Kryptolebias marmoratus (mangrove rivulus): 108235885
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Entry
108235885 CDS
T05608
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04382
Cornified envelope formation
kmr04510
Focal adhesion
kmr04512
ECM-receptor interaction
kmr04518
Integrin signaling
kmr04810
Regulation of actin cytoskeleton
kmr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108235885 (itgb4)
04518 Integrin signaling
108235885 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108235885 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108235885 (itgb4)
04810 Regulation of actin cytoskeleton
108235885 (itgb4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108235885 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kmr04147
]
108235885 (itgb4)
04515 Cell adhesion molecules [BR:
kmr04515
]
108235885 (itgb4)
04090 CD molecules [BR:
kmr04090
]
108235885 (itgb4)
Exosome [BR:
kmr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108235885 (itgb4)
Exosomal proteins of bladder cancer cells
108235885 (itgb4)
Cell adhesion molecules [BR:
kmr04515
]
Integrins
Integrin beta subunits
108235885 (itgb4)
CD molecules [BR:
kmr04090
]
Proteins
108235885 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_integrin
EGF_Teneurin
EGF_2
Interfer-bind
I-set
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
108235885
NCBI-ProteinID:
XP_017271666
LinkDB
All DBs
Position
LG17:8968044..9004131
Genome browser
AA seq
1944 aa
AA seq
DB search
MGRWTLRLLVGVGLLAILLACCYAEVNYCFASRAKSCSECLQAGVGCAYCSEEAFNGPRC
DMYNNILAHGCSEAAVIKAESSMEITKKRKINMNIQQSQVSPQSASMTFLPGEEKFMDVE
VFAPTKGPLDLYILMDFSNSMKDDLENLKKMGNILATLGKNVSNDYKIGFGKFVDKVIEP
QTDMRPSKLEKPWPNSDPPFSFQHVIKLTENIESFIQKLQKERISGNLDAPEGGFDAILQ
ATVCKDEIGWRDFSTHLLVFSTESAFHYEADGMNVLSGILPRNDELCHLDPEGKYTKATE
QDYPSIPALIRLLGEHNIIPIFAVTNHSYIHYSKLKEYFPIAEVGLLQEDSSNIAEVIKT
AFDSIRSKMSIRAENRPKAFDAQFLSTKGEIAQYGAFNVKPGEIGRFQMKLKAQRMINKE
LVCDMDSKDKAGTIHVKPTTFSAFTEVKASVLCPTCDCEKISVNKAPRCHHHGDLVCGRC
QCYDGWLGTFCNCSASASALDTNQCIGPGMTEPCSGRGDCLACGTCVCYNPDQFEGPYCQ
YDKTQCQRFAGFLCNDRGSCVMGQCSCADGWEGPACECPKSNQTCLDSKGLVCGGRGKCV
CGVCECLNSDIEMSAACEPNFQFQLGVCEGTRSCAQCLAWKTGEMKDECDKCPFKVKMVD
ELKEREKVLDACSFRDEEDDCTYQYTVEQSEDPTVNELMVEMLKKKDCPGAGLLWLLPLL
LFLLLLLALLLLCCWKYCACCKACWQSCLALLPCCGRGRMVGFKEDEYLLRQSLLTSDHL
DTPMVRTGPPKGTDVVRWKVTDNVQRAANHPQALIKPNPNEMIQFPVSLRLNRLFSENLS
RPETRDAEQLRMEVAENLNELYKQIPGAQKVQQTSFRQQKNAGKRQDFTIMDAVLPAPRS
