Kryptolebias marmoratus (mangrove rivulus): 108236248
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Entry
108236248 CDS
T05608
Symbol
farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108236248 (farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kmr01007
]
108236248 (farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108236248 (farsa)
Enzymes [BR:
kmr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
108236248 (farsa)
Amino acid related enzymes [BR:
kmr01007
]
Aminoacyl-tRNA synthetase
Class II (U)
108236248 (farsa)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108236248 (farsa)
Prokaryotic type
108236248 (farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
ARM_FBXO47
MarR_2
Motif
Other DBs
NCBI-GeneID:
108236248
NCBI-ProteinID:
XP_017272279
UniProt:
A0A3Q3FNL7
LinkDB
All DBs
Position
LG12:18461729..18477206
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AA seq
497 aa
AA seq
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MADTGVAETLLKRIEKVDGGVDSVEVATSLGVEHQAVVGAVKSLLTLGDVISAELRSSKH
WELTEEGKEIAEQGSHEARVFSAIPPDGLPQAELMKLSFGKIGFSKAMSNKWIRVDKSHA
GGPRIFRTVDSIQDQVRDKLLVVQKGDGTQLEEKEKNELKKRKLLSEVTLKSYWITKGSS
FSTSVSKQETDLTPEMIATGSWKEKKFKPYNFEAMGIAPDCGHLHPLMKVRTQFRQIFLE
MGFSEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPALAHEFPLDYLERVKRVH
SEGGYGSQGYKYDWKIEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGILHQFFTKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKRWVEVGNSGVFRPEMLLPMGLPQDVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPICLLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccggtgtggcggagacgctcctaaagcggattgagaaggtggacggcggc
gtggacagcgtggaagtggcgaccagcctcggggtggaacaccaggccgtcgtgggagcc
gtgaagagtctgctgacgctcggcgacgtgatctcagcagagctacgctcctccaaacac
tgggagctgacggaagagggcaaggagatagccgagcagggcagccatgaagcccgggtc
ttcagcgccatccctccggatggtctacctcaggctgaactcatgaaactttccttcggg
aagatcggattcagcaaggccatgtccaacaagtggatccgagtggacaagtcccacgcg
ggaggccccaggatattcagaaccgtggacagcatacaagaccaggtgagggacaagctg
ctcgtggtgcagaagggcgacggtactcagctggaggagaaggagaagaatgagctgaag
aagaggaaactcctctcagaagtgacccttaagtcttactggatcactaagggcagctct
ttcagcaccagtgtatccaagcaggagacggacctcacccctgagatgattgccacaggc
agctggaaagagaagaagtttaaaccctacaattttgaggccatgggcatcgccccggac
tgcggtcacctgcaccccctgatgaaggtgcgaacacagttcaggcagatcttcctggag
atgggtttcagcgagatgccgaccaacaacttcatcgaaagctctttctggaacttcgac
tcgctgttccagccgcagcagcacccagcgagggaccaacacgacaccttcttcctgtct
gaccctgcgctcgcccacgaattccctctggactacctggaaagagtgaagagggtccac
tcagaaggaggctacggttcacaggggtacaaatatgactggaagatagaggaggctcag
aagaacatcctccgaactcacacgacggcagtcagtgcacggatgctctataagctggct
caacaggagaagtttacccctgtcaagtacttctccatcgaccgggtgtttaggaacgag
accctggacgccacccatcttgcagagttccaccagatagagggcgtggtggccgactac
ggtctgactctgggagacctcatgggcatcctgcatcagttcttcaccaagctaggaatt
accaaactacgcttcaagccagcttacaacccttacacagagcccagcatggaagtgttc
agctatcatgaaggactgaagcggtgggtggaagtggggaactcgggcgtctttagaccg
gagatgttgctgcccatgggcctccctcaggacgtgtctgtaatagcgtggggcctttct
ctggagaggcccaccatgattaaatacggcatcaacaacatcagggagctggtgggacac
aaggtgaacctccagatggtctacgacagccctatatgcctactggactcctga
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