Kryptolebias marmoratus (mangrove rivulus): 108236362
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Entry
108236362 CDS
T05608
Symbol
tsc2
Name
(RefSeq) tuberin isoform X4
KO
K07207
tuberous sclerosis 2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04115
p53 signaling pathway
kmr04140
Autophagy - animal
kmr04150
mTOR signaling pathway
kmr04218
Cellular senescence
kmr04910
Insulin signaling pathway
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
108236362 (tsc2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108236362 (tsc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
kmr01009
]
108236362 (tsc2)
Protein phosphatases and associated proteins [BR:
kmr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108236362 (tsc2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Motif
Other DBs
NCBI-GeneID:
108236362
NCBI-ProteinID:
XP_017272436
LinkDB
All DBs
Position
LG3:complement(23201056..23228277)
Genome browser
AA seq
1871 aa
AA seq
DB search
MNKQQSKETLKDKVKGIFGLGTPRPQIKPCDPKLPEFIITSDIIKDLHPDNGLNNRIRVI
NQICDLAKMKRFEEHAVEAVWKAVEDMLTPEQPPEARHAVLQLLRAIIQGQGEWLGLLRA
YFFKVIRDYQPCNEDLSERLDVFKALTENGKDITYLEEDIARFVLLWMDIGLTSDFLHVL
VNLVKFNSCYLDQNVSIMVHKICMLCNRTTSSTDIEVALQVLDAVVCYNCLPSESLTIFI
ITLCRTVNVKEFCESCWKLMRKVLGTHLGHSAIYTMCRIMEERYCHYQMYMEDAPLLRGA
VFFVGMALWGAHRLPALKNTPTLVLPSFYKAMLCANEVVSYEIVLSITRLIKKYGKELQV
VTWDILLGIIEQLLQQILTIGSVELKAIVYELLTTVEELYEQNGYHGSTEKFFSLVEKCA
DKRADASVLTLISYRAQSIQPAKDGWIQSLHRLMEKFFKNETRSVIRIKVLHILSFVLST
NRQLYEDELIEMVVIPQLSGIAEDRDLAVRKQATQLLVDLAEGCNTHHFTSLLDIIERVA
SRSLVCPGALEVSERDPTAESPMEDVKTAVLGLLEILQSKLYSLPASHASRVYELLISHL
QLHYKNKYCSTIASTIRLQVFDFFLMMRADSLHRISVPNKDGAMRFSPYCYCDKGEPEKR
VGDKKPTGSTSPPAGSPAPPAAPPASTASIRSAYLPYAPAFNILLQCLKMEMDWKVLKLV
LDKLPWMLQYKVLLLTSKCSLDQLCSTLCLMVTDRLISDRLKRIPEGFSRTDVQLAVVPV
LTAITSYHNYLEQSRQRELVQCLETGLIYRCAKQCVVALTMCTVEMPDIMIKLLPALIVK
LTHISATVAMASPMLEFLSTLVRLPHLYANFVAEQYVSVFAISLPYTNPSKFNQYIVSLA
HHVIAMWFIRCRLPFRKDFVQYITKGLRSNALLPFDDGQEQSQFRARSTSLNERPKSLRA
AKVSKAAPVANSSSSPVKELRDLSAMDAFRSRSISVSEHAVRRMHTSTTTCSLGSADENA
VTQADEGLKTVHLELTETCLDMMARYVFSNFSALPKRSPIAEFLLAGGRSMTWLVGNKLV
TITTSGGVRTQALLGLDMSERLGGGGEMTRSDPSLHTRITKEAPATLESQSSQQHNRSTR
SRVRSMSGGHALRGGPTQSLSPLVSPSEGELTAPLSPSSGPALDGVGPPSSSSAASSAPP
PLKDNPSLAEFVPMLTQGWAEIFIRRPSGNTSWLMCLENPPSPFSSELGNMPLQELSSVL
MAMEGVKEPPAETSSAPASTAAPAPTSVSEPLNQTQSGVGGKPNLIQRSNTDSVVVLEEG
SGVTTPQTPIEWVEGEDFEPMPSEPIFMTPDKTAPPGTLSRSSSTSSQDDEKSTLEEVSE
GAIPIDQPALGPSTPGSQGPDLPFQSHSQSQGHGLNKSSSSPELQTLPEAFAKANMEAES
VQGDVCRPRAPSDGKPQVQQPLFEKDKAEGGAGGDVNGLGRQNQAGEGSGPSSQSGGLRL
AFPAAPAAQSGPISPGGGHRPRGHTISVSAPSSRRERRTERDSYHNRPGPSNTEKMSGLS
PSFVFLQLYHSPFFGNEANKPLLLPKTQVIDRAVKVLDQMPPYDTHKIGVVFVGAGQVNN
EVAILSNEYGSNRYAAFLTGLGKLIHLKDCDPDQIFLGGLDQYGDDGEFTYCWHDDIMQA
IFHIATLMPNRESDKGCCNKKRHIGNDFVMVVYNDSGEEYKLGTIKGQFNFVEVIIKPLD
YKCNLVSLQCRKDLEGLVDTTVAKIVSDRNLPLLVRQMALHANMASLVHQYRANPSDAYA
SKWLARLRHIKRIRTRAQEDIQSRSTPGISLTQGHAQQNKSFQQNTAAPNPEASGPRKRL
VSTVDDFTDFV
