Kryptolebias marmoratus (mangrove rivulus): 108236517
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Entry
108236517 CDS
T05608
Symbol
rnf34a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34a isoform X3
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108236517 (rnf34a)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
108236517 (rnf34a)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
108236517 (rnf34a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
ARMET_C
FYVE_CARP1-2
Prok-RING_4
FYVE
zf-C3HC4_2
zf-RING_5
DUF7573
AAA_lid_2
Motif
Other DBs
NCBI-GeneID:
108236517
NCBI-ProteinID:
XP_017272689
LinkDB
All DBs
Position
LG1:complement(12904724..12911749)
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AA seq
395 aa
AA seq
DB search
MKAGASSVWASCCGLLNEVMGTGAVRGQQPGFGAGAGPFRFAPSAGYSTYPPSSSGSPNP
VCKTCGQAFSVFRRKYVCADCKKSFCSLCSVLQENLRVCATCHLLKATAFQRPRLMRLRV
KDLRQYLLLHSISSDTCREKEDLVELVLRHRGIEEEEEDEEEEEEEEEEGEECDPDTTGL
FSRSMFTPSATQSATELSAYNASPPPEEERLSRSDSSDTNQDMGLVTSESLLNLDSSERT
PEASPQMRRRARGSLSDISSLRDIEGLSVRQLKEILARNFVNYSGCCEKWELVERVSRLY
RETEQNRKSLENVSRTVTTVMAFPPPICNGAVRDGENCPLTIHDDNLCRICMDAVIDCVL
LECGHMVTCTKCGKRMSECPICRQYVVRAVHVFKS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggggcctcatccgtgtgggcttcatgctgtggtctgctgaatgaagtcatg
ggtaccggggccgtccgaggccagcagccggggttcggggccggggctggacccttccga
ttcgcccccagcgcgggatactccacctacccgccctccagctcagggagccccaacccg
gtgtgcaagacctgtggccaggccttttcagtattcaggaggaagtatgtttgcgccgac
tgcaagaagagcttctgctctctgtgcagcgtgcttcaggagaacctgcgcgtttgtgcc
acctgccacctgctgaaggccacggcctttcagcggccacggctcatgcgcctgcgagtg
aaggacctgcgtcagtacctgctgctgcacagcatcagctccgacacctgcagggagaag
gaggacctggtggagttggtgctccgccaccggggcattgaggaggaggaggaagacgaa
gaggaagaggaggaggaggaggaggagggggaggagtgtgatcctgacacgaccggcctc
ttctcgcgctccatgttcactccttccgccacgcagtctgccacagagctgtctgcttac
aatgcctccccccctcctgaggaggagcggctcagcaggagcgacagctccgacaccaac
caggatatgggcctcgtcacatcggagtctctcctcaacttggactccagcgaacgaact
ccagaggcaagtcctcaaatgcgccgccgggccagagggtccctctctgacatttccagt
ctgagggacatcgaaggcctctccgtccggcagctgaaggaaatcctggccaggaatttc
gtcaactactcggggtgctgtgagaagtgggagctggtggagcgagtcagccggctgtac
agggagacggagcagaacaggaaatcattggaaaatgtgagcaggaccgtaaccacagtg
atