaagctgaactggctcagagagtcgcagcgctctccaaggcggaggagcggcacggc
aacgtggaggagcggctcagacagctggagtcgcaactggatgagaaaaaccaagagctt
gcaagagctcgtcagagggagaaaatgaacgaggagcacaacaaacgtctatctgacacg
gtggaccgtctgctcaccgagtccaacgagcggctgcagctccatctgaaggagcgcatg
gctgctctggaggacaagaattccctcattcaggacctggagaactgccagaaacagctt
gaagaattccaccacaccagggaacgtctgattggcgagatcgataagctcaggaacgag
atcgaccacctgaagcgccgcagtggagcattcggagatggagctcaccctcggtctcac
ttgggaagctccagcgacctccgcttctctgtggtggagggccaggatggccactacagc
acaacggtgatcaggcgggctcagaagggcagactgtcggcactgagagacgaccccaat
aaggtgtgcgcgatgttcgagcaggactacccgtctctgcgcgggagcgtcagccacctc
ctcggcagtgacatcgaggccgagtcggacatggaggacgacgtcagctcggccctgctc
tcccccagcggccagtcggacgcccagactctcgcgctcatgctgcaagagcagctcgac
gccatcaacgaggagataaggatgattcaggtagagcgagagtctgcagacctgcgcgcc
gatgagatcgagtcacgcgtgaacagcggcagcatggatggtctcaacgtgactctccga
ccccgggcccttcccacctccgccaccgcccagtccctggcttcatcctcctccccgccc
accagcggccactccacgcccaaacatcacggacgcaacaccagccaccatctaggaatc
atgactttgccaagcgacttgaggaaacacagaagaaaagtagcttctccggtagaaatg
gacaaagctactatcaagtgtgagacgtcgcctccttcctccccgcggagcttacggctg
gaaaccaattttgcccagttcacaggcagcctggaggatggtcgaggcaagcagaagaaa
ggaatcaagtcatctatcggccgattgtttgggaagaaggagaagggtcgaatggatcag
actgttggcagggatggacagtctctgccagccttaacagattttgacatgggcatcggt
gacacgatgactctgggaaaactgggaacgcaggctgagagggaccgcaggatgaagaaa
aaacacgagcttcttgaagacgccaggaaaaaaggtcttccgttcgcacagtgggacggt
cccactgtcgtctcgtggctggagctgtgggtggggatgccagcctggtatgtggcggcc
tgtcgcgccaacgtgaagagcggagccatcatgtcggcgctgtcggacacagagatccag
agagagattggcatcagcaaccctctgcaccgcctcaaactgcgcctggccatccaggag
atggtctccctcaccagcccctccgcacctctcacttccagaacgtcctccggaaatgtg
tgggtgactcacgaagagatggagaacctggcttcttccaccaaagcggagaatgaggag
ggcagctgggcacagactttggcatacggagacatgaatcatgagtggatagggaatgaa
tggctgcccagcctcggcctgcctcagtaccgctcctatttcatggagtgtctggttgac
gcccgcatgctggaccacctgaccaagaaggacctgagaagccacctcaagatggtggac
agctttcacagggctagtctgcagtatgggattatgtgcttgaagagactcaattatgac
aggaaagagctggagcgcaggagagaagacagccagcacgatatgaaagatgttttggtg
tggaccaatgagcaggtgatccactgggcccagtccatcggcctgagggagtacagtggc
aacctgttagagagtggcgttcacggcgcgctcgtctccctggatgagaccttcgactac
agcagcctggcgctcatcctgcagatccccatgcagaacacacaggcacggcaggtccta
gagagggagtttaacaacctgttagccttgggaaccgaccgccgactagaagagagtggt
gatgacaagtcatttcgacgctcaccatcgtggcgcaagaggtttcgggctcgtgaggga
gggtcgggtttagggatgatggcgggctccatggaaacgctacccgccggcttccgcatg
ccgtccatgtccatgccaccctctatgaatttggcgccgaggaaacagctccagcctgaa
gctcctcccccagcgcccccaagactcgacccctcggctgtgcggacctactcctgctaa
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integrated database retrieval system
