Kryptolebias marmoratus (mangrove rivulus): 108235962
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Entry
108235962 CDS
T05608
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03440
Homologous recombination
kmr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108235962 (brca2)
03460 Fanconi anemia pathway
108235962 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108235962 (brca2)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108235962 (brca2)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108235962 (brca2)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
108235962 (brca2)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108235962 (brca2)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
108235962 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
108235962 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
108235962
NCBI-ProteinID:
XP_017271805
LinkDB
All DBs
Position
LG2:complement(6078879..6092495)
Genome browser
AA seq
3025 aa
AA seq
DB search
MYDAFKDEIWKELGQLDPNWFEVLTARASSSERIVADKDDLCANQEGNFKTPLEKTAGDS
QLFSTPKVFRHSRIVSPETEDEPSFTAAQGRGSLPWMATQSPCLSQASGKGVPGEKSEGV
EPHSEDSFDLLRTPNKSSINYAKHISESLGAQINPDISWTSSLNTPPAVPSTLILSKTDE
SPCPLSVTEDRNFVFVRKLFPSLSKASSVEVPKNKAVPSVSQGAVSSETQNCLQPSINQT
EDVWQQTLPDAVDEEEVCGQVEENLDGAENVDSVFFANSSSALRKVKPDRIKCKQVIQTN
DKSCSSKDTTVPHSSPSSEAATADLESGRLPSTPLAKPGVPAVSQWSPLSLSEIPPCALE
SSVVTERQQSDTDSVQLFRPSVKITNSGLIKKKRQFVYTIPTSKTQVPEKGYWSQKMDPP
FGVSDSGQEVNVKPLEKGSGESECCSTKRSTVQNQRRVVGENIPCFGGAKVQDFDMSQLC
KEFAQDFSQVAIFGQQDKVAKDTFNDFSPSACLSSMKQAKQKARQAEPLRETDGISNRRQ
TCSLSHDSVSDSGLQSGAADITYMTASSVLPHSENIDQSQQCVTTSFPPIKEETGNEHLE
SEAKTTLQKLKERQTLDPERESESHIENKSMCQSSRTEGVVDRSDCIPLSGQICDSLPKE
TDISLSSAYSSGFRTASDKGIHIPSANLEKAKRLFEETEGERTFCTQSTKYDHSKHKVSL
NNRSLPSKMSTSNQPSHLEEAAGNISSQLTASEKADVTELCSLLEEADSQFEFTQFKTAK
LKWQDQNEANPSQKPDRELDPDFLAGINFDDSFNSDGGKHSAVTVIPDKMALVSDQSVDK
SSSAAITKENSSVARLSENISEDKNGLMLAGANNAHHRAECGEANKLDNSNPLTLGVAFK
TAGGNMLRVSKEFLCKARALFADLEGNVTDQKPPDKQNVQSDAKTDQNCDMDSDMCKEDS
KFTFKDNCHVEESIRNSFPKTEEFVSSNKQVLSVGDEDCTKSLKNSKMDTQMFQSDFRMA
GGKEISISTKYLQQASAFFRDCDVIGHKDNMSHKKNTKAPPESVENKKSFSKCTNLQVNT
SDEHVAGCSNFENVYAGLIALPTKELRVDEVSMSNNGLLALKDAESFHGNPFMTSEPFSP
PCTSNNIDLSAIDHLNTVDGFCTASGKKVSVSADAMRKAECLLNQICTYEDIKKENAKTT
GDQSDDGLKAENTGFQTSSGKEVAISPSALKKKALLKECERDEDEMSFSLPHPKGKVPVT
GPPMWNSGFSAASGKPVVVSSEALQRAKMIFTDISLNVDTPTVSNTIRNDEKCTCAQDNT
EKRPCGFTTAGGAKVQVSQKSLLKAKEIFKEYDDLALTKAMQEADAFFDCDVDGSKIITE
AKKDDVDVSEGVRSKEGDLSKLCPHQTVRVNTFEEPRISSAECTSKQGNQREETLPQQNG
GFQTASGKRVNISSEALKNAKTLLSDCEGVENEISVNPPQSRVSVLPCRSSGFVSGSGKP
VKLSSEALQKATALFSDISFHSEIPDISRTTKSDKKQNGGTSTEKIHCGFTTAGGAKVHV
SEKNLLKAKLLFEEFDNSAKTSLDADVSSLKENDCTVSSNSKALFSEGHHLNESLFKLKP
AARNVFEAENGFTKGINEQVNQQEGALLQQGGGFQTASGKAVAVSSEALTRAKILLNENE
