Kryptolebias marmoratus (mangrove rivulus): 108236144
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Entry
108236144 CDS
T05608
Symbol
sox10
Name
(RefSeq) transcription factor SOX-10 isoform X1
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108236144 (sox10)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108236144 (sox10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108236144
NCBI-ProteinID:
XP_017272104
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All DBs
Position
LG12:complement(16716879..16724673)
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AA seq
493 aa
AA seq
DB search
MSREEQSFSEVESDDSRSLSPGHSSGAAGGSDSPLPGRQPQLAALQDDASAGCSSVRSED
EDERFPAGIREAVSQVLNCYDWTIVPVPVRVNAGSKSKSHVKRPMNAFMVWAQAARRKLA
DQHPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPDYKYQPRRRKNGKP
GSSSGSENDGHLEGEVSHNQSHYKGLHLEVVHSGGAGSPLADEHHPHAAGQSHSPPTPPT
TPKTESQSGKSGEGKREGVGNGGSRGTLGAQGGSGASGSGKPHIDFGNVDIGEISHEVMA
NMEPFDVDEFDQYLPPNGHPGVGQIGGAGGAAAASPASPYTYGISSALAAASGHSAAWLS
KQQQQPQQHHSSPLGSDPSKAQIKSEAGGAGGHFVEAASAGTHVTYAPLSLPHYSSAFPS
LASRAQFAEYAEHQASGSYYGHSGQSSGLYSAFSYMGPSQRPLYTAITDPTSVTQSHSPI
HWEQPVYTTLSRP
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagaggagcagagcttctcagaggtcgagtcggacgacagccggtccctgtca
ccgggtcactcgtccggcgctgcgggcggcagcgactccccgctgcccgggcggcagccg
cagctggcggcgctgcaggacgacgcgtccgcgggctgctcgtccgtgaggtccgaggac
gaggacgagcgcttccccgccggcatccgcgaggcggtgagtcaggtgctcaactgctac
gactggaccatcgtgcccgtgcccgtgcgcgtgaacgcgggcagcaagagcaagtcgcac
gtgaagaggccgatgaacgccttcatggtgtgggcgcaggcggcgcggaggaagctggcc
gaccaacacccccacctgcacaacgcggagctcagcaagaccctggggaagctgtggagg
cttctcaatgagagcgacaagcggcccttcatcgaggaggcggagaggctgaggaagcag
cacaagaaggattacccggactacaaataccagccgcggcgccgcaagaacggaaagccc
ggttccagttcaggaagtgagaacgacggccatttggagggtgaggtcagccacaaccag
tcccactacaagggtctccacctggaagtggtccacagtgggggagccgggtcccctctg
gcagatgagcaccaccctcatgctgcaggtcagagccacagtcctcccacgcctcccacc
actcctaaaactgagtctcagtccgggaagtcaggggaaggtaagagggagggtgttggg
aatggggggtcccgtggaacactgggagcacaaggaggctctggtgcctctggatccgga
aaacctcatattgactttggtaatgtggacattggtgagataagccatgaggtgatggcc
aacatggagccttttgacgttgacgagtttgaccagtacctccccccgaacgggcaccca
ggggttgggcagattggaggggcaggaggagctgcagcagcctctccagcctccccgtac
acctatggcatctcgtcagctctggcggcggccagcggacactcagcagcctggctctcc
aagcagcagcagcagccgcagcagcatcacagctcccctctgggctcggacccttccaag
gcacagatcaagagcgaggctgggggtgctggaggtcactttgtagaagcagcctcggca
ggtactcatgtcacctacgccccactcagcctgcctcattacagctctgccttcccctcg
ctggcctcaagggctcagtttgcagaatatgctgaacaccaggcctccgggtcgtactat
ggccactccggccagtcctcagggttgtactcagccttctcctacatgggaccttcccag
aggcccctctacactgccatcactgacccaaccagtgtgacacaatcgcacagccccata
cactgggagcagcccgtctacaccacactgtcgcggccatga
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integrated database retrieval system
