Kryptolebias marmoratus (mangrove rivulus): 108236275
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Entry
108236275 CDS
T05608
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108236275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108236275
03021 Transcription machinery [BR:
kmr03021
]
108236275
03036 Chromosome and associated proteins [BR:
kmr03036
]
108236275
Transcription factors [BR:
kmr03000
]
Eukaryotic type
Helix-turn-helix
ARID
108236275
Transcription machinery [BR:
kmr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108236275
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108236275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
108236275
NCBI-ProteinID:
XP_017272320
UniProt:
A0A3Q3ASR9
LinkDB
All DBs
Position
LG10:complement(15577409..15733566)
Genome browser
AA seq
2223 aa
AA seq
DB search
MAAQVASVPTRTNNNKNKKLSGGLGPELNSGKSERGGTAQRSGPMLGAGDGTLNNVDHHR
RNELSMVHSTSTAHMGPDGHDKVGNNLTSASNPNTSPMETGLIPNHKLKCVGSVEPPQSQ
PAQQPPQFGQFAPHQQRQIESNSASNNGQPPRGERSMDHQHHGGKENLLGGQEDAPGKGE
GELTCKPAERMMSSRFEHSNLGPPNNSEFNNNYYPPRPCYDQHGGQQQQSSGMGVTHSSA
HNSMENSHEAGYHNSQYGQYPAYRAGYGGGAYGMMGPSGCRQPGNMMMGSNSSAPHGKSP
LGAASGGFQRYPGQTSQQQHPSGATPTLNQLLTSPSPMMRGYGGGYQDYAGPTPQQQASM
SLGKDVGPQYGATSAHWGGQQRNHPLSMNPGNGGQGLSRAQVSSMDFMAMKRSQMYGMAN
NPYSNPQQPGVGPYPSSQPYASPPPHRYPMGMQGRSQMGMGGMQYPQQQVAPYGQQPMGG
FGQQQQGGQQGTPSYFSTPQQTPTGPSQSSYLQPRPPPQQEAQQESYNIRGPAPGNSGKT
GEDGVPHDRPSSLPDLSGSIDDLPTGTEAGLGPAVSAAGSSNSSNSSGSQGEQGGTGNQG
QSPFSPHASPHLPSQRSGPSPSPVGSPAGSTQSQQSRSGSGPISPANSTVPGSTMTPQNS
GNGPDGAHLPITRSPMAQERGFVSGMQRNQSGSQFASPQSGPPMSPHPSPGGSMYPGMGS
YSQSGPAGLYGPQGPQYGHQGNYPRPSNYSGAVSTSYSSPGPGMTNSLEMNATSPMHGQG
PGQPVPGGRNLGPGSQNRTYPSMGPSSPSMPQSAGPGMGPPSLGNRKSQEGAAAGMPGSA
NSVHNRQGNYQGPSINQGSAISYTQPTSNNSSATGNGQGPGYSIPPSGDGIMSPDGKLKL
DVKDDGGPNSETHKPKLQDGYMNNNSSSASQPATPGGTLPMPSPLSPSPASLSSYHGDDS
DSISSPPWPLKTPSSPKVNPNSSSSIGGERISRLYELGAEPERRAWVERYLTFMEERGTP
VTQLPVVGKKPLDLWKLYMAVREIGGLAMVNKNKKWRELSSTLNVGTSSSSASTLKKQYI
QFLFAYECKMERGEEPPADSNSGSSVTEGDSRKQVKIQPPSPANSGGSLQGPQTPQSSGS
SSTAEVVGDLKPPTPATTPLGQVTPLLPNRSSVSVQDPFSEVSDPAFQKRATSLPPSAPY
QQGLSMPDMMMRMQYDAKDPFAGMRKMAGADPYIPSQMPSGGMPDMYGRPPSGLSMSQRS
QYPYGSGYDRRSDHMMGMEGTMGPPGSQNNMGHSNSEGSMYSPSRYPSQQRHDGYGQQYS
SMPYGMHPSGMYPQQQGYKRQMDGMYGPPPKRHESDMYAMQYTNQQPDMYNHYGGGYSGP
EHRPIQGQFPYPYHRDRMAPSGQSQHSMMGGGPTPNPAADGPNMWPSRTDLGYPYHSRQG
PPSQMPPYGSICRDDMDGRPGQDQWHRQSPYMSSSGGMTPLSSRQPSSYSNSPSMANHLP
RAPSPGPFHRSMDPRMSPSKAPFMSPMKMPKPGLAMMGAQSSGPIGQFPPNLRRDLNYPP
GSVEATLPLLKPRRKLNSKDCGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVAS
FNLSQLPGFLELIVEYFRRCLIEIFGILEEFEVGTMAHKNHLDSDSVQTEEPAPNQETDS
TALTGPESSSAAETQEEQTAGTEEKAPPAPAEPAEVCGKKEDSDVGPKKKEKNNKKEAEE
EREKEIKKESSDHPPADLEPKPKQASKYDKLPIKIVHKGDLIEDLIERLGYITEFTSGLQ
HWQAGGGDSTAHIQTHFEPQSEPPVREDKKAKNEDKQEDKMENRKLLKHITATIDDVLCA
RVDALSHAHPARSLPSYPFRVHPDGEDDHITLLEDEPRCLDEAPLCTTSAWQDSLSKRCL
CVSNIVRSLSFIPGNDMEMSRHPALVLLLGRLLLLQHVHPERNRMALSYQRDEQQERELS
SSKDEWWWECLSLLRENAMVTLANIAGHLDLSSYSDTICLPILDGLLHWMVCPSAEAQDP
FPSAAPHSQLSPQRLVLECLCKLSIQDGNVDLILATPPFSRQEKLFAILVRCVGQRKAQV
YREMAVAVLSHLAQGDPTAARAIALQKGCVGNLVAFLEDGVSMAQYQQNPHSLLHIGHPP
MDPPSINMMCRAAKGLLAMAKVEENKTEFVLYESRLLDISISSVLNTGVVAIVCQVLFHL
GKL
NT seq
6672 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcggttccgaccagaactaataataacaaaaacaagaaatta
tccggcggtttgggtccggagctcaattcggggaaatccgaaagaggagggaccgcgcag
cggagtggaccgatgctgggcgccggcgatggaactctgaataatgtagaccatcaccgc
cgaaacgagctcagcatggtccattcaacttccaccgctcacatgggtccggatggccac
gacaaggtcgggaataacctcacgtccgcgtcgaatccgaacacttcgccgatggagacg
ggtctgatcccgaaccataagctgaagtgtgtggggagcgtagagcccccccagtctcag
ccggcgcagcagccgccgcagttcggccagtttgcgccacatcagcagcgacagattgaa
agtaacagcgccagcaacaacggccagcctccccgcggggaacgaagtatggatcaccaa
caccacggtgggaaagagaacctgttggggggacaggaggacgcgccggggaaaggtgag
ggggagctcacctgtaaacccgcggagaggatgatgagctccaggtttgaacactcgaac
ctggggccgccgaacaactccgagtttaataacaattattaccctccaaggccgtgttat
gatcaacatggcgggcagcagcaacaaagcagcgggatgggggtaacccactcctcggca
cacaacagcatggagaactcccatgaagcagggtaccacaacagccagtatggccagtac
ccagcataccgtgcgggctacggcggcggggcctacgggatgatgggcccctctggatgc
aggcagccaggtaatatgatgatgggcagcaactcttcagctccccacggcaagtctccc
ctgggagctgcctcgggtggctttcagaggtacccgggacagacttcgcagcagcagcat
ccctcaggggccactccgaccctcaaccagctgctgacatctcccagccccatgatgcga
ggttacggagggggctatcaagactacgctggccccacacctcagcagcaagccagcatg
agcctggggaaagacgtggggccccagtacggagccacctcggcacactggggagggcag
cagcggaaccacccgctttcaatgaacccaggaaacggagggcaaggcctcagcagggcg
caggtttcctccatggacttcatggctatgaagcgctcacagatgtatggcatggccaac
aatccctactcaaaccctcaacaaccaggggttggaccttacccctctagccaaccgtac
gcatcaccacctccacatcggtatccaatgggcatgcaggggaggagccaaatgggcatg
ggagggatgcagtatcctcagcagcaggtggcgccgtatggtcagcagccaatggggggc
tttggccagcagcagcagggggggcaacaaggaaccccttcgtacttcagcacccctcag
cagactcccacaggcccgtcgcagagttcctacctgcagcctcgaccgccgccgcaacag
gaggcccagcaggaaagctacaatatcagaggtccagctccagggaattctgggaagact
ggtgaggatggggtcccccacgaccgcccctccagtctgccggatctgtctggctcgatt
gatgacctccccactgggactgaggctggtctgggcccagccgttagcgctgccggatcc
tccaacagcagcaacagcagcggtagccaaggggagcagggaggcactggtaaccaggga
