Kryptolebias marmoratus (mangrove rivulus): 108236379
Help
Entry
108236379 CDS
T05608
Symbol
si:dkey-156n14.5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108236379 (si:dkey-156n14.5)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108236379 (si:dkey-156n14.5)
Spliceosome [BR:
kmr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108236379 (si:dkey-156n14.5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108236379
NCBI-ProteinID:
XP_017272481
UniProt:
A0A3Q3H196
LinkDB
All DBs
Position
LG3:24829823..24838557
Genome browser
AA seq
661 aa
AA seq
DB search
MRGGSSYGDRDRDRDRGRDRPRFGGGMGGRGGPPPMKFGNPGERLRKKRWNLDELPKFEK
NFYTEHPEVQRMGQYDVEEFRRKKEITIRGSGCPKPVTAFHQAHFPQYVMDVLMQQNFKE
PTAIQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPT
RELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGK
TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQLAEDFLRE
YIQINIGALELSANHNILQIVDVCMETEKDNKLIQLMEEIMAEKENKTIIFVETKKRCDD
LTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINY
DYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVD
SGRGGGGGGRMRYRGGSSNNPNLMYQEECDRRMRSGGGGGGKDSRGGFSRDNRNSRNEDR
SSSSSYRDRSRDHRNNYDSGSDQYQSYNNNNSSSSGGGGYNSRSGGGQPGGGGQDQPGQQ
QQQQQGQFNQAPPPPPSGGPQPLMAQQFAPPQPPLMGFMGQPPYPFSSPPPPPPGPQPPR
K
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggttcttcatacggagacagggacagagacagagatcgtggacgggacagg
ccacgatttggggggggcatgggtggccgcggtggccccccacccatgaagtttggcaat
ccaggtgagcgtctccgcaagaagaggtggaaccttgacgagctgccaaaatttgagaag
aacttctacaccgaacacccagaagtccagcgaatgggccagtacgatgttgaggagttt
cgcaggaagaaggagatcaccatcaggggctcaggatgtccaaagcctgtaactgctttt
catcaggcgcactttcctcagtatgtgatggatgttctgatgcagcagaacttcaaggag
cccacagcgatccagtcccagggtttccccgtggcgctgagtggcaaggacatggtggga
atcgctcagactggctctggaaagacgctggcttaccttcttcctgctattgtacacatt
aaccaccagccgtatctggagaggggcgatggtcccatatgtctggttcttgccccgacc
agagagctggcccagcaggttcagcaggttgcattcgactacggcaagtcttcccgtatc
aaaagcacctgcgtctacggcggagcgccgaaaggaccacagattcgagaccttgaaagg
ggcgttgagatctgcatcgccacacctggtcgccttattgacttcttggaggctggaaag
accaacctgcgccgctgcacctacttagttctggatgaggccgaccgcatgctggacatg
ggctttgaaccgcagattcgcaaaatagttgaacaaatcaggcctgacagacagactctt
atgtggagcgcaacatggccgaaggaggtccggcagctcgctgaggacttcctgagggaa
tacatccagattaatatcggtgctctggagctcagcgcaaaccacaacatcctgcagatc
gtcgatgtctgcatggagaccgaaaaggacaacaaacttattcagctgatggaggagata
atggcagagaaggagaacaaaaccatcatcttcgtggagaccaagaaacgatgtgacgat
cttactcggaggatgagacgcgacgggtggccagccatgtgtatccatggagacaagagc
caaccagaaagagactgggtgcttacagaattcagaagcggcaaagcccccattctgatt
gcaaccgatgttgcctctcgtggtctggacgtggaagatgtaaagttcgtcatcaactat
gactatccgagctcctccgaggattacgtccatcgtatcggacgtacggcccgcagtacc
aataagggcacggcttacaccttcttcaccccgggaaacctgcggcaggcccgggatctg
gtccgggttctggaggaagctcggcaagccatcaatcctaaactgcttcagctggtggac
tcgggccgcggaggaggaggcgggggcagaatgcgttaccgtggcggcagctccaacaac
ccaaatctgatgtatcaggaagagtgcgaccgccgcatgcgctctggcggcggtggaggt
ggcaaagacagccgcggtggcttcagccgcgacaaccgcaacagccgcaacgaagaccgc
tcctcgtcctcctcctacagggacagaagccgggaccacaggaacaactacgactcgggt
tcggaccagtaccagagctacaacaacaacaacagcagcagcagcggcggtgggggctac
aactcccgcagtggagggggccagcccggcggtggcggccaggatcagcccggccagcag
cagcagcagcagcagggtcagtttaatcaggcgcctcctcctcctccatcaggaggtccg
cagcctctgatggctcagcagttcgccccgcctcagccgccgctcatgggcttcatgggg
cagcctccatacccgttctcctctccgcctcctcctcccccgggcccacagccgccccgg
aagtaa
DBGET
integrated database retrieval system
