Kryptolebias marmoratus (mangrove rivulus): 108236251
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Entry
108236251 CDS
T05608
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03440
Homologous recombination
kmr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108236251 (top3a)
03460 Fanconi anemia pathway
108236251 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108236251 (top3a)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108236251 (top3a)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108236251 (top3a)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Topoisomerases
108236251 (top3a)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108236251 (top3a)
FA (Fanconi anemia) pathway
108236251 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
108236251
NCBI-ProteinID:
XP_017272283
UniProt:
A0A3Q3AW19
LinkDB
All DBs
Position
LG12:16324462..16345150
Genome browser
AA seq
1023 aa
AA seq
DB search
MLIPQLLERSSLRSGLTRLQQRYFWGSRSGRCPDTPRGSDMNRSRAQIKRVLCVAEKNDA
AKGISEILSSGRARRREGMSKFNKIYEYEYHLFGQTVTVITTSVSGHLLALEFKAPFKKW
HSCNPVLLFDTEVEKYCPDNMIQIKRTLEKEVRQCQALIIWTDCDREGENIGFEIIDVCR
AVKPNLQVFRAKFSEITPNSIQRACETLTDPDSNISDAVDVRQELDLRIGASFTRFQTLR
LQKIFPESLANQLISYGSCQFPTLGFVVERFKAIQAFIPETFYKIKVLHEVEEETVEFNW
KRNRLFNHTACLVLYQICMEDPIATVTSVTSKPKSKWRPLPLDTVELEKLASRKLKINAK
ETMKIAEKLYTQGFISYPRTETNIFPANLALAPLVEQQTLSPQWGMFAQRVLDQPGGPNP
RQGRNSDQAHPPIHPTKHTSTLQGNEARVYEFIVRHFLACVSQDALGQETVVDIDIAQEK
FSTSGLMIIARNYLDVYPYDRWSTKVIPVFEQDSQFQPSAVEMVDGQTSPPQLLTEADLI
SLMEKHGIGTDATHADHIETIKSRMYVGLTADQRFIPGELGMGLVEGYNSMGYEMSKPNL
RAELEADLKLVSEGKKDKTSVLRQHIHKYKNVFIESVRKAKKLDEALVPYLGAAQEITEV
EQQDVEIPLPVRKCPNCGLDMVLKKKREGNSKFLTCVGYPACKTAVWFPDSVLEVSRDDS
VCPTCQPSPVHMLKLKFRRGSLPPMMPLEFVGCIGGCDETLREVLDLKYLRLGGGGGGGG
GGGDDPPALRTPRAEPLRAPSSLPPVPSWSPQPRPPPAGGGVSVNTSGDAIVCNCGQAAL
LLTVRKDGPNQGRQFYKCNSGSCNFFLWADQPSQQKAPQSRGSSLSAQRTPQPPRPSPGF
GNTSGGGRGQGASVSGHVGHTMCNCNEAAATRTVQKDGPNKGRMFHTCGRSRDQQCGFFQ
WIDENMPPPDGFGGFNQVGDGGRRGRKAAAADRSANRPPAAKKPRTCSICHVPGHTRVTC
PQR
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcccgcagctcctcgaaagatcctcgcttcggtcgggtctgacgcggcttcag
cagaggtacttctgggggtcccggagcggccggtgcccggacacaccgcgggggtcagac
atgaaccggagccgggctcaaatcaagcgggtcctctgtgtggctgagaagaacgatgca
gccaaagggatctctgagattttgtccagcggcagagccaggaggagggaagggatgtca
aagtttaataaaatatatgagtatgaataccacctctttggccagactgtgacggtaata
acgacatcagtgtcaggtcatttacttgctttggagtttaaggcaccattcaagaaatgg
cacagttgcaatcctgtgttgctgtttgacacagaggttgagaagtattgtccagacaac
atgatacaaatcaagcgaactctggagaaggaagtgaggcaatgccaggccctgatcatc
tggactgattgtgacagggagggcgaaaacattggctttgaaattatcgatgtttgcaga
