Kryptolebias marmoratus (mangrove rivulus): 108235773
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Entry
108235773 CDS
T05608
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108235773 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmr03021
]
108235773 (smarcc2)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108235773 (smarcc2)
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108235773 (smarcc2)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108235773 (smarcc2)
PBAF complex
108235773 (smarcc2)
GBAF(ncBAF) complex
108235773 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
108235773
NCBI-ProteinID:
XP_017271489
UniProt:
A0A3Q3BKD3
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All DBs
Position
LG4:complement(15175229..15187197)
Genome browser
AA seq
1049 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSPDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAGVEDAPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTAPYTKSKRGQREEEQEDLSKDLDEASPVPASEEGNTAKTN
NTKKDSDSTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQQMMTFPDKVKEKPVDLQNFGLRTDMYSKKTGSTKTKNGASSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSSSSMGPLAYQPI
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGERPDESTDESKSDSQSNEEKRDAKDNKDGAVEEQEK
QVENGKKEEERGREPEGEREADKTESEMGDGEKEKDAKEGTEEGQREGDIEGERKAKVER
EVGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQTGGPHPTPAA
SVPPPQGPTAGQQAPSTPASQAAPSPAPPSSSAPAPESQPPPAHTSPPCPPGQTPAPQSS
SSTTPVLHESSAPLPGETLHPSAPVPPPQ
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcctctgacacc
gtttcgcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gccgagccccccaccaacaaatccctgtccagcctggtggtccagctgctgcagttccag
gaggaggtgttcggtcggcatgtcagcaaccctcccctcacaaagctgccgatgaagtgt
tttctagacttcaagtcaggaggggctctctgccacattctggctgctgcctacaagttc
aagagtgatcaaggatggcgcaggtttgacttccagaatccatcaaggatggaccgaaat
gtggaaatgttcatgacaattgagaagtccttagtgcagaacaactgcctgagtagacct
gtcatctacctgagtcctgacatcgaaccaaagctgcttggaaaactgaaagacatcatc
aaacggcatcagggctcagtgactgaggacaaggcctccagctcccatgttgtggtgccc
attcctaccagtctggaggaagaggagtgggtgcgccctgtgatgaagagagacaagcag
gttctgctccactgggggtattttccagacagttatgacacctggatccctgccagtgag
attgaggctggagtggaggatgctcccagcccagaaaagcccagaaaggtccacgcgaag
tggattttagacctggaccagtataacgagtggatgaacgaggaggactatgaggtggga
gagggctgtcctaagaggaagaggatttccgccaagacgctcacagatgaggtgaccaca
cctgacgagcggagggataagaaacccggcagcgccaagaagaggaagcgctcgccgtca
ccctcccccacgcctccgcctcaggagagcaagaagaagaataccaaaaaagggccaaca
gctccatacaccaagtctaaacggggtcaaagggaggaggaacaggaggatctgtccaaa
gacctggatgaagcgtcgcctgttccagcatctgaagagggaaacacagctaagaccaat
aacactaagaaagattctgattcaaccccggtcaaaggaggaacagatatggatgagcag
gaggatgagtcgatggaaacaacaggaaaggaagaggaggaaggctctcccagtgtgaag
ggtgaacctgtgaagggctcagaccttcatgaggacaacgtgaccgagcaaacccatcac
atcatcataccaagctatgctgcctggttcgactacaacagtgttcatgccattgagcgc
agagcgctgccagaattttttaatgggaagaacaaatccaaaaccccagagatttatctg
gcttacagaaacttcatgattgacacctaccgactgaaccctcaggagtacctgacctcc
actgcctgtcgcaggaacctggcgggagacgtgtgcgccatcatgagagtccacgctttt
ctagagcagtggggactgatcaactaccaggtggactctgaaagtcggcccactcccatg
ggacccccacccacctctcacttccacgtcctcgcagacactccctcaagcctggtgccc
ctgcagcccaaaacatcgcagactcctgccacccagcagatgatgacgttccctgataag
gtgaaggaaaaaccagtggatctgcaaaactttggactgcggactgacatgtacagcaag
aagactggatctacaaagaccaagaatggagcaagctcaatgcgggaatggacagagcaa
gaaacactactattactcgaggggctggagatgtacaaagacgactggaacaaagtatct
gaacacgtcggcagccgtacacaagacgagtgcatcctgcactttctgcggctgcccatt
gaagacccgtatttggaggacagctcctcgtctatgggcccgctggcttaccagccgata
ccgttcagccaagcaggaaaccctgtcatgagcaccgtggccttcctcgcttctgtcgtt
gacccacgtgtggcctcagctgcagccaaatctgctcttgaggagttttcccgaatgaag
gaggaggtccctgcagcgcttgttgaggctcacgtacggcgggtggaggaagcagcgagg
gtcagcggccgacaggatcctctgtatggcctggagggtagtggcatcgcaggcactggt
ctggaggagggagaaaggcccgatgaaagcactgatgaaagtaagagtgacagccaatca
aatgaggagaagagagatgctaaggataataaagatggagcagtagaggagcaggagaag
caggtggaaaatgggaagaaggaagaggaacgaggacgagaacctgaaggagagagggag
gcggacaaaactgagtccgagatgggtgatggagaaaaagagaaagatgcaaaagaggga
acagaggaaggacaaagagaaggagatattgaaggagagaggaaggcgaaggttgagcgt
gaggtgggagaggggaacctggccactgctgctgcctccgctttggctgccgcagctgtc
aaagccaagcatttggctgcagtggaagagagaaagatcaagtctctggtggctctgctg
gtggagacacagatgaagaagctcgagattaaactgcgacactttgaagaactggaaact
atcatggacagagagagggaggctctggagtatcagcggcagcagctgctggctgaccgt
cagtcgttccacatggagcagctgaaatacgctgaaatgagagctcggcagcagcacttc
cagcagattcagcaccagcagcacagccagacggggggtcctcaccctaccccggccgcc
tcggtcccaccaccccaaggcccgactgcaggtcagcaagctcccagcacaccagcatcg
caggcggcccccagccccgcaccgccatcctcctctgccccagcacctgagtcccagcca
cctcccgctcacacctcacctccctgccccccaggccaaaccccggcccctcagtccagc
tccagcactacacctgtactccacgagtccagcgctcctctgccaggggagacactccac
ccctcagctcccgtccccccgccacagtga
DBGET
integrated database retrieval system