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaacaaagtaaggaaactctgaaggacaaggtgaaggggatctttggactc
gggactccccggccacagatcaaaccgtgcgaccctaagctgccggagtttattataact
tctgacattattaaggatctccacccagataacggcctgaacaaccggattcgggtcatc
aaccaaatttgtgatcttgcaaaaatgaaaagatttgaggagcatgcagtggaggccgtg
tggaaagctgtggaggacatgctgaccccagagcagccgccggaggccagacacgccgtc
ctgcagcttcttagggccattatacagggacagggtgagtggcttggccttttgagggcc
tactttttcaaggtgatcagagactaccaaccgtgcaacgaggacctctcagaaaggctg
gatgtgttcaaggctttaaccgaaaacgggaaggacatcacatacctcgaggaggacata
gcacgttttgttctcctgtggatggacattggtcttacttctgactttctccatgttctc
gtgaatctggtgaagtttaacagctgctacctggatcagaacgtctccatcatggtccat
aaaatctgtatgctgtgcaacagaacaacatcgtccacagatatagaggtggctcttcag
gtcttggatgccgttgtgtgctacaactgcctgccctcagagtccctcaccatttttatt
ataacactctgccgtacggttaatgtgaaggagttttgtgaatcctgctggaagttgatg
aggaaggttttggggactcatctgggccacagtgctatttacaccatgtgccgcatcatg
gaggagcggtattgtcactaccaaatgtacatggaggatgccccgctgctgagaggagcg
gtattctttgttggaatggcactgtggggcgcacacagactccctgccctgaaaaacaca
ccaacacttgtcctgccatccttctataaggccatgttgtgtgccaatgaggtggtgtcc
tatgaaatcgtcctctccatcaccagactgatcaagaagtacggcaaagagctgcaggtg
gtcacatgggacatcctgctgggcatcatagagcaactgctgcagcagatcctgacaata
ggcagtgtggagctgaaggcaattgtctacgagctcctgaccacggtggaagagctgtat
gagcagaacggttaccacggctccacggaaaagttcttcagtttggtggagaaatgtgcc
gacaagagagctgatgcgtcggtgctgacgctcatctcgtaccgggcgcagtccatccag
ccggccaaggacggctggattcagagccttcaccgcctcatggagaaattctttaagaac
gagactcgcagtgtgatacggatcaaagtgcttcatatcctgtccttcgttctcagcacc
aaccgacagctttatgaggatgagctgattgaaatggttgtgatccctcaactcagtggg
atagctgaagacagggatctggctgtcagaaagcaggctactcagcttctggtggatctc
gctgagggttgcaacacgcatcacttcaccagcctcctggacatcattgagcgggtggcc
agtcgttctctggtttgtccaggcgccctggaggtttctgagagagaccccacagctgag
tctcctatggaggatgtcaagacggctgtattgggtctgctggaaatcctgcagagcaaa
ctttacagcctaccagccagccatgcgagtcgtgtttatgagctgcttatcagccacctg
cagcttcactacaagaacaagtactgttcaaccatcgcctccactatcaggctacaggtg
tttgacttcttcctgatgatgcgtgcggactctctgcaccgcatcagcgttcccaacaag
gacggagcgatgagattcagcccgtactgctattgcgacaagggggagccggagaagcgt
gtcggtgataagaagccgacaggttcgacatctcctcctgctggtagtcctgctccgcct
gccgctcctccagcttcaacagcctccatacgctcagcttaccttccctacgctcctgcc
ttcaacatcctgctgcagtgcctcaaaatggaaatggattggaaggtgctgaaactggtt
ttggacaagctgccttggatgctgcagtacaaagtcctgctgctcacatcaaaatgcagt
ttagaccagctctgttccactctctgcctcatggtgacggatcgtctgatttctgaccgt
ctgaaaagaatcccggagggtttttcccgcacagacgttcagttggctgtggttcctgtt
ctcacagccataacctcctaccacaactacttggagcaatcgagacagagagagctggtt
cagtgcctcgagaccggcctcatttatcgatgtgccaagcagtgcgtggtggctcttaca
atgtgcacggtggagatgcctgacatcatgattaagctcctccctgcgctcatcgtcaag
ctcacccacatctctgctaccgttgccatggcatcccccatgctcgaattcctctccact
ctggtgcgtttgccccatctctacgccaactttgtagctgagcagtacgttagcgtgttt
gccatctcgctaccctataccaacccctctaagttcaaccagtatattgtgtctctggcc
catcacgtgatcgccatgtggttcatacgctgcagacttcccttccgcaaagactttgtt
cagtacatcacaaagggcttgcgttccaacgccctgctgcccttcgatgacggccaagag
