Kryptolebias marmoratus (mangrove rivulus): 108236237
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Entry
108236237 CDS
T05608
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X2
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108236237 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108236237 (usp43b)
Enzymes [BR:
kmr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108236237 (usp43b)
Peptidases and inhibitors [BR:
kmr01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108236237 (usp43b)
Ubiquitin system [BR:
kmr04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108236237 (usp43b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
108236237
NCBI-ProteinID:
XP_017272254
UniProt:
A0A3Q3AKZ4
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All DBs
Position
LG12:complement(17526846..17609861)
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AA seq
1225 aa
AA seq
DB search
MEKPSRLDREEDMPPPREERRRDKKPKPGRLFRRRSLKSVGSFVNRIVKTLGTFAHFGDD
ADARDAEDDDGGFRASNGASCTLGAGSGIAAAQQQHQQQPVRDRPARTPPSTSSSLCAGG
DKLQHQYGDKSPGVLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLERYRMDLGPSRRNGL
VVGEVKGEVTEHLAALVRALWTLEYTPQLSVDFKTVVSKYGSQFRGNSQHDALEFLLWLL
DRVHEDVMLASHNNNNKTRAPGKGPSGAEEALRPDPIQSQQPRVQHSFVQEHFQAQYKSS
LTCPHCLKQSNTFDPFLCISLPIPLRQTRPLCVTLVFSTKGQRYLRVGLAVPLFGSVAGL
RRMVADEGKLSPDQVILTEVYSTGFQRSFFDEDDLTSIAENDVIYAFQAPPLYIRGGSAR
ISGYHHSLPSSPYSTGPEGQRLPSSGALSSEFLNHGVPVKILLLVCNAAGAGQQTARFGP
PFLMREDRSISWDQLQQSILSKLYYLMINGAPAQNTRVLFNIRVVGGSPFYSYLSPQDGR
PLFHPAVDRALKLCGSGGPPHVKLIIEWEHRVKDCLFGNIHEEVVKDADNVRNLQQQHVQ
QFSCTLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVG
ERRNKLTTFVHFPLAGLDMTPHMVSRNSGLQQVPLQPGWRHSRRAELAPPDFLYDLYAVC
NHHGGMHGGHYTAFCRNSVDGQWYSYDDSSTEPVPEAEVCTRGAYILFYQKRSTIPPWSA
SSSVTGSTSSSFTDHWLVRLTGGSERGSVVSGGTKPAALKAMQASESPELPVFRDESIKR
AETNGSGVNQLVRGTQVRSLSMRSPTKPKDTLSKVLPLRWSFGSKDRIRHSVPTQSGELV
EYLESGRRPRCTKDPIVALVATPPLRNSRGRVLEVGQDCSSPSGSSLSCTDRLSSDTSYS
PKIPEGQSRPCLERNLSHGSGTGSHIKFRDDDSLRQGSTKRPRTDQVRALDLQLQRGAIL
GGHISHSAPPSRDSTLKRTVVQTGGTSRGQKDLVQVGVQTLDKKEHRGEEARSQDGLLPV
LKSALVKKDIPRSPFKEQDRRMNSHGHLGKLANSNLAKFSFSNGTLPAVQQDDKRGFIIP
SCDPQNCKTHLVNGKAGIQEPVDIKRAHSSSNIETKLDLTFRRCASLQRNGEVVVPPSHR
VLLSDKTGCSTLQRTRYSTTSLVPM
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaccgagcaggctcgacagggaggaggacatgccgccgccgagggaggagagg
cgcagagacaagaagcccaagcccgggaggctgttccgcaggaggtcgctgaagtcggtg
gggagcttcgtgaacaggatcgtgaaaactttgggcactttcgcccactttggagacgac
gccgacgcgcgggacgcggaggacgacgacggcgggttccgggccagcaatggcgcatct
tgcaccctgggcgccggctctgggatcgcggcggcgcagcagcagcaccagcagcagccg
gttcgggaccggccggcgagaacccccccgagcacgtcctcgtctctgtgcgccggcggg
gacaaactccagcaccagtacggggacaaaagccccggcgtgctggggctgaagaaccac
ggcaacacctgcttcatgaacgccgtggtccagtgcttgagcaacaccgacctgctggcc
gagtacctggggctggagcggtaccggatggacctgggtccgagcaggaggaacgggctg
gtggtcggggaggtgaagggggaggtcacggagcacctggcagctctggtccgggctctg
tggactctggagtacaccccacagctgtcagtggacttcaagactgtcgtgtccaagtac
gggtcacagtttcgtggtaactcccagcacgacgccctggagttcctcttgtggctgctg
gatcgtgtccacgaagacgtcatgctggcgtctcacaacaacaacaacaagaccagagct