gcagtgaagcccaacttgcaggtctttcgagcaaagttttccgagatcacccccaactcg
attcaacgagcctgcgagacgctaacagaccccgattctaacatcagcgatgccgtcgat
gtccgccaggagctggatttacgaatcggagcgtccttcactcgattccagacgcttcgc
ctgcagaagatcttcccagaatccctcgccaatcagctgatctcgtacggcagctgtcag
tttcccactcttggcttcgtggtggagcgcttcaaagccattcaggccttcattcccgag
acgttctacaagatcaaagtgctccatgaagtcgaggaggagactgtggagttcaactgg
aagagaaaccgtctctttaaccacacagcgtgcctggtgctctaccagatctgcatggag
gatcccatagcaaccgtcacctcagtaaccagcaaacccaagagcaaatggagaccgctg
cctttggacaccgtggaactggagaagctggcgtctcggaagctcaaaataaacgccaaa
gagaccatgaagattgctgaaaaactttatacacaaggatttatcagctatccccgcaca
gaaaccaacatttttcccgccaacctcgccctcgcccccctggtggagcagcaaacgctg
agcccgcagtggggcatgttcgcccagcgggtgctggaccagccggggggccccaaccca
cgacagggcagaaactcagaccaagcccaccctcccatacaccccaccaagcacaccagc
accctgcagggtaatgaagcacgagtgtacgagttcattgtccggcacttcctggcctgc
gtatcccaggatgctttggggcaggagacagtggtggacatcgacatcgctcaggagaag
ttctccacctctggcctcatgattatcgcgaggaattacctggacgtttacccctacgac
aggtggagcacgaaggtgatcccggtgtttgagcaggactcccagtttcagccctctgcc
gtcgagatggtggacggacagacgagtccaccgcagctgctcaccgaagccgacctcata
tccctgatggaaaagcacggcattggcacggatgccacgcacgcagatcacattgagacc
atcaagagccgcatgtatgtgggtttgactgcagaccagaggttcatccctggggagctc
gggatgggactcgtggagggttacaactccatgggctacgagatgtcgaagcccaacctg
cgtgctgagctggaggccgacctcaaactggtgtcagagggcaagaaggacaaaacgagc
gtgctgcggcagcacatccacaaatacaagaacgtcttcatcgagtccgtcaggaaggca
aaaaagctggatgaagccctggttccgtacctgggtgcagctcaggagatcaccgaagta
gaacagcaggacgtggagatcccgctgccggtgaggaagtgtccgaactgtggtctggac
atggtgctgaagaagaagagggaggggaacagtaagttcctgacgtgtgtgggatacccc
gcctgtaagacggccgtctggtttcctgactcggtgcttgaggtcagcagggacgacagc
gtttgccccacatgtcagccgagccctgttcacatgttgaagttgaagtttcgcagaggc
agccttcctcccatgatgcctctggaattcgtcggctgcatcggtggctgtgatgagacg
ctcagagaggtgctggacctcaaatacctcagactaggaggaggaggaggaggaggagga
ggaggaggagatgatcctccagctctgaggactcctagagcagagccgctcagagcccca
agttcccttcctcctgtcccctcctggtccccgcagccgaggcctccacctgctggcggg
ggcgtgagcgtcaacaccagcggcgacgccattgtgtgcaactgtggtcaggccgcgctc
ctcctcaccgtgcgcaaggacgggcccaatcaaggtcgccagttctacaagtgcaactcc
gggagctgcaacttcttcctgtgggcggatcagccgagtcagcagaaggcgccgcagagc
cgagggtcctcgctgtcagcgcagaggacccctcagcctccgaggccgtccccgggcttc
ggaaacacgtccgggggcggcagggggcagggagcgagcgtgtcgggacacgtggggcac
acgatgtgcaactgcaacgaggctgcggcgacacgcacggtgcagaaggacgggccgaac
aagggccgcatgttccacacctgtgggagatcacgagatcagcagtgtggcttcttccag
tggatcgacgagaacatgcctccaccagatggttttggtggctttaatcaagttggagac
ggcgggaggagggggaggaaggcggcggcggcagaccgttcggctaacagaccccccgct
gctaagaaacctcgaacctgcagcatctgccacgtcccggggcacacccgcgtcacctgt
cctcagcggtga
DBGET
integrated database retrieval system