cagtcccccttttcccctcacgcctcccctcacctccccagccagaggagcgggccctct
ccctcccccgtgggctccccggcgggctccactcagtcccagcagtcccggtcgggttca
gggcccatctctcctgctaacagcactgtgccaggttcaacgatgaccccacagaactct
ggaaatggaccagatggggcccatctgccaatcacacgttcacctatggctcaggagaga
ggtttcgtgtccggcatgcagagaaaccagtcaggctcccagtttgcatccccacagtct
ggacctcctatgtccccccacccatcccccgggggttcgatgtaccccggtatgggttcg
tactcccagagtggccctgctggtctctatggacctcaaggacctcaatatggacaccaa
ggtaactaccctcggccctctaactacagcggggcagtcagtaccagctacagcagccct
ggacccggcatgactaacagtctagagatgaacgctaccagtcccatgcatggtcagggc
cctgggcagccagtacctggaggacgcaaccttggcccaggcagccagaatcggacgtac
ccatctatgggtcccagttctcccagcatgccacagtcagcagggccaggaatgggtcct
ccctctttgggtaaccgcaagtcccaggaaggagcagcagctggcatgcctggttctgct
aactcagttcacaacaggcagggaaactaccaaggcccaagcatcaaccaagggagcgcc
atctcctacactcagccaacgagcaacaatagttcagctacaggaaacggacaaggtccg
ggctacagtattcctccttcaggagatggcataatgagcccagatggtaaactaaagttg
gacgtcaaagatgatggcggccccaacagcgaaacacacaaaccaaagcttcaggatggt
tacatgaacaataacagcagcagcgcgtcccagccagccactccaggtgggaccctaccc
atgccctcccccctctcccccagccccgccagcctgtcttcataccacggagatgacagc
gacagcatcagcagcccaccctggcctctcaagaccccctccagccccaaagtcaaccca
aactcctcctcctccatcggcggcgagcgaatcagccggctgtacgagctgggtgcagag
cccgagaggcgagcttgggtggagcggtatctgaccttcatggaggagcggggcacgcct
gtcactcagcttccagttgtgggcaagaaaccactggacctgtggaagctctacatggct
gttcgggagatcggaggcctcgccatggtgaacaaaaacaagaagtggcgcgagctgtcc
agcaccctgaacgtcggtacgtccagcagctctgccagcaccctgaagaagcagtacatc
cagttcctgttcgcctacgagtgtaagatggagcgaggagaggagccgccggccgacagc
aacagcggcagcagcgtgactgaaggggacagcaggaagcaggtcaagatccagccgccc
tcacctgctaattcaggcggctctctccaaggtccacagacgccccagtcctctggcagc
agctcaacagcagaggtagtcggcgacctgaaaccacccacacctgccaccaccccgctg
ggacaagtcactccgctgctccccaacaggagcagtgtgagcgtgcaggaccccttctcg
gaggtgagcgacccggcctttcagaagcgggctaccagcctgcccccctcggctccctac
cagcagggcctcagcatgcctgacatgatgatgaggatgcagtacgacgccaaggacccc
ttcgcagggatgaggaagatggcaggagctgatccttacataccaagccagatgcccagt
ggtggtatgcctgacatgtatggtcggccgccgtcaggcctaagcatgagtcaaaggtca
cagtatccgtacgggtcaggctatgacaggagatcagaccatatgatggggatggagggg
accatgggccccccaggcagtcagaataacatggggcactccaacagtgaaggcagcatg
tactctcccagcagatacccctcccagcagagacacgatggttatggccagcagtattcc
agcatgccatatgggatgcatccgtctgggatgtatccacagcaacagggctacaaacgg
caaatggatggaatgtatggccccccacccaagaggcatgagagtgacatgtacgccatg
cagtacaccaaccagcagccggacatgtacaatcactacggtggtgggtactcaggccca
gaacacagaccaatccagggacagttcccctacccctaccatcgcgaccgtatggcccca
tcgggccagagccagcacagtatgatgggtgggggccccactcctaatcccgctgctgat