GAEDNIRVSSPVSKIPISETFLLKSGFSSASGNPVKFSSEALQKAKVLLSDTSLSTNIPT
SADTKRTDEKHDAQSKAEDIHRDVMTAGGKVHVSEKRVLKAAHLLKEFADGEFDCSFSNS
TSPQSTLKLDLPKAKDVERTNVVPVRDRDIHAKRRDPCEVSSFSTTTGADNINDILEESS
LLDINQSSSKRAEPLRTDESSNLNLQSLNLTGCTETQHRFLAQEALDCTKALLEDEVLAG
QSLSVTSEATPLPDDLKSNNRSTEDGKRRKRLLEDADVIGQPHPKRPLLDKFDRTVNSPK
GSALHPVKCCPNGAIKDRGVFKYSASLHPNITKPLSGSKHYKDTRLQKTTLPHCSSPGDG
RLSHSKMLPFVPPFVRNVKREIPNTPELKGNTRTPVFVPPFKKQRTVLQDSSSKQHEEDK
QVLPSAVESGSNTYVPPAIKSQSTTAVVASGCTENLNIARVPVNCDVISSKAEASVADDS
FSKNQDGHQNIELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVARISLKVAVNGKKPS
RYNPEQLYEYGVQKNVSEFTNETAESFRFNLLQFVKRETFIDGDGVHLADGGWLVPSNDW
TAGKEEFYRALCDTPGVDPKLISEAWVYNHYRWIVWKQASMEKSFPETMGSRCLTPEQVL
LQLKYRYDVEVDHSCRPALRKIMEKDDTASKTLILCVCEIVSRGPSPNRQGRSDTKAPQS
ADAKADMSCAEVRLTDGWYAIRAQLDEPLTAMLHKGLLTVGVKLIIHGAQLMGSQDACSP
LEAPESLFLKICANSSRRAQWDAKLGFHRDPRPFLLPLSSLYSNGGPVGCVDIIVLRSYP
IQWMERKADGSVVFRSARAEEKEARRYNHHQQTAMETLFAKIQAEFEKEEKGNNKPQWRT
HSINRQDIASLQDGEELYEAVGDDPAEAHLSERQLETLHAYRRSLMEKMQVELQDRYRRA
LEADDNKLSCPKRDVTAVWRLYIADSKAQSNRVYQLNLWRPSSDLQSLLKEGCRYKVYNL
VASCGKKRSGIETVQLTGTKKTQFQDLQASQEWLSDYFQPRVSTNFVNLQNAEFQPLCGE
VDLTGYVISIIDEQGSSPAFYLADGKLNFVKVRCFSGLSQAGLEDVIKPRVLLALSNLQL
RGQSLHPTPVVYAGDLTVFSTNPKDVHLQESLSQLKTLVQCQDNFFQSAEEKLSLLVKSD
GMRSICSPSLQPQTPDSRKQDSKSSVTFQKPVPSLGSFTPVSRKPPAETASSEKDSKTLK
RKRALDYLSRIPSPPPLSHLASAVSPYVKKTFNPPRRSGPPSAFKSAQTPVQKPTNSLVE
KEWVNDEELAMIDTQALLEGDMTVC
NT seq
9078 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgcgttcaaggatgaaatctggaaagagctgggccaattagacccaaactgg
ttcgaagtactaacggctcgagcgtcttccagtgagagaatcgttgccgataaggatgac
ctgtgtgccaaccaagagggaaattttaaaacacctttagagaaaacagcaggagacagt
cagctgttttcaacccccaaagttttcagacacagtcgaattgtgtcacctgaaactgag
gatgagccgtcgttcacagctgcacaagggagaggatcgttaccatggatggcaacacaa
agtccgtgtttatctcaggcgtcaggaaagggtgtcccgggtgagaaaagtgaaggtgtc
gagcctcacagtgaggacagttttgatttactccgtacaccaaacaaatcctcaatcaac
tacgccaagcatatttctgaaagcctcggggcccagatcaatcccgacatttcatggaca
agttctctgaatacaccaccggccgtgccatccaccctgattttatctaaaacggatgag
agtccctgtccgttgagcgtcactgaagacagaaactttgtttttgtacggaagctcttc
ccttcactttcaaaagcctcctcggttgaggtcccaaaaaacaaagccgtgccttctgtt
tcccaaggtgctgtgtcttctgagacccaaaactgccttcagccttctataaatcagacc
gaggatgtttggcaacaaactcttccagacgctgttgatgaagaagaagtttgtggccaa
gtagaagaaaatctcgatggagctgaaaatgttgactcagttttcttcgccaacagtagt
tcggctctgagaaaagtgaaacctgacagaatcaaatgtaaacaagtcattcaaacaaac
gataagagctgcagctctaaggataccacagtaccacacagttctccatccagtgaagca
gcaacagctgatctagaatctggtagattaccctcaaccccactggcaaaacctggagtt
cctgcagtcagtcagtggtctcctttaagcttatctgaaatcccaccttgtgctttggag
agcagtgttgtgactgaacgacagcaaagtgacacagattctgtccagctcttcaggcca
tcagtaaaaatcacaaactctggactcatcaagaaaaagagacaatttgtttatacaatt