cagagccagtttcgtgctcggagcaccagcctcaacgaaaggcccaaaagtctgcgagct
gcgaaagtgtcaaaggcggcccctgtagccaatagcagcagctctccagttaaagagctg
agggacctttcagccatggatgctttccgctcccgcagcatcagcgtctccgaacacgcg
gttcgcaggatgcacacctcaaccaccacctgcagtttgggctctgccgatgaaaacgct
gtgactcaggccgacgaggggctgaagacagtccacctggagctcacagagacctgtcta
gatatgatggctcgatatgtgttctccaacttctccgcgctgcccaagaggtctcccatc
gcagagttcctgttagccggaggtcgcagtatgacctggctggtggggaacaagctggtg
accatcacaaccagcggaggcgtaagaacgcaagcgttgctgggcctggacatgtctgaa
cgcctgggaggaggtggagaaatgaccaggtcagatccgtctctgcacacacggataacc
aaagaggctccagccacactggagtcccagtccagtcagcaacacaaccgatccacacgc
tcccgtgtccgctccatgtcagggggtcacgctctacgtggtggtcctacccagagtctc
agccctctggtctccccctctgagggggagctcactgctcctctgtctccctcctcgggc
cccgctctggatggtgtcggtcctccctcgtcctcctctgccgcctcctctgctcctcct
cctctcaaagataaccccagcctggctgagtttgtgccaatgctcactcagggctgggca
gaaatcttcatacggagaccttcaggcaacaccagctggctgatgtgtttggagaacccg
cccagtcccttttcctcggagctcggcaacatgccgctgcaggagctgtccagcgtcctg
atggcgatggagggagtgaaggagccccccgctgagacatccagcgctccagccagcaca
gccgccccagcacccacatctgtctctgagcctctgaaccaaacgcagagcggtgttgga
gggaagccaaacctgatccagcgttccaacaccgactctgtggtggtgctggaggagggg
tcaggggtcaccacacctcagaccccaattgagtgggtggagggggaagactttgagcca
atgccctccgagcccatattcatgactcctgacaagacggctcctcctggaacgctcagc
aggtcgtcctccacctccagtcaagatgatgaaaagtcaactctggaggaggtgagtgaa
ggagcgattcccatcgaccagccagctctgggcccctccaccccaggcagccaggggccc
gacctcccatttcagagccactcccagtcccagggtcacggactcaacaagtccagctcc
tccccggagctccagacgctgcctgaggccttcgccaaagctaatatggaggctgagagc
gtgcagggagacgtctgccggcccagagcgccctcagatggcaaacctcaggtacagcag
cccctttttgaaaaggacaaggcagaggggggagcaggaggggacgtaaacgggcttgga
cgtcagaaccaagcaggagaaggctccggtccgtcatctcagagtggagggttgaggttg
gcttttccagcagcaccagcagcacaatctggacccatctcacctggcggaggccaccgc
ccccggggtcacaccatttctgtttcagccccgtcctccaggagagaaaggaggacggag
agggactcgtatcacaatcgacccggacccagcaacacggagaagatgtccggtctgagc
cccagctttgtattcctccagttgtaccactctcctttctttgggaatgaagccaacaag
ccgctgctgctgcctaaaactcaggtgatcgaccgagctgtgaaggttctggaccagatg
cctccttatgacacccataagattggagtggtgtttgttggagccggtcaggtgaacaac
gaggtcgccatcctgtcgaacgaatacggctcaaaccgctatgccgccttcctgacaggc
ctggggaagctgatccacctgaaggactgcgaccccgaccagatctttcttggagggctg
gaccagtacggagacgatggagagttcacgtactgctggcacgatgacatcatgcaggcc
atcttccacatagctacactgatgccaaacagagagagcgataagggctgctgcaacaag
aagcggcacattggcaacgatttcgtcatggtggtgtacaacgactccggagaggagtac
aaactgggcacaatcaagggtcagtttaattttgtagaagtcatcattaaacccctggat
tataaatgtaaccttgtttcccttcagtgccgcaaagatctcgagggtttggtcgacacc
acagtggcgaagatcgtttctgatcgcaaccttccacttttagttcggcagatggccctg
catgcaaacatggcctccttggtgcaccagtacagagcgaacccctccgacgcgtacgct
tccaagtggctcgcaagattacggcacataaagaggatcagaaccagagctcaagaagac
atccagtcccgctcgactcctggaatctctctgacccaaggacacgctcagcagaacaag
tcgttccagcagaacacggcggctccgaaccccgaggcctccgggccgagaaagagactc
gtgtcgacagtggacgatttcaccgacttcgtttga
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integrated database retrieval system
