Kryptolebias marmoratus (mangrove rivulus): 108236048
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Entry
108236048 CDS
T05608
Symbol
wipi2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2
KO
K17908
autophagy-related protein 18
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04136
Autophagy - other
kmr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108236048 (wipi2)
04136 Autophagy - other
108236048 (wipi2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108236048 (wipi2)
03029 Mitochondrial biogenesis [BR:
kmr03029
]
108236048 (wipi2)
Membrane trafficking [BR:
kmr04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
108236048 (wipi2)
Mitochondrial biogenesis [BR:
kmr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108236048 (wipi2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
DUF7165
Beta-prop_Vps41
Beta-prop_TEP1_2nd
BCAS3_WD40
Beta-prop_IFT140_1st
VID27
Motif
Other DBs
NCBI-GeneID:
108236048
NCBI-ProteinID:
XP_017271964
UniProt:
A0A3Q3AX91
LinkDB
All DBs
Position
LG12:16076912..16085050
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AA seq
427 aa
AA seq
DB search
MNLASQSGDAGGSQLLFANFNQDNTSLAVGTKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMI
PAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
EGLYLSASSNTETVHIFKLETQKEKYVPAEEPTTWGGYLGKVLMASTTYLPSQVTEMFTQ
GRAFATVRLPFCGHKNICALAVIQKIPRLLVAAADGYLYLYNLDPQEGGECTLMKQHRLD
SSTEPPNEILEQGSHDRPLVAQTYSAAVTKGYCEEQGAVGGAGLEEDLNDLRLEEENEQP
PLILETD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggccagtcagagcggggatgctggcggaagccagctcctcttcgccaacttt
aaccaggacaacacgtccttagctgttggcaccaaatcgggatacaagtttttctccttg
tcctcagtggacaaattggagcagatatatgaatgtactgacacggaggacgtgtgcatc
gtggagcgtctgttttccagcagcctcgtggccatcgtgagcctgaaggcgcccaggaag
ctcaaagtctgtcacttcaagaagggaactgagatctgcaactactcctactcaaacacc
atactggctgtgaagctcaacagacagaggctgattgtgtgtctggaggagtcgctttac
atccacaacatcagagacatgaaagtgctgcacactatcagagagaccccacccaaccct
tcagggttgtgtgccctctccatcagcaacgataactgttacctggcgtacccgggcagt
gcaacgataggagaggtccaggtgttcgacacggtcaacctgcgggcagcaaatatgatt
ccagcccacgacagcccgttagcagctctggcgtttgacgccagcggcaccaagctcgcc
acagcttcggagaagggcacagtcatccgtgtcttctccatcccagaggggcagaagctc
tttgaatttcggcgaggcgtcaaaaggtgcgtgagcatctgctcgttggcgttcagcatg
gaaggcctgtacctttccgcctccagcaacacagaaacggtccacattttcaaattagag
acacagaaggagaagtacgtgccggcagaggaacccaccacatggggaggctacttgggg
aaggtcctgatggcgtccaccacctacctgccgtcgcaggtcacggaaatgttcacccag
ggacgggccttcgccaccgttcgcctgcctttctgcgggcacaaaaacatctgcgcctta
gctgtgattcagaagatccccaggctgctggtcgcagccgccgacggatacttgtacctg
tacaacctagatccccaggagggaggagagtgcacgctcatgaagcagcacaggttagac
agcagcaccgagccccccaatgagatcctggagcagggctcacatgatcgccccctggtg
gcccaaacctatagtgcagccgtcactaaaggttactgcgaggaacaaggcgccgtgggc
ggggcggggctcgaagaggacctcaacgacctgcgcttggaggaggagaacgagcagccg
ccgctcatcctcgaaaccgactga
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