Kryptolebias marmoratus (mangrove rivulus): 108236494
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Entry
108236494 CDS
T05608
Symbol
tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kmr02000
]
108236494 (tmc1)
03037 Cilium and associated proteins [BR:
kmr03037
]
108236494 (tmc1)
Transporters [BR:
kmr02000
]
Other transporters
Pores ion channels [TC:
1
]
108236494 (tmc1)
Cilium and associated proteins [BR:
kmr03037
]
Other cilia and associated proteins
Stereociliary proteins
108236494 (tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
COX16
Na_K-ATPase
UPF0542
Motif
Other DBs
NCBI-GeneID:
108236494
NCBI-ProteinID:
XP_017272649
LinkDB
All DBs
Position
LG1:complement(13282878..13296155)
Genome browser
AA seq
1041 aa
AA seq
DB search
MQLTHHTPALQDTRTHLHVLFLWQRTYLDEAPACDAEDAAAVRSIKACSSIRLQLTSPLD
AAGSLCEGIQDHERKMPRDSLIPSENDTDIELDFAGEDDFQEAHERKKHRGQRRDTDREK
KRRKNSRRKEASSSADREKELQPRHKKTERSRRRSAKNEQETKRSKRDEEGRGQTTRRKT
AKTKKNIKNEKTKKTDDEMEGEAGERNEKGKKKHGSAKKGERKEGGSEHVAKEKTQVKKK
KKRHKKVVETSSDQETSEEGDDEENANEDEEVRPESLSPEELEKLKEAVDEKKKLIQSLR
GKPWLMKKKLVTLRESQEFVEKYEGALGKGKGRKLYAYKVMMTKRWMKFQRDFENFKTAC
IPWEMKIKEIESHFGSSVASYFIFLRWMYGINMILFGLTFGLVMVPEALMGRPYGTIPRK
TVPRAEEASAMDFAVLWDFKGYAQYSVLFYGYYNNQRAVGWLKFRMPLSYFLVGVGTVAY
SYMVVIRTMARNANESGIGDDNSFNFSWKTFTSWDYLIGNPETADNKFASITTSFKEAIL
EEQESRKDDNIHLTRFLRVLANFLVLCCLAGSGYLIYFVVRRSQKFTLDGLENHTWWERN
EVNMVMSLLGMFCPMLFDVISTLENYHPRVALQWQLGRIFALFLGNLYTFIIALMDEINL
KREEEKIVKFNITTWEASLYNGTVSGNFTAPPVTIHPADVPRGPCWETMVGQEFVRLIIS
DTMTTYITLLIGDFLRAVLVRFLNYCWCWDLEAGFPSYSEFDVSGNVLGLIFNQGMIWMG
AFYAPCLPALNVLRLHVSMYLQCWAVMCCNVPQERVFKASGSNNFYMAMLLVILFLSTLP
AIYTIVTIPPSFDCGPFSGKNRMFDVIQETLESDFPAWFSKVFSYASNPGLVLPFILLMV
LAIYYLQSTSKSYKQANVELKKKLQMQNEENKKKNKRAALKAQLDLEEARKEASQAGELQ
KNNNASIQSQEADEENHSRNPRIYHGRNGRGPPPFTDREPSTRGPVSRNYHHGNLSTPRY
LPGFSQQSDPTTYRASNLQNP
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttactcatcacacaccggcccttcaggacacgcgcacccacctacatgttttg
tttctgtggcagcgcacgtacttggatgaggcccccgcttgtgatgcagaagatgcagca
gcggtgaggtctattaaagcctgcagctccattcgtctccagctcacttcacctctggat
gctgcagggtcactctgcgaggggatacaggaccatgagaggaagatgcctcgagacagt
ttgatcccctcagagaatgacactgacattgagctggactttgccggtgaagatgatttt
caagaagcacatgagaggaagaaacacagagggcaaagaagagatactgacagagagaag
aagaggaggaagaatagcaggagaaaagaagcatcttcatcagcagacagagaaaaagag
cttcagccaaggcacaagaaaacagaaaggagcaggagaagaagtgcaaaaaacgaacaa
gaaacaaaaagaagtaagagggacgaggaaggccgaggccaaacgaccaggcgcaagaca
gcaaaaacaaagaagaacatcaaaaatgaaaaaacaaaaaagacagacgatgagatggag
ggagaagctggagaaagaaatgaaaaaggaaaaaagaaacatggaagtgccaaaaaaggg
gagcggaaggagggtggaagtgaacacgtggcaaaagagaaaacacaagtgaagaagaag
aagaaaaggcacaagaaggttgttgaaacaagttcagatcaggagacgagcgaggaaggc
gacgatgaagaaaatgccaacgaggatgaggaggtgaggccagagtctctgtccccagag
gagctggagaagctgaaggaggccgtagatgagaagaagaaactgatccaaagtctgagg
ggaaaaccgtggttgatgaaaaagaaactcgtcactttacgagagtctcaagagtttgtg
gagaaatatgaaggagctctggggaaaggaaaaggcaggaagctctatgcctacaaggtg
atgatgaccaagaggtggatgaagttccagcgagactttgaaaacttcaaaactgcctgc
atcccatgggagatgaaaataaaggagattgaaagtcattttggttcctcagtcgcctca
tacttcatcttcctgaggtggatgtatggcatcaacatgatcctgtttggactgaccttt
ggcctggttatggtaccagaggctctgatgggacggccctacggcaccatcccaagaaag
acggttcccagagccgaggaggccagtgccatggactttgcagtcctgtgggactttaag
ggttacgctcagtattcagtcctcttctatggttattacaacaaccagcgagccgttggc
tggctcaagtttcgaatgcctctgtcatacttcctggtcggtgtgggcacagtggcctac
agctacatggttgtcataagaacgatggctcgtaatgcaaacgagtcagggattggagat
gataacagcttcaacttcagctggaaaacgttcaccagctgggattatctgataggaaac
cctgagactgcagacaataagtttgcctccatcaccaccagcttcaaggaagcgattcta
gaggagcaggagagccggaaggacgacaacatccatctgactcgtttcctgcgcgtgctg
gcgaatttcctggtcctgtgctgcttagcaggaagtgggtatctcatttacttcgttgtg
cgccgctctcagaagtttaccctggatggtctggagaatcacacctggtgggaaaggaat
gaggtcaacatggtcatgtcgttactgggaatgttctgccccatgttgttcgacgtcatc
agcaccctggaaaactaccaccctcgtgtcgccctgcagtggcagctgggtcgcatcttt
gctcttttcttaggaaacctctacaccttcatcatcgccctcatggacgagatcaacctt
aagagagaggaggaaaagatagtgaagtttaatataaccacgtgggaggccagtctctac
aacggcacagtgtcaggaaacttcaccgctccgcccgtcaccatccaccctgccgatgtg
ccgagagggccctgctgggagacgatggtggggcaggagtttgtccggctgattatatca
gacaccatgacaacctacatcaccctgctgattggtgatttcctaagagctgtgctcgtc
cgttttctgaactactgctggtgttgggacctcgaggctggatttccttcctactctgag
tttgacgtcagtggaaacgtcttggggctcatcttcaatcaaggaatgatatggatggga
gccttctacgccccctgcctgccggccctaaacgtcctgcggctccacgtgtccatgtac
ctgcagtgctgggctgtgatgtgctgcaacgtgccgcaggaacgggtcttcaaagcttcg
ggctctaacaacttctacatggccatgctgctggtcatcctcttcctgtccactctgccg
gccatctacaccatcgtcaccatccccccttcgtttgattgcggacccttcagtggcaag
aaccggatgtttgatgtgatccaagagacgttggagtcagatttcccagcctggttcagt
aaagtgttcagctacgcctctaaccctgggctggtgctcccttttatcctgctcatggtg
ttggccatttattacctgcagtccacatccaaaagctacaaacaagcaaatgtagaactg
aagaaaaaactacaaatgcaaaatgaggaaaacaagaagaagaacaaacgagctgcgctg
aaagcacaactggatctggaggaggccagaaaagaagcatctcaggctggagagctgcaa
aagaacaacaacgcttcaatccaaagccaagaagcagatgaagaaaaccacagcagaaat
cccaggatttaccatgggaggaatggacgaggccctcctcccttcacggacagagaacca
tcaaccagaggtcctgtttccaggaactatcaccacggcaaccttagtacgcctcgatac
ctgcctggtttctctcagcaaagtgatcccacgacgtacagggcgtcgaacctgcagaac
ccctga
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integrated database retrieval system