TYQDIIKLTEKNVQSGNFSDLKVVPGYYTVASDREAAGAVEFQEDVESVDVHVPLFVKDE
DDDKKLLRVEATDVPLGIAEIGKRIVNITIIKEHTTSIFSFLQPSYTYSRQDGVANIPIH
REILEDGRTQVTYRTRDHTAKDKKDYLNVEGDLSYGPGETQKVVPVRLLELNERDALLED
KQVKQFVMDLSNPRQGAKLGRYPRTTVTITDLPEPGVIMFKKGTQNFSTSDPSYTIPVVR
TRNQDSPATVKWRTKKAQRFDLSGPLMFSPGETEKNIVIDPRTHPGPIQPETFHLELYDP
STNAMIGERKTTLVNVTDEVSRSPEIAQMQNKGYINQKATSPGGRLLSPENLKAKATGPR
NIHLNWDPPPGNPQGYKVKYWIYGDPEKYAEILDVKTPQAELTNLYPHCDYEMRVCAYNT
KGDGHNTDMVSCQTLEDIPGEPGRLAFNVISPTVTQVSWAEPAETNGDITAYEVIYTPID
DEQKPVGAAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAKNSVGWGPYRDATINLASQPT
RPMSIPIIPDVPIVDAEAGDEYDSYLMYSNDVLKSPTSSKTPSVSGDDYMMNGKWDQNFL
FPGGVSTRNMSSSSSPMSTLGSNYRGAGGSFTTETHTTYISGPGSPRRQEVIGGGLHTSE
VTMRKRSENRSYTDEHIRDSIVMGDLSSNFSDLTPSGGFSYSGLQSSSQSQFSYSLSQGS
RTRNDSTDVNEALYSLDRVLQDARLSPGVPETPSRLVFSALGPTALKVSWQEPRCEKDIL
GYSVVYQLLNGGETKRINVTNPAENSVIIHDLLPNHSYLFKVKAQSQEGWGPDREGVITI
ESAVDPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYKVTC
EQVHGGGDERTFQVNGDSPETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQD
GGALSQYNSQSMMRREVFNMPTEVTTRTNISHTMLNDPHFSDGMVMTTQHTESGGMVSRQ
ITREVVQRSVTGGSTVTKRMFYES
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacgtctcttggttggagttggccttctagccatcctcctggcc
tgctgttatgctgaagtgaactactgcttcgcttcccgggccaagtcctgctcagagtgt
ctgcaggcaggagtaggatgtgcctactgttctgaagaggcttttaatggtcctcgctgt
gacatgtataataacatccttgcccacggctgcagtgaggctgctgtcatcaaagctgaa
agcagtatggaaatcaccaaaaagagaaagattaacatgaacatacagcagtctcaggtg
tcgccacaatctgccagcatgacttttctgcctggggaagagaaatttatggatgtggag
gtgtttgctccaaccaaaggccctctggatctttatattcttatggacttctcaaactcc
atgaaggatgatctggagaacctgaaaaaaatgggcaacatattggctactctggggaag
aatgtgtcaaatgactacaaaatcgggtttggaaagttcgtagacaaagtgatcgagccc
cagactgacatgagaccttccaaactagaaaagccgtggcccaacagcgaccctccgttc
tcttttcaacatgtcatcaaactgacagaaaacatagagtctttcatccagaagctgcag
aaggagaggatatcaggcaatctggatgcccctgaaggaggatttgatgccattttacag
gcaaccgtgtgcaaggatgaaatcggatggcgcgatttcagcacgcacctcctggttttc
tccaccgagtcggcctttcactacgaggctgacggcatgaacgtgctgtcgggaatcctg
ccgcgcaacgatgagctctgccaccttgacccggagggcaaatacacaaaagctacagaa
caggattatccatcaatacccgcgctaatccgtctgttgggagaacacaacatcatccct
atctttgctgtcaccaaccactcctacatacactacagtaaactgaaagagtacttcccc
atcgctgaggttggtctgcttcaagaagactcctccaacatcgctgaggtcataaagact
gccttcgatagtattcgatctaagatgagtatccgtgccgagaacagacccaaggctttc
gatgctcagttcttgagtaccaaaggggagattgcacagtacggcgcctttaacgtcaag
cctggagagattggaaggtttcagatgaagctcaaagcccagcgaatgatcaacaaagag
cttgtctgcgatatggactccaaagacaaagctggcacaatccatgtcaaaccgacgact
ttcagcgcttttaccgaagtgaaagcctccgttttatgtccaacctgtgactgtgagaag
atatccgtcaacaaagcaccaagatgccatcaccatggtgacttggtgtgtgggaggtgc
cagtgctatgatggctggctgggaaccttttgtaactgctcagcaagtgcttcagctctg
gacacgaatcaatgcattggtcctggcatgacggaaccttgttcaggccgcggagactgt
ctggcatgtggaacctgcgtgtgctacaacccggatcagtttgaaggtccctactgtcag
tatgacaagacccagtgtcaaagatttgctggcttcctctgcaatgaccgcggctcctgc
gttatgggtcagtgttcgtgtgcagatggctgggaggggcccgcctgcgagtgtcccaaa
agcaatcagacctgcctggacagcaaagggcttgtgtgtggtgggcgaggtaaatgcgtg
tgcggcgtctgcgagtgtctaaactctgatatcgagatgtcagcagcctgtgagccaaac
ttccagtttcaattaggcgtgtgtgagggaacgagaagctgtgcccagtgtctggcgtgg
aagacaggagagatgaaagatgagtgtgacaagtgcccgttcaaagttaaaatggtagat
gaactgaaagaacgggagaaagtgctggacgcttgcagttttcgtgatgaggaagacgac
tgcacgtaccagtacacagtcgaacaaagtgaagatcccacagtgaatgagttgatggtt
gagatgctgaaaaagaaagactgtcccggtgctggtcttctgtggttgctgcccctcctc
ctcttcctcctgttgctgttggcactcctgctgctttgctgctggaagtactgtgcctgc
tgcaaagcctgttggcagagctgtctcgccctgctgccttgttgtgggagaggtcgcatg
gttggcttcaaggaagatgagtatttgcttcgtcagtctctgctcacctcagaccatttg
gacacaccaatggtgaggaccggcccacccaaaggaaccgacgtagttcgctggaaagtc
acagataacgtacagcgcgccgctaatcatccccaggctctaataaaacccaacccaaac
gagatgatccagtttcccgtctccctccgactcaacaggctgttctcagagaacttgtct
cgccccgaaacaagagatgctgagcagcttcgcatggaagtggctgaaaacttaaatgag
ctgtacaagcagatacctggggcacagaaggtgcaacagacctcattcagacaacagaaa
aatgcaggaaaaaggcaggacttcaccatcatggatgcggttttgcctgctcccaggagc
acctaccaagatataattaaactcactgagaagaatgttcagtctggaaacttcagtgat
ctcaaagttgtgcctggatactacactgtagcttcagacagagaggctgctggggctgtg
gagttccaagaggacgtggagtcagtagatgttcatgtgccactttttgtcaaggatgaa
gatgatgacaagaagctgctccgagtggaggccaccgatgtgccactgggcatcgcagag
atcggaaaacgtatagtcaatatcaccatcatcaaagagcataccaccagcatcttctcg
ttcctccagccaagttacacctacagcaggcaagatggggtcgccaacattccaatccac
agagagatcctcgaggatggacgcacacaggtcacctaccgtacacgggatcacacagcc
aaggataagaaggattatctgaatgtcgagggagacctctcctatggtcctggtgagact
cagaaggtggttcctgtccgtcttctggagctgaatgaaagagatgccttgttagaagac
aaacaggtcaagcagtttgtcatggacctcagtaacccacggcagggcgccaaacttgga
cgctacccaagaaccactgtcaccattacagacctaccagaaccaggtgtgatcatgttc
aagaagggcacccagaacttcagcacatcagatccaagctacaccatccctgtggtccgc
actcgcaatcaagacagtcccgctacagtgaaatggcgcaccaagaaagcgcagcgcttt
gacctttctggccccctcatgtttagtcctggagaaacagaaaagaacatagtgattgac
