| Entry |
|
|---|
| Symbol |
ccdc88aa
|
|---|
| Name |
(RefSeq) girdin isoform X1
|
|---|
| KO |
|
|---|
| Organism |
kmr Kryptolebias marmoratus (mangrove rivulus)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:kmr00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:kmr03037]
108236274 (ccdc88aa)
Cilium and associated proteins [BR:kmr03037]
Primary cilia and associated proteins
Other primary cilia associated proteins
108236274 (ccdc88aa)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
LG3:complement(24117600..24140054)
|
|---|
| AA seq |
1805 aa
MESGVFLPSLDHFMLSPLVTWVKTFIPDDGGVHLDFSDLLDGVMLNEIMAQINLSAAPQG
AKTVSRDPSQRIQNLNFLVQQIKTYYLDHLRQLIMIPLPDVLLLSSTPYCEQSLDEMKKL
LLLLLGCAVQCEKKEEYIERIQTLNFETKAAIAAHIQELTHSQENVLDLQWLESDEMHPE
DMETVLRNMATLLQQLMDQRDAHLETIADLMQEKEGVVTLLGSPSTPQSDSFSPSMQQQQ
TGTQQHLAVELADSKAKIRRLRQELEEKSEQMLDCRHELENMETELKRIQQENSQLLVDA
RAARTYRDELDALRERAIRADKLESEIGRYREQLHKMEFYRIKVEELKEDNRVLQETKEV
LEDQLEGWRARTDKIHQLEKHSLLLKARVHDMEQEKESDMRRIKELQEENLALCLAQRRS
MEESQHLGWELEQLSKSTEAPHGQQTLSEEVSEKTQSQILKLEKDNQSLLRIMEELSSTK
PKSGHCVVCSANNSTSSTEDSSMIQTSCSVLQNLTDVSCHNGDSDCYQEPITENLEQVQS
EIFLTDNPELYTQAGGHSEDHGSSEHFNKILSDLDVLQNTNNKLHCIVGSDDHSHGSKSS
SPSRDIFTGLPASSSYVIKHSKRLEVKCRDLCTSNQQLQTSLYNTERKVQRLEAEVQELE
AENQILQASLEELRISARRLEQLEMEKQNMEHETTALERDKRQLEKENRRLRQQAEIQEA
NLDNRNVSMASLEREFRFLLQEVEGLRETSGRVKYLENDNRELTKQAAIDQKTLETLREE
LVSEKLKTQQRDNEVERLSHDQEMEVLNQESTPQEGPDNSRFRMLESELESSLKNSLQIK
DEKIATLEARLQESSSLNQQLRQELKTAKLNCEALQQRRQEEEEWATSSFHPPAETNRSV
TEWLRENQEATKELLRLKDRLIEVERNNATLEAERQAMQGQLKQLESQSDSQQAQILALQ
RQAASLQENNTSLQTHNANLQVEKSTLNSQSASLMAQNAQLQQQQSRTESERDSAARTRE
ELRSAHEQLLRDHERLTVLHERQAMEYEALMGKQACLKNAHRTLELEHRTLQDRYNSLLQ
QRTKLEDLEKTLKEEQMRMTLEKEQQRTTTAECVRLRDEKDWLNQTYRQLLNDNEALTED
HKQLKSQLNEMKLEHTWLEADFSKLKKEFQELDITSTKLSNQCELLGQLKGNLEEENRHL
LGQIETLMLQNRTLLEQNMESKDMFHVEERQYIDKLNDLRRQKEKLEEKIMDQYRFYEPS
PPRRRGSWIALKLKKLIKSSSREHGPETVAEPQFSSQDNSSFVSSDGSGCSASNSAGEAI
SQQRNSTLLKRFPRLRTRLKNRDHVKFLFRRSMSLSSLSCPSASFEAKQDESEADVEEDP
LTSSFTTSILSIRHHPTTLPSGCFNSSITDTVPDISVLWVTDKNSNGSTVPSGCEDSDEL
QNHGLNGIHSRAQSESSNEFSLSLENEPWSNGSSPVQQPPSCNSSSLYQPPNDASTPQRH
IKLQQHKEKTSTGPVPNSQISDTQPVQKEKDPVASQDFWLTRGTKTIRKGSKSKVARRSS
DSGGSGKINYELNGITLRNESTRASAYSPITVLYVQGKSSSMSGCLNCFSTPLVKEGRLN
EFRSPKSLPRSSSVISTAEGSSRRSSVSSDCRVTFKAEPVQVSEENGAQEETPNQSQELD
SASKNSEPDLIPPAKPPRDPAVVLTKHQKSPVQESLLGSSFTFNSVFSNTIFSDSEVTTT
ASLDVLDIGQTFLSPNPSLVHSSPLESQGFAEKTSQTVLSSGNERSQNAERADGFEGRSQ
LLTIT |
|---|
| NT seq |
5418 nt +upstreamnt +downstreamnt
atggaaagtggagtttttctgccctccctggatcacttcatgctgagccctcttgtcaca
tgggtgaagacatttattccagatgatggaggcgttcatttggacttttcagacctgctg
gatggggtgatgctgaatgagataatggctcaaataaatctctcagctgcacctcaaggt