cctggaaagggtcccagcggggccgaggaggcgctgcgtcccgacccgatccagtcccag
cagcccagggtccagcacagtttcgtccaggagcatttccaggctcagtacaaatcttcg
ctgacgtgcccgcactgcctgaagcagagcaacaccttcgacccgttcctctgcatctcc
ctgcccattcctcttcgtcagaccaggccgttgtgtgtcactctggtgttcagcaccaaa
ggacagaggtacctgcgggtcgggctggcggtgcccctttttggttctgtcgctggcctg
aggaggatggtggctgacgaggggaagctttcccctgaccaggtgatcctgacagaggtt
tactccacagggttccagcgctccttctttgacgaagacgatctaacgagcatagccgag
aacgatgtcatctacgccttccaggctccgccgctctacatcagagggggctctgcacgc
atctcagggtaccaccacagcttgccctcatccccatactccacaggtcccgagggtcaa
aggttaccttcgtctggggcgctatcgtcagagtttctcaaccacggtgtccctgtgaag
atcctgctgctggtgtgtaacgctgctggggctggccaacagactgccaggttcggacct
ccgttcttaatgagggaggatcggtctatttcctgggaccagctccagcaaagcatcctc
agcaagctttattacctgatgatcaatggagctccagctcagaacaccagagtgcttttc
aacatccgtgtggtgggaggatcaccgttttacagctacttgtcacctcaggatgggcgg
ccgctctttcatccagctgtcgacagagctctgaagctctgcggctcagggggacctcct
cacgtgaagctcatcatcgagtgggagcacagagtcaaagactgcctgtttggaaacatt
cacgaggaggtggtgaaggatgcggacaacgtgaggaatctgcagcagcagcacgtccag
cagttcagctgcaccttggacgagtgcttccagctctacaccaaagaggagcagcttgcc
ccagacgatgcctggaagtgcccccactgtaagcagctgcagcagggcatggtgaagatg
agcctgtggaccctgccggacatcctcatcctccacctgaagcgcttcaggcaggtgggc
gagaggaggaacaagctcaccacctttgtgcatttccccctggcgggcctggacatgacg
cctcacatggtgagccgcaacagcggcctgcagcaggtccctcttcagccgggctggagg
cactccaggagagcggagctggcccctccggacttcctgtatgacctgtacgccgtctgc
aaccaccacggaggaatgcacgggggacactacacagccttttgtcggaactccgtggac
ggtcagtggtacagttatgacgacagcagcaccgagccggttcccgaggcggaggtgtgc
acacgtggagcctacattcttttctaccagaaaagaagcaccatccctccctggtctgca
agctcctcagtcactggttccaccagctcgtcgttcaccgaccactggctggtccgactc
acagggggaagtgagaggggcagcgtggtttcaggtggtactaaacctgcagctttgaag
gccatgcaggcttcagagtctcctgagctaccggtcttcagagatgaatccatcaaaagg
gcagaaacaaacgggtctggagtcaaccagctggtacgagggacccaggtcaggagttta
agcatgaggtcaccaactaaacccaaggataccctgagcaaagttcttccattgcggtgg
tcctttgggtccaaagatcgcatcaggcactcagtcccaactcagtctggagagctggta
gagtacttggagtccggacgccgaccacgatgcaccaaagaccctatcgtcgccctggtg
gccactccgcctctgaggaacagccggggaagagtcctcgaggtgggacaagactgcagc
tcaccgagcggcagtagtctcagctgtacagacagactcagctccgacacctcctattcc
cccaaaatcccagagggacagagcaggccctgcttggagagaaacctcagccatggatct
ggtaccggcagtcacatcaaattcagggatgacgattctctgaggcagggatcaactaag
agaccgagaacagatcaggtccgagccctggacctccagctgcagagaggggccattcta
ggtggtcacataagtcacagtgctccaccaagcagagactctacgctgaaaagaaccgtg
gtccaaacaggtggaacctcaaggggccaaaaggacttagtgcaggtgggtgttcaaact
ttggacaagaaggagcacagaggggaagaggctcggagccaagacggcctcttgccagtt
ctcaagtctgctttagtgaaaaaagacattcctagatcaccatttaaagaacaagaccga
cgaatgaacagccacggacacctgggaaaactggcaaacagcaatttagccaaattttct
ttctccaacgggacgcttcctgcagtgcaacaagacgataagagagggttcatcatcccc
agctgtgacccccagaactgcaaaactcatctggtcaatggaaaagctggcattcaggag
cccgtcgacatcaagagggctcacagctccagcaacatcgagacaaagctagatttgaca
tttcgcaggtgtgcctctctgcagcggaacggggaagttgtggttcctccatcgcaccgg
gtactgctgtcagacaagaccggctgctccactctccagcggacgagatacagcaccacc
tccctggtgcccatgtga
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