Kryptolebias marmoratus (mangrove rivulus): 108236381
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Entry
108236381 CDS
T05608
Symbol
tmc8
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108236381 (tmc8)
03037 Cilium and associated proteins [BR:
kmr03037
]
108236381 (tmc8)
Transporters [BR:
kmr02000
]
Other transporters
Pores ion channels [TC:
1
]
108236381 (tmc8)
Cilium and associated proteins [BR:
kmr03037
]
Other cilia and associated proteins
Stereociliary proteins
108236381 (tmc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
108236381
NCBI-ProteinID:
XP_017272484
LinkDB
All DBs
Position
LG3:23535300..23543762
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AA seq
696 aa
AA seq
DB search
MEDQKNVNFMRLMSDESIQSTLSSDSYEYYQTEIFDLLPSVQASRPEQDRHGALDANEVY
GGAPGSAEDSGHGVGTRDKTSLQPLRNLALCMQGKRGARERRKMQISNIGFWESWRRSQA
NNRRRVWVQMGEVATGLLPWRHTLHKIQGKFGVGVKAYFIFLRYLIYLNLLHCLLIGGFI
IGPTLYYSNRTEHLRFEENDSVLDTLLGSGFLDRSPVFFGFYEPGSLNLPCLNTPLLYRA
GILTIFFLSLIMVVRRTIVGYKHTWLLGKRYSMNVSFKIFCGWDFNIQDPSAAALKHSFI
RNDLKLFLEEQSFSLRKAQRTLGQKVLLYLLRFILNIIVISLLGGAFCLIYLSSKYLETT
DGHGWLAKLVLQYLPPITITFVNLVLPHIFRKISSFEDYSLTVQVNTTLVRSIFLKLASL
GIFLVFVFKSNTNQQTSQCRENQFGREMYKLCIFNFLATFSTTFLLNYPRKLLQEKYPTS
LLARLSGKQRFLIPFNVLDLVYIQTVSWVGVYYCPLLPLIGIITLVFTFYIKKFSVLRCC
VAEQRMFRASSSSVLFYFMLLLSLFMAAAALVFDFYHSKEKNMTFCGPFLNEKTVFNVTE
DCVSSLPSSVQNTLRYLASEAFALPLILAEIIILTSYVSRGRANQKAIERLKDMLVVSNS
DKRFLVKEHATLLRSRKNVTRSPSEGRPVSVDRLQL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccagaaaaatgtgaacttcatgagactcatgtcagatgaaagcattcagtcc
accctgtcctcggactcatatgagtactatcagacagagatatttgacctgctgcccagt
gttcaggcttcccggcctgagcaggacagacatggtgctttggacgccaatgaggtctat
gggggcgctccggggtctgcggaggactccggccacggtgtcggaaccagagacaagacg
tctttacagccactcagaaacctggccctgtgtatgcaggggaagagaggagccagggaa
aggaggaagatgcaaatcagcaacattggcttttgggagtcttggaggcggagccaggcc
aacaacaggaggagggtttgggttcagatgggagaggtggcgacaggcctgttgccatgg
cgacacacgctccataaaatccaggggaagtttggagtaggcgtgaaggcctattttatt
ttcctcagatatctgatttaccttaacctgctccactgccttctcatcgggggattcatt
attgggcccacattatattatagcaacagaactgaacatctgagatttgaagaaaacgac
tcagttttagacaccttacttggatcggggtttctggatcgttctccagttttctttggt
ttttacgaacctggctctctgaatttgccctgtctgaacacacctctgttgtaccgcgct
ggaatcctcaccatcttcttccttagtctcatcatggtggtccgcagaactattgttggc
tacaagcacacctggttgctggggaagcgttacagcatgaatgtgagctttaagatcttc
tgcggctgggacttcaacatccaggatccttcagctgctgctctcaagcatagcttcatc
cgaaatgatctcaagctgttcctggaggagcagagcttctccttgcgtaaggctcagagg
acgttaggacaaaaggtgcttctctacctactcagattcatcctcaacataattgttata
tctctgcttggaggagcgttttgcctcatctacttgtcatcaaaataccttgaaacgact
gacggccacgggtggttggccaagctggtccttcagtatcttcctccgatcaccattaca
tttgtgaacctagtcctccctcacatcttccgcaagatctcatcatttgaagactactcc
ttgactgtgcaagtgaatacaacacttgtgaggagcatcttcttgaaactggcctccctt
gggatcttcttagttttcgtcttcaaatcaaataccaatcagcaaacttctcagtgcagg
gaaaaccagtttggcagagagatgtacaagctgtgtatcttcaacttccttgccactttc
agcaccacttttcttttgaactaccccaggaagcttttgcaggagaagtacccaacatcg
ttgctggctcggttgtctgggaaacagcgttttctgatcccgttcaatgtcctggacctg
gtttatattcagaccgtgtcctgggtgggagtttattactgccctctgctgcctctgata
ggaatcatcacactggtgttcacattctatatcaaaaagttcagtgtcctgcgatgttgc
gtagcagagcagcggatgtttcgagcctccagctcctcagttttattttatttcatgctg
ttacttagtctcttcatggctgcagctgcactggtctttgacttctaccactccaaagag
aaaaacatgacgttctgtggtccatttctaaatgaaaaaactgtgtttaatgtaacagag
gattgtgtatccagtcttcccagctcagtccagaacactcttcgctacttggcctcggag
gcctttgccctgccacttattttagctgagatcatcatcctaacctcatatgtttcaaga
ggacgagccaaccagaaggcaattgagagactcaaagacatgctggttgtgagcaactca
gacaagcgtttcttggtgaaggagcacgccacattgctgagaagtcggaagaacgttacc
cgatcaccttctgaaggacgccccgtgtcagtcgacagacttcagctttaa
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