ccaacttcaaaaacacaagttccagaaaaaggatattggtctcagaagatggacccacca
tttggagtttcagattctggacaagaagtgaatgttaaacctttggagaaaggctctggt
gaatcagagtgctgcagcacaaaaaggagcactgtccaaaatcagagaagagtcgttgga
gaaaacatcccctgctttggaggagcaaaagtccaggattttgacatgtcgcagctttgc
aaagagtttgcacaagactttagccaagtggcaatttttggccagcaggataaagtagca
aaggatactttcaatgacttctctccttcagcctgtctctcatccatgaaacaagcaaag
cagaaagcaaggcaagctgagcctctccgtgaaactgatggcatcagtaacagaagacag
acttgctcccttagtcacgactctgtaagcgacagtggattgcagtctggtgctgcagac
atcacttatatgactgcctcatcagttcttcctcactcagaaaacattgatcaaagtcaa
cagtgtgttactacttcttttccacctataaaagaagaaactgggaacgaacacctggaa
tcggaagcgaaaaccacattgcagaaactcaaagaaaggcagacactggaccctgaaaga
gaaagtgaatcacatatagagaacaaatcaatgtgtcagtccagcagaacagaaggagtt
gttgatagaagtgactgtatcccattaagtggtcagatttgtgacagtctgccaaaggaa
actgacatttctctctcttctgcctattcatcgggattcagaactgcttcagataaaggc
atacacatcccctctgccaatctggagaaagccaagcgtctctttgaagaaactgaaggt
gaaagaactttttgtactcaatccaccaaatatgaccactctaagcataaagttagcctg
aataataggtctctgccaagtaaaatgtctacctcaaaccagccatctcatttggaagaa
gcagctggaaatatcagttctcaattaacggcttcagaaaaagctgatgtgacggaactg
tgctccctcttagaagaagcagacagtcagtttgaatttacccagttcaaaactgcaaaa
ctaaaatggcaagatcaaaatgaggccaatccttcacaaaaacctgacagagaacttgac
ccagattttcttgctggtataaattttgatgacagctttaattcagatggtggaaagcac
tctgcagtcactgtgatacctgacaaaatggccttggtttcagatcagtctgtagataaa
tcatcatcagctgcaataacaaaggaaaattcctctgtagctcgtttgtcagagaacatt
tctgaagataaaaatggtctcatgttagctggagccaataatgcccaccacagagctgag
tgtggagaagcaaacaagctggacaacagcaatcctttgacacttggtgttgcatttaaa
acagcaggaggaaatatgttgagagtttccaaggagtttttgtgcaaagcaagggctttg
tttgcagatttggagggaaatgtgacagatcaaaaaccaccagacaagcaaaatgttcaa
tctgatgccaaaacggatcaaaactgtgacatggactctgatatgtgcaaggaagattca
aagttcaccttcaaagataactgtcatgttgaggagagcattcggaacagttttcccaaa
acagaggagtttgtatcatcaaacaaacaggtcctgagtgttggagatgaggattgcacc
aaaagtttgaaaaatagcaaaatggacacacaaatgtttcaaagtgatttccgcatggct
ggtgggaaagaaatctctatttcaacaaaatacttgcaacaagcaagtgcttttttcaga
gactgtgatgtcattgggcataaagataacatgtctcacaagaagaacacaaaagctcca
cctgaaagcgttgagaacaagaaaagcttttcaaagtgcacaaacctacaggtgaacacc
tctgacgaacatgttgcgggctgctctaattttgaaaatgtgtacgctggactgatcgca
ctccccacaaaagaactgcgcgtggatgaagtgagcatgagtaataatggtttgcttgct
ttgaaagatgcagagtccttccatggaaacccatttatgacttcagagccattttcccca
ccttgcacatcaaacaacattgatttgtctgccattgatcacttgaacactgttgatgga
ttctgtacagccagtgggaagaaagtctctgtgtcagctgatgcaatgagaaaggctgaa
tgtcttttgaatcagatttgtacatatgaggacataaaaaaagaaaatgcaaaaactaca
ggagatcagagtgatgacggtttaaaagcagaaaatacaggatttcagacatctagtgga
aaagaagttgccatttcaccatcagctctaaagaaaaaagctttattaaaagaatgtgaa
agagatgaggatgaaatgagtttttcattaccacatcccaaaggaaaggttcctgttact
ggtccaccaatgtggaattctggtttttctgcagccagtggtaaacctgtggtggtgtca