gggccgaacatgtggccttcaagaacagaccttggctatccctaccacagcagacaagga
ccgccatcacaaatgccgccgtatggctccatctgcagagacgacatggacggtcggccc
gggcaggaccagtggcaccgccagtctccttacatgtcatcatcaggtggcatgaccccc
ctgtcttcacgccaaccatcatcttattccaactccccatccatggccaatcatctgcct
agagcccccagcccagggccctttcatcgctcaatggaccctcgaatgtcccccagtaaa
gccccattcatgtcacccatgaagatgcctaaacctgggctggctatgatgggcgcacag
agcagtggacccattggtcagtttcctccaaacctgaggagggacctcaattacccccca
gggtcagttgaagccaccttaccacttctcaagcctcgacgcaaactcaactctaaggac
tgtggaacacctgaagcctggcgtgtaatgatgtctctaaagtccggcctgctggcggag
agcacctgggctttagacaccatcaacatcctgctgtacgacgacagcaccgtggcctcc
ttcaacctgtcccagttgcctggattcctcgagttaattgtggagtacttccgccggtgc
ctgattgagatttttggtatcctggaagagtttgaggtcgggacaatggctcataaaaac
catttggattcggattctgtccagacagaagagcctgcccctaatcaagaaacagactcc
accgccctaactggacctgagtcatcctcagcagcagaaacgcaggaggagcagacggca
ggcacagaggagaaagctccacctgcccctgcagaaccagctgaggtgtgcggcaaaaag
gaggattcagatgttggtccgaaaaagaaggagaagaataacaaaaaagaagcagaagaa
gagagggaaaaagaaattaaaaaggagagttcagaccatcctcccgctgatttagagcct
aaacctaaacaagccagcaagtatgataaactccccataaaaattgtgcacaaaggcgac
ctgattgaagacctgattgagcgtttaggttacatcactgagtttaccagtgggcttcaa
cactggcaggcaggcgggggggactccaccgcacacattcagacgcactttgaaccgcag
agtgaaccacctgtcagggaagataaaaaggcaaaaaacgaggacaaacaagaagacaag
atggaaaatcggaaactgctgaagcatatcactgctactattgatgatgttttgtgtgcc
agggttgacgccctctctcatgcccacccggcacgctctctgccatcttacccgttcagg
gtgcatccagatggggaggacgaccacatcacccttctggaggacgagccccgctgcctg
gacgaggctccgctctgcaccacctccgcttggcaggactcactgtccaagagatgcctc
tgtgtctcaaacattgtccggagtctgtctttcatccctgggaatgacatggagatgtca
cgccatcccgctctagttctccttttaggcaggctgcttctgctgcagcacgtgcaccca
gagaggaacaggatggccctgagctatcagagagacgagcagcaggagcgcgagctgtca
agtagcaaagatgagtggtggtgggagtgtctgagtctgctcagggagaacgccatggtc
acactcgccaatatcgcgggtcacctggatctttcttcctattcagacactatttgcctt
cctatcctggacggccttctccactggatggtttgcccctcagctgaagcccaggacccc
ttcccgtcggcagcgccacactcccagctcagtccccagaggctggttctggagtgcctc
tgcaagctgagcatccaggacggtaacgttgacctgatcctggccacgcccccttttagc
agacaagagaaactctttgccatcttggtgcgctgcgtgggtcagaggaaggcgcaggtg
tacagggagatggcagtggctgtcctctcccacctggcacagggagacccgacagcggcc
cgtgccatcgccttgcagaaaggctgcgtgggtaatttggttgccttcttggaagatgga
gtcagcatggcacaataccagcagaatcctcacagcttgctgcacatcggacaccccccc
atggacccgcctagtataaacatgatgtgcagagcggctaagggtctgctggccatggct
aaggtggaagagaacaagacagagtttgtactgtatgaaagcagattattagacatctcc
atttcctcggtgctcaacacaggagtggtggcgatcgtttgccaagttctgtttcactta
gggaagttatga
DBGET
integrated database retrieval system