gcaaaaactgtcagcagagatccgagtcagaggatccagaacctgaactttcttgtccag
caaatcaagacttattatctggatcatctgagacagttaatcatgattcctttgccagac
gtgttgctgctcagcagcactccttactgtgaacaaagtctggacgaaatgaagaagctt
ttgctgttgctgttggggtgtgcagtccagtgtgagaagaaagaagagtacattgagagg
atccagacgctcaactttgagacgaaagctgcaatagctgctcacattcaggagctcacc
cacagtcaggagaacgtgttggatctgcagtggttggagtctgacgaaatgcacccagaa
gacatggagacagttttgaggaacatggccacactcctgcaacagctcatggaccagaga
gacgcacatctggagactattgcagatctaatgcaggaaaaagaaggagttgttaccttg
ctcggtagcccctccaccccacagtctgacagcttttctcccagcatgcaacagcagcag
acagggactcagcaacacctggcggtggagctggctgactccaaggcgaagatcagacgt
ctcagacaagaactagaggagaagagtgaacagatgctcgactgcagacatgagctggag
aacatggagacagaactgaagaggattcagcaggagaactcccagctgctcgtggacgca
cgcgccgcccgcacctatcgcgacgagctcgacgccctgcgagagcgagccatcagggcc
gacaagctggagagtgaaatcggacgctacagggagcagctgcacaagatggagttctac
agaatcaaagtggaggagctaaaggaggacaacagggtgctgcaagagaccaaagaggtg
ttggaggatcagctggaaggctggagagctcgaacagataaaatccaccagctggagaag
cacagtctgctgctgaaggcccgggttcatgacatggagcaggagaaagagtctgacatg
aggcgcatcaaggagctgcaggaggagaacctggctctgtgtttggcacagaggaggagc
atggaggaatcccaacacctgggctgggagctggagcagctctccaagagcacagaagca
ccccacgggcagcaaactctgagcgaagaggtcagtgagaaaacgcaaagtcaaatactg
aagctggaaaaagataaccaaagtctgctgaggatcatggaggagctcagcagcacaaaa
cccaaatccggccattgtgtggtgtgcagcgccaataactctacgtcatcaacagaggac
tcctccatgattcaaacctcctgctcagttctacaaaacctcactgatgtgtcctgccac
aatggagactcggactgttatcaggaacccattacagaaaatctggagcaggtccagagt
gagatctttctcacagataacccagaactttatacacaggcgggaggacactcagaggat
catggcagttcagaacatttcaacaagattttgtcagatctggatgttttacagaatact
aacaataagctccattgcattgttggatcagatgatcactcccacggttcaaagagcagc
agtccttctcgtgacatcttcacaggtctgccagcatcttcctcttatgtcatcaagcac
tcaaagcgcctggaggttaaatgcagagatctgtgcacatctaatcagcagctacagact
tctctttacaacaccgagcgaaaagttcagcgtctggaggcagaggttcaggagctggaa
gctgaaaaccagatcctgcaggcgtccttggaagaacttcggatttctgcgagacgcttg
gagcagctggaaatggagaagcagaacatggagcatgaaactactgctctagaaagagac
aagaggcagctggagaaagagaatcgacggctccggcagcaggctgaaattcaggaagcc
aacttagacaaccgtaatgtttccatggctagtttggaaagagagtttcgtttcctactg
caggaggtagaaggtttaagggagacatcagggagggtcaaatacctcgagaacgacaac
agagaactgaccaaacaagcagctatcgaccagaagaccctggaaaccctcagggaggag
ctggtgagtgagaagctaaaaacccagcagagagacaatgaagtggagaggctgagccat
gatcaggagatggaagtccttaaccaggagagtacaccgcaagaaggaccagacaacagc
aggtttaggatgctagaatcagagctggagtcatcacttaaaaactccttgcaaatcaaa
gatgagaagatagcaactctggaggctcgtctgcaggaatcctcctccctgaaccagcag
ctgcgtcaggagctgaagactgcgaagctgaactgtgaggctttacaacagaggcggcag
gaggaggaggagtgggcaacatcgagcttccatcctccagcagagaccaacaggtccgtg
accgagtggctgcgggaaaatcaggaggccaccaaggaactgctgcggctcaaagaccgc
ctcatcgaagtggaaagaaacaatgcgaccctggaggcagaacgccaggctatgcagggt