tctgaggccttacagagggccaagatgatcttcactgacatcagtttgaatgtagatact
ccaactgtttccaacacaataaggaatgatgaaaaatgcacatgtgctcaagataacaca
gagaaaaggccctgtggatttacaacggcagggggggcgaaagtccaggtatcacaaaag
agtcttttaaaagccaaagagattttcaaggaatatgatgatttggctttaaccaaagca
atgcaagaggcagatgctttctttgactgcgatgtggatggcagtaaaataatcacagaa
gccaagaaagatgatgtggatgtgagcgagggtgtgaggagcaaggagggagatcttagc
aaactttgtccacatcaaactgtgagagtaaacacttttgaagaacccagaataagttct
gctgagtgcacaagcaaacaagggaaccaaagagaagagaccttaccacaacaaaacggt
ggatttcagacagccagtggaaaacgagtcaatatctcatctgaagctttaaagaatgca
aaaaccttgttaagtgactgtgaaggagttgagaatgaaataagtgtaaatccaccacag
tccagagtcagtgttctgccatgcaggagttctggctttgtttctggcagtggtaaacct
gtaaaactttcatctgaggctcttcagaaggcaaccgctctcttcagtgatattagtttt
cattcagaaatcccagacatttcacggacaacaaaaagtgacaagaaacaaaacggtggt
accagtacagagaaaatacattgtggtttcacaactgcaggtggagctaaagttcatgtg
tcggaaaagaatcttctgaaagcaaaacttctttttgaagaatttgacaattcagcaaaa
accagcctggatgcagatgtttcctctttaaaggaaaacgactgcacagtaagcagcaac
agtaaagctcttttcagtgaaggtcaccacttgaatgaaagcttatttaaacttaaaccg
gcagcaagaaatgtttttgaggctgaaaatggattcactaagggcataaatgaacaagtg
aaccaacaagaaggcgctttacttcagcaaggtggtgggtttcagactgccagtggaaaa
gcagttgctgtatcatctgaagctctgacgagagcaaaaatcctgttaaatgaaaatgaa
ggagctgaggataacatccgtgtttcatcgccggtttccaagattcctatttctgaaaca
tttcttttgaaaagtgggttttcttcagccagcggtaatcctgtaaaattttcatctgag
gccttacaaaaggctaaagtattactcagcgacaccagtttgagtacaaacatcccaact
tctgctgacacgaagaggactgatgagaaacatgatgctcaaagtaaagctgaagatata
caccgtgatgtcatgactgcaggaggaaaagtccatgtttctgagaaaagggttttgaaa
gcagcacatcttttaaaagaattcgctgatggggagtttgattgttccttctcaaactca
acaagtccacaaagcacactgaaactggatctaccaaaagcaaaagatgtggaaagaact
aatgttgtccctgtcagggacagggatattcatgcaaagagaagggatccatgtgaagtt
agctcattttccaccacgacaggagcagacaacataaatgacattcttgaagagtcaagc
ctgttggatattaatcaaagctccagcaagagagccgaacctttaagaacagatgagtct
tcaaatctaaacctgcagtcactaaacctcactggatgcacagaaactcagcacaggttt
ctggcacaggaagctctggactgcacaaaggctctgctagaagatgaagttctcgctggc
cagagtctctcagtgacttcagaagctacaccgctgccagatgacctgaaatccaacaac
agatctacagaggacgggaaaaggaggaaaagattattggaagatgctgatgtcataggt
cagcctcatcctaaaagacctttactggacaaatttgacagaactgttaatagtccaaaa
ggttcagcgctccatcctgtaaaatgctgtccaaatggtgcaataaaagacaggggagtt
ttcaagtacagtgcttcactacatccaaacatcacaaagccactcagtggttcaaaacac
tacaaggacacaagattacaaaagacaacattaccacactgttcatccccaggagatggc
agattatcacactccaagatgttgccatttgttccaccatttgtcagaaatgtaaaaaga
gagattcccaacactccggagcttaaaggaaacacaagaacgcctgtgtttgttccacca
ttcaaaaagcaaagaactgtcttacaagacagttcctctaaacaacatgaggaggataaa
caagttcttccctctgctgtagagtccggcagcaacacatacgtaccacctgctataaaa
tctcaaagcaccacagctgtagttgcttcgggttgcactgaaaacctaaatattgcaaga
gttcctgtaaactgtgatgtaatcagttctaaagcagaggcatccgttgcagatgactcg
