Kryptolebias marmoratus (mangrove rivulus): 108235849
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Entry
108235849 CDS
T05608
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03420
Nucleotide excision repair
kmr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
108235849 (ercc4)
03460 Fanconi anemia pathway
108235849 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108235849 (ercc4)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108235849 (ercc4)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
108235849 (ercc4)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
108235849 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
108235849
NCBI-ProteinID:
XP_017271589
UniProt:
A0A3Q3BI53
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Position
LG17:11832864..11840228
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AA seq
899 aa
AA seq
DB search
MSGQLLEFETEMFLSLFECDGLLVAAEGLGVDRILLQFMRVYSERDSLVLLLNTTPPEQE
YFTEQLRVEGVSHLPRTVTSDVQSAERYRVYTEGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLFRQKNKTGFIKAFTDKATAFSSGFCQVERVMRNLFVKKL
YLWPRFQASVNTALDRHKPEVVELHVSLTPAMRAIQSSILDLMSACLKELKRYNPTLEAE
DLSLENTLGNGFEKTIRHYLDPLWHQLGAKTKALVQDLKVLRVLLLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSTSMFVNARSRVYRIPESKKKLKVGGDAEKPKSSAASEV
RREPVLEKSPKWEALTEVLEEIEKENKNSEQEPGRVLICASDDRTCAQLQQYIRHGSDWL
LNRLYARTIGKGDSAAAAAFELDSHKKAKSWVKKGSKGKEPAKKNPSKTSKSKSRPSLTL
TQMMGKEEPAEAAVMGSSGDEDDLMEEGDGEEEQLKLDLSSDAYYGVLKEPLTVIHPLKG
CTDPHSLTRVLHEVEPSFVVLYDAELSFVRQLEIYKANRPGKPLRVYFLIYGGSTEEQKY
LTTLSKEKKAFEHLIREKATMVIPEEREGREDTNLDLVRSLEPANATTNTRKAGGQEQSK
EPSRVIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPDTCVERKSVSDLIGSLQSG
RLYTQCLSMTRYYRKPVLLIEFDPAKPFSLMARSDFRNEISSNDVSSRLTLLTLHFPRLR
ILWCPSPHATAELFLELKQGRPEPDASAAQAVTAESETVVESADLYNPGPYDFLLKMPGV
NPKNHRALIKHADSLADVAKLSQNKLAEILGNANNAKLLYEFLHNVADVPAPAQKTKQS
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggcagcttctggagtttgagaccgagatgtttctgagccttttcgagtgtgac
gggctgctggtggcggccgagggtctgggagtagaccgcatcctgctgcagttcatgcgg
gtttactcggagagggacagcctcgtccttctgctcaacacaaccccacctgaacaggag
tacttcacggagcagctgagggtcgaaggtgtgagccacctgcccaggacggtgaccagt
gacgttcagagtgctgagcggtaccgtgtttacaccgaggggggggtcctgtttgtcaca
agcagaatcttggtagtggacttcctcaccgaccgcatccctgctcatctcatctcaggt
atcctggtgtatcgagctcataagatcatcgagtcgtgccaggaggccttcatcctccgt
ctgttcagacagaagaacaaaactggcttcattaaggccttcactgataaggccacagcg
ttctcctctggcttctgccaggtggaacgtgtcatgaggaaccttttcgtcaagaagctc
tacttgtggcccaggttccaagcgtctgtgaacacagccctggacagacacaagcccgaa
gtggtggagctgcatgtgtcattaacaccagctatgagggccatccagagctccatcctg
gacctgatgagcgcctgcctgaaggagctgaaacgatacaaccccactctggaggccgag
gacctgtctctggagaacacgctaggaaatgggtttgaaaagaccattcgtcactaccta
gatcccctgtggcatcagctaggagcaaagactaaagccctggttcaggatctcaaggtg
ctcagggttcttctgctctacctcacccagtacgactgcgttaccttcctcaacctgctc
gagtccctgcgctccagccaaaagaattttggctctaattcaggttggctgtttctggac
tcgagtacctccatgtttgtgaacgctcggagcagagtgtaccgcatccctgagagcaaa
aagaaacttaaagtaggaggggacgcagagaaaccgaagtcctccgcagcctcagaggtg
aggcgagagccggtgctggagaagagtccgaagtgggaggctttgacggaggtgctggag
gagatcgagaaggagaacaagaactcggaacaggaaccaggtcgtgtgctgatttgtgcc
agcgatgaccggacctgtgcccagctgcagcagtacatcagacacggctctgattggctg
ctgaatcgactgtacgcccgcaccatcggtaaaggggactctgccgccgccgctgccttc
gagctggactcgcacaaaaaggctaaaagctgggtcaagaaaggaagcaaaggaaaggag
cctgcaaagaaaaacccctcaaagacctcgaaaagcaagagcagaccctctctgaccctg
acccagatgatggggaaagaggagccggctgaggcggcggtgatgggcagcagcggagac
gaggatgatctgatggaggagggtgacggcgaggaggagcagctgaagttggatctgtca
tcggacgcttattacggcgtcctgaaggagccgctgactgtcatccaccccctgaagggc
tgcaccgacccccacagtctgacccgggtgctgcacgaggtggagcccagcttcgtggtg
ctgtacgacgcggaactgagctttgttcgccagctggagatatacaaagcgaaccggccc
gggaagccacttcgagtgtacttcctgatctacggaggctcgacagaagaacagaagtac
ctgacgacgctgtcaaaggaaaaaaaggcgtttgagcacctcatcagagaaaaggctact
atggtcatcccagaggagagggaggggcgagaagacaccaacttggacctggtcagaagt
ttagagcccgccaacgccacaaccaacacccgcaaagcaggaggccaggagcagtccaaa
gagccctctcgagtcatcgtggatatgcgggagttccgcagcgagctgccttctttgctt
caccgccgcgggctggacatcgagcccgtcaccctggaggtgggggactacatcctgacg
ccagacacctgcgttgagcgcaagagcgtcagcgacctgatcggctcgttacagagcggc
cgcctgtacacccagtgcctctccatgacgcgctactacagaaaaccagtgctgctcatc
gagtttgacccggccaagccgttttccctgatggcccggtccgatttccgcaacgagatt
tcatcgaatgacgtttcttcgcggctcacgttactcacgctgcatttcccccggctgcgg
atcctgtggtgcccctccccacacgccacggccgagctcttcctggagctgaagcaaggc
cgccccgagcctgacgcctcagcagcccaggctgtcacagctgagtcagagactgttgtt
gaatcagcggacctctacaaccccgggccttatgacttcctgttgaaaatgccgggggtt
aatccaaaaaaccacagggctctcataaaacatgctgacagcctggcagacgtagccaag
ctcagccagaacaaactagcagaaatacttgggaatgctaataatgctaagttgctgtat
gagtttctgcataatgttgctgatgttcctgctcctgcacagaaaaccaaacagtcttga
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