ccaagaacccaccctggtccaatccaaccagaaacctttcacctggagctgtatgaccct
agtaccaatgctatgataggagagcggaagaccacccttgtcaatgtgacagatgaagtt
tcaagatctccagaaatagcccagatgcaaaacaaagggtacataaaccagaaagccaca
tcccccggtggccgccttttgtccccagagaacctaaaggctaaagcaactggtcccaga
aacatccatctcaactgggatccaccacctggtaatccacagggatacaaggtgaagtat
tggatctatggtgacccagagaaatatgccgaaatcttagacgtaaaaactcctcaagct
gagctgacaaacttgtacccccactgtgattatgagatgcgagtgtgtgcctataacaca
aagggagatggccacaataccgacatggtttcctgtcaaacactggaagacattcctggt
gaacctggtcgcctggctttcaatgtcatcagccctactgtcactcaggtcagctgggca
gagcctgcagagaccaatggcgacattacggcatacgaggtcatctatacgccaatcgat
gatgaacagaagccggtgggagcagctaagaaagtgaagattgacaatcctaagaaacgg
atgctgttgattgaaaacctccaaagtgcccaaacttaccagtacaaagtccgtgccaaa
aacagcgtgggctggggtccctacagagacgctaccattaatttggcatcacagcctacc
agaccaatgtccattcccatcattccagatgttcctattgtggatgcagaggcaggagat
gagtatgacagctacctgatgtacagcaacgatgtgcttaaatcaccaacaagctccaaa
acgccaagtgtctctggagacgattacatgatgaatgggaagtgggaccagaacttcctt
ttccccgggggggtgtcgacgcgcaacatgtcatcatcgtcctctccgatgtccaccctg
ggctccaactacagaggagcaggaggctccttcaccacagagactcacaccacctacatt
tctggacctggaagccctcggagacaggaggtgatcggaggaggcctgcacacatccgag
gtcaccatgaggaagcgctcggagaacagaagttacacagacgaacacatccgggactct
attgtgatgggagacttgtcgagcaacttctcagatcttacgccatccggtggcttcagc
tactctgggcttcagagcagctctcagagccagttcagctacagcctgtctcaggggtcc
agaaccaggaatgattctacagatgtgaatgaggccttgtacagtctggacagagtgctc
caggatgctcggctctctcctggtgtgccagaaactcccagcagactggtgttttctgct
ctgggaccaacagcgcttaaagtcagctggcaggagccacgctgcgagaaggacatcctg
gggtactctgtcgtctaccagctgctcaatggaggtgagacaaagcgcatcaacgtgaca
aacccagcagagaactctgtgatcatccacgacctgctgcccaaccactcctacctgttc
aaggtgaaggctcagagccaggagggctggggtccagatcgagagggggtcatcaccatc
gagtcggctgtggaccccaagagccccctcagccccatgccgggctccccgttcactctg
agtactcccagtgctccgggccctctggtgttcacagccctgagcccagactcgctgcag
ctcagctgggagaaacctcgtaaacccaacggagacatcctgggctataaggttacctgc
gaacaggtacacggtggaggtgacgagcgtactttccaggtaaatggtgacagccctgag
accagtctgacagttcccaacctgaccgagaacgttccatataagttcaaggttcaggct
cgaaccacgcagggcttcggccctgagagggagggcatcatcaccatcgagtctcaggat
ggaggtgccttatctcagtacaacagccagtcgatgatgaggagggaggttttcaacatg
ccgacagaagtcacaacgcgaaccaacatctcccacaccatgctcaacgacccccatttc
tcagacggcatggtgatgacgacgcagcacaccgagagcggtggcatggtgagccgtcag
atcaccagagaagtggttcagaggagcgtcacgggaggatctacggtcaccaagagaatg
ttttatgagtcctaa
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