ttttccaaaaatcaagatgggcatcagaacattgagttggcacgggatatgcaggacatg
aggatccgaaaaaagaagcgccagaccattcgacctctaccagggagcttgtttctaaca
aagacttctggagtggcaaggatctcgttaaaagtcgcagtgaatggaaagaaaccatca
agatacaacccagaacagctttatgaatatggagtccaaaagaatgtttcggagttcacg
aatgagactgcagagtcttttcgcttcaatttgctgcagtttgtcaaacgggaaacgttt
atagatggagatggtgttcaccttgctgatgggggatggttggtcccaagcaatgattgg
accgcagggaaggaagaattttatagagcattatgtgacactcccggtgtggatcccaaa
ctgatcagtgaggcgtgggtgtacaatcactacaggtggatcgtgtggaagcaggcctcc
atggaaaagtcttttccagaaacaatggggagccgatgtctcactccagagcaggttctt
cttcagctgaagtacagatatgatgtggaggtggaccacagctgcaggccagctctgagg
aagatcatggaaaaggacgacacagcctccaaaactcttatcttatgtgtttgtgagatc
gtttccagaggtccctctccaaacaggcagggtcgcagcgacacgaaagctccacagagc
gctgatgccaaggcagatatgtcatgtgcagaggtccggctcacagatgggtggtatgcc
atcagagctcagctggatgaacctttgactgccatgcttcacaaaggactgctgactgtt
ggtgtcaagctgatcatccacggggctcagctaatgggatcacaagatgcttgttcccct
ctggaggcacctgaatccctctttttaaagatctgtgccaacagcagcagacgtgcacag
tgggatgctaagctgggatttcatagagacccgcggccattcctgcttccactctccagt
ttatatagcaacggagggcctgtaggatgtgtcgatattattgttctgagaagctacccc
atacagtggatggagaggaaggcagatggaagtgttgtgttccggtctgctcgagcagaa
gagaaggaggcaagacgatacaaccatcaccaacaaacagctatggagacgctctttgcc
aagattcaagctgaatttgaaaaagaggagaaagggaacaacaaacctcagtggagaact
cattcaatcaaccgtcaagatattgcaagtctccaggatggagaggagctgtatgaagca
gttggagatgacccagctgaggcccacctgagtgaacggcagttggaaactcttcatgcc
tacagacgttcactgatggagaagatgcaagttgagctgcaggatcgatatcgccgagct
ttagaggcagacgacaacaaactgagttgtcccaaaagggatgtcacagccgtgtggaga
ctctacattgctgactcaaaggcccaatctaaccgtgtttatcagttgaatctttggcga
ccttcctcggatcttcagtctttattgaaggaaggttgtcgatacaaggtttataacctt
gtcgcttcatgtggaaagaaacgaagtgggattgaaacagttcagctcactgggacaaag
aaaacacagtttcaggacctgcaggcttcccaggaatggctgtcagactatttccaacca
agagtctccacgaactttgtgaatcttcaaaatgcagaatttcagcccctgtgtggagaa
gttgatctcacaggatatgttattagcatcatagatgaacagggttcctctcctgcattt
tatttggccgatgggaagctgaactttgtgaaagtacgctgtttcagtggtttatctcag
gctggccttgaagatgtgataaaaccacgtgtccttttagctctgagcaacctgcagctc
aggggtcagtctttacatccaactcctgttgtgtacgctggagatctgacggtcttctcc
acaaaccccaaggatgttcatctccaggaatccctcagccaactcaaaaccctggtccag
tgtcaagacaacttttttcaaagtgctgaagaaaagctttcacttttagtgaagtctgat
ggcatgaggtccatctgttctccatctttgcaaccacagaccccagactccagaaaacaa
gactcaaagtcaagtgtgacatttcagaaaccagtcccgagccttggatcttttacaccc
gtcagcaggaagcctccagcagaaacggcttcatcagaaaaagactccaaaaccctgaaa
agaaaaagagctctggattatctgtctcgtatcccgtctccaccacctctctctcatctg
gcctccgccgtctctccatatgtaaaaaaaacatttaacccccctcggaggtctgggcca
cccagcgctttcaaatcggctcagactccagtccaaaaacccaccaactccctggtggag
aaagaatgggtgaatgatgaggaactggctatgattgatactcaggctctgcttgagggg
gacatgactgtatgttga
DBGET
integrated database retrieval system
