Kryptolebias marmoratus (mangrove rivulus): 108236401
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Entry
108236401 CDS
T05608
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108236401 (rnf38)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108236401 (rnf38)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108236401 (rnf38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108236401
NCBI-ProteinID:
XP_017272516
UniProt:
A0A3Q2ZBD3
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All DBs
Position
LG3:25575186..25598314
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AA seq
740 aa
AA seq
DB search
MPIAAAGQPTTQEPRVCPRLPSTPEPVPKGADLFDEAGAAAECSEGGRGLGGYSFSQSGA
RSFAQPPGSTIGSPPQSPAATSSFFLQFPHPHPHQMAMEPPRTRSRSRSGYYQQYGVGNT
SGVTVSNHQQQQQHHQQQQLHPQHHHQQQQLHGAGCAPLGAHSNHTENQQRPPGSTGPPG
IQRFPSVPGVHHIPVAGASGGAYHCHPDHAYGEETDKSEESPSPKRQRLSSQSVLEQLTS
SAPPPSTPSPPIRPWESGPPSRRQPHPHTHYHQERCLTPARLRRSPPARRQRGRLSRPPR
HLPPHHHASAQGPIARLSPSELQDENYHHSSHLSTHQTYPSHTPSNYGQPPVVGGGSSEE
PRAFHPPALSPQLLHPAAHHHPHHHHPHQQQHHATQQQQGAMVMDLHERLQQSSVPVSYT
VTPVPPHGLPAPLCSSQHLPPSCSSQPQVPACSVVFSTGQHYHPMLQACSMHHLPVPYAF
PSLLSSDPQFLISPSPHLSHAPPHLPTHAQFLPFQTQQPRSPLQRIENEVDIVGEQLPVG
GSFSYAHHHHHHHHHQPPSTLPPSTPLQFLSHHDPLSQELFTVPYPHFMPRRFTSRRYRS
QQAVPPSPYHPSFLPYFLSMLPVPPNVAPAISLELDVDDGEVENYEALLNLAERLGEAKP
RGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLK
ANRTCPICRADASEVQRDSE
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgcagccgctggacaaccaacgactcaggagcccagagtttgcccccggctg
ccctccaccccggagcctgtccctaaaggggctgatttattcgacgaggcgggggcggcg
gcggagtgctcggaggggggcagaggactcgggggctacagtttcagccagagcggggcg
aggagctttgcgcaaccgcctgggtcgaccatcggctctccgccgcagtccccggccgcg
acctcctccttcttcctccagttccctcacccccacccccaccaaatggccatggagccc
cccaggactcgatcgcgctctcgctccgggtactaccagcagtacggtgttgggaatacc
agcggagttacggtgtcgaaccaccagcagcagcagcagcaccaccagcagcagcagctc
catccccagcaccaccatcagcagcagcagcttcacggtgccggctgcgcgccactcgga
gcacacagcaatcacacggagaaccagcagcgaccaccaggaagcaccggcccccccggc
atccagaggttcccctctgttcccggagtgcatcacatcccagtggcaggagcctctggt
ggagcgtatcactgccaccctgaccatgcttatggagaggagactgataagagtgaggaa
agccccagtccaaagcgccagaggctgtccagtcagtccgtcttagaacagctgacctca
tctgcacccccaccatccaccccatctcctcccatccgcccctgggagtcagggccccca
agtcgacggcagcctcaccctcacacacactaccaccaggagaggtgtctcactcctgca
cggctcagacgcagcccgccagcgaggcgtcagcgtggccgtctctccagaccccctcgt
cacctgcctccacatcaccatgcttctgctcaaggccctatagctcgcttgtcaccgtcc
gaacttcaggatgagaactaccaccacagctctcatctctccacacatcagacataccca
tcacacactccaagcaattatggtcagccccctgtcgtcggcggtgggagttcagaagag
ccccgagcctttcaccccccagctttgtcacctcaactactgcacccagctgctcaccac
catccacatcatcatcatcctcaccagcaacagcatcatgcaacgcagcagcagcaagga
gccatggttatggatttacacgaacggctgcagcagagcagtgtcccagtctcctacacg
gtgaccccagtccctccacatggcctcccagcgcctttgtgtagcagtcagcatcttccc
ccttcctgctcctcacagccacaagtccctgcctgtagcgtggtcttcagcactggacaa
cactatcatccgatgttacaggcatgttccatgcatcatttgccggttccctatgccttt
ccatccctactgtccagtgaccctcagttcctgatatcgccttctcctcatctctctcac
gccccgcctcacctcccgacacatgcgcagttcctgcctttccagacgcaacagccacga
tcgcccttacagaggatcgaaaatgaggttgatattgtgggagagcagcttcctgttgga
ggaagcttcagctatgcccatcatcaccatcaccaccatcatcaccagcctccctccaca
ctgccgccttctactcctctccagttcctttcgcaccatgaccccctgtcacaagagctc
tttacagtgccatatcctcactttatgcctcgtcgcttcacgagcagacgttaccgctcg
caacaggccgtgcccccctctccctatcaccccagcttcctgccttactttttgtctatg
cttcctgtgcccccaaacgtagctcctgctatcagtctagaactggatgtggatgatgga
gaggtggaaaactatgaggcactgttgaacctcgccgagcgtctgggagaggccaagccc
cgcggtctaaccaaggctgatatcgaacagcttccatcatacaggttcaaccccaacaac
catcagtctgagcaaactctatgtgtggtgtgcatgtgtgactttgagtctcgccagctg
ctcagggtattgccctgtaatcacgagttccatgccaagtgtgtagacaagtggctgaag
gctaaccggacctgccctatctgtcgagccgacgcctcggaggtccagcgggactctgag
tga
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