caattaaaacagctggaaagtcagtctgacagccagcaggctcaaatcctcgccctgcag
aggcaggctgcttcactgcaggagaacaacacaagcctgcagacacacaacgctaacctg
caggtggagaagtcaacactgaactctcagagcgcctccctcatggcccagaatgctcag
ctgcagcagcagcagtccaggactgaaagtgagcgagacagtgcggcacggacacgtgaa
gagctgcgcagtgctcacgagcagctgttacgagatcacgagcggctcacggttctgcac
gagcggcaagccatggaatatgaggccctgatgggcaaacaagcctgtctgaaaaacgcc
caccgcacactggaactggagcaccgcacgttacaagacaggtacaacagtctgctgcag
cagcggaccaagctcgaggacctggagaaaactctgaaggaggagcagatgaggatgact
ctggagaaagaacagcaacggacaacaacggctgaatgtgtccggctgcgggatgagaaa
gactggctcaaccagacgtaccgacagcttcttaatgacaacgaggcgctgacagaggat
cacaagcagctcaagagccagctgaatgagatgaagctggagcacacctggctggaggca
gacttttccaaacttaaaaaggagtttcaggagctggacataacctccacaaaactcagc
aaccagtgtgagttgctgggtcagttgaaaggaaacctggaggaagaaaatcgccacctg
ctcggccagattgagacgctgatgttacaaaatcgcaccttgttggagcaaaacatggaa
agcaaggatatgtttcatgttgaagagcggcagtatattgacaaacttaatgatttgagg
aggcagaaggagaagttggaggaaaagataatggaccagtacaggttttatgaaccttca
cctcctcgcagacgtggaagctggatagctctgaaattaaagaaactaatcaaatccagc
agccgtgagcatggacctgaaaccgttgctgagccccagttctcctctcaggacaacagc
tccttcgtcagctcagatggctccggatgctcagcctccaactcggcaggtgaagccatc
tcacagcagcgtaacagcaccctcctgaaaaggtttccccgtttgagaaccagactaaag
aacagagaccacgtcaagttcctcttccgccgttccatgtctctgagcagcttatcctgc
ccctcggcctcatttgaggcaaagcaggatgagtcagaggctgacgtggaggaagaccca
ctgacttcatcctttactacctccattttgtccattcgtcaccatcccaccactctgcca
tccggatgtttcaacagctccataactgacactgttccagatatttctgtgctgtgggtg
acagacaaaaattcgaatggcagcactgtgccatctggatgtgaggacagcgacgagctg
cagaatcacgggctgaatggaattcatagtcgtgcccaaagtgagagcagcaatgagttc
agcttgagtttggaaaatgagccgtggtcaaacggcagcagtcctgtccaacagccccca
tcgtgcaactcctcctccctctaccagccacccaatgatgcctccaccccccaacgtcat
ataaagctgcagcagcacaaagagaaaacctctactgggccagttcccaacagccagatc
tcagatacccagcctgtacaaaaagagaaagatcctgtggcgtctcaagacttctggctc
acaagaggtactaaaaccatccgaaaggggtcaaagagcaaggtggcgcgtcggtcatca
gactcaggaggctcaggcaaaattaactatgagctcaatgggataaccctaagaaatgaa
agcactcgagcctctgcttattcaccaatcacagtgctgtatgttcagggtaaatcatcc
tccatgtctggctgcctcaactgcttctccacccctctggtgaaagaaggacgactgaat
gagttcagatcccctaaaagtctcccccgttccagcagtgtcatttccacagcagagggc
tcatctcgacgctccagtgtcagcagtgactgccgggtgacgtttaaggctgagcctgtt
caggtttcagaggagaacggtgcacaggaggaaacaccgaatcagagtcaagaattagac
tcagcctcgaagaacagtgagcctgacctcattcctcccgctaaacctccaagagatcct
gcagttgttctcacaaagcaccagaaatctcctgtgcaggagtcacttcttggctcttcg
ttcacgtttaactctgttttctcaaacacaatcttcagcgattctgaggtcactacaaca
gctagcctagacgtcctggacattggtcagacgtttctctctccgaatccatcgctggtg
cacagctctccccttgagagccaaggatttgctgagaagacatcacaaacagtgcttagc
tctggaaatgagcgaagtcaaaatgcagagcgtgcagatgggtttgaaggaaggagccag
ctgctgacaatcacatag |
|---|
