Kryptolebias marmoratus (mangrove rivulus): 108236450
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Entry
108236450 CDS
T05608
Symbol
vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04140
Autophagy - animal
kmr04148
Efferocytosis
kmr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108236450 (vps33a)
04148 Efferocytosis
108236450 (vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108236450 (vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108236450 (vps33a)
Membrane trafficking [BR:
kmr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108236450 (vps33a)
Hops complex
108236450 (vps33a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Takusan
Motif
Other DBs
NCBI-GeneID:
108236450
NCBI-ProteinID:
XP_017272597
UniProt:
A0A3Q2ZQC0
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Position
LG1:complement(13421893..13426914)
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AA seq
600 aa
AA seq
DB search
MAAHLSYGRVNLNILREAARKELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKSGRLPSADVKNIIFFVRPRLELMDIIADNIISEGKAHSSRDYHILFVPRRSML
CERWLKEQGVLASFTNIDEYILDLIPYDGDLLSMEYESAFRECYLENDQTSLYHTAKGLM
TLQALYGTIPQIFGKGDCARHVANMMLRMKREFAGTQNQILPVFDTLLLLDRNVDLLTPL
ATQLTYEGLIDEIYGITNGYVKLPPEKFAQKKQGEASKDLPTEPKKLQLNSAEELYAEIR
DKNFNAVGAALSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARSSLANHTSIAEL
IKDITTSEAFFDNLTVEQEFMTGVDTDKVNTYIEDCIAQKDPLIKILRLVCMQSVCNNGF
KQKVLDFYKREILQTYGYEHMLTLNNLEKAGFLKTQTGSRNNYPTIRKTLKLWMEDANEQ
NPNDISYVYSGYAPLSIRLTQVLARPGWRSIEEVLKMLPGPHFEERQPLPSGLHKKRQQG
ENRTTLVFFLGGVTYAEIAALRFLSQMEDSGMEYVIATTKLINGTTWIKSLMDRPESQMP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcatctgtcgtacggaagagtgaatttaaacatattgagagaagcggcacgg
aaagagctgcgagagtttttggacaaatgcgccgggagcaaggccatagtttgggatgag
tatctgacgggaccttttggactcatagctcagtactcccttctgaaggaacatgaagtg
gaaaagatgttcaccctgaagagtggcaggctcccctctgctgacgtcaaaaacatcatc
tttttcgtccgtcccaggctggagctcatggacatcattgctgacaatataatcagtgag
gggaaggcgcattcgtcacgggactaccacattctgtttgtgccgcggcggagcatgctg
tgcgagcggtggctgaaggagcagggcgtgctggcctctttcaccaacatcgacgagtac
atcctggacctgattccttacgacggcgacctgctctccatggagtatgaaagcgctttc
agagagtgctacctggaaaatgaccaaacgagcctgtaccacacagccaaaggcctcatg
accctgcaggcgctgtatggcaccattccacagatctttgggaaaggagactgcgcacga
catgtggccaacatgatgctgcggatgaagagggagtttgctggcactcagaatcaaatt
ctgccggtgtttgatactcttctcctcctggaccgtaacgtcgacctgctcaccccgctg
gctacgcagctcacctacgaaggtctcatcgatgagatctatggaataaccaatggatac
gtcaagcttcctcctgagaagtttgcgcagaagaagcaaggtgaagccagcaaagattta
cccacagagcccaagaagctgcagctcaactcggcagaggagctgtacgctgaaatccgg
gacaaaaactttaacgccgtcggcgccgcgctcagcaagaaagccaaaattatatctgct
gcttttgaggaacgccacaacgccaaaacagtgggagaaataaagcagtttgtgtcccag
ctgcctcacatgcaggcagcacggagctccctggctaaccacacttctatcgccgagctg
attaaggacataaccacgtccgaggccttctttgacaacctcacagtggagcaggagttt
atgacgggtgtcgacacagacaaggtgaacacatacatagaggactgcattgcccagaaa
gatccgctgatcaagattctgcgtttggtgtgcatgcagtcagtctgcaacaacggcttc
aagcagaaggtgttggacttctacaagagggagatactccagacatatggctatgaacac
atgctaacgctcaacaacctggagaaggcgggttttttgaagacgcagacgggctcaaga
aataactaccccactattagaaaaacccttaagctgtggatggaggatgccaatgagcag
aacccaaacgacatctcgtatgtgtacagcggctacgctccgctcagcatccggctgact
caggtgttggcgaggcccgggtggcggagcatcgaagaggtgctaaagatgcttccgggc
ccacactttgaggagagacagccgctcccgtctgggcttcataaaaaacgccagcagggg
gaaaatcgaacaacgctggttttcttcctcggaggagtgacgtacgcagaaatagccgct
ctccgtttcctctctcagatggaagacagcgggatggagtacgtcatagccaccaccaag
ctcatcaacggcacgacctggatcaaatccctcatggatcggcccgaatcccaaatgccc
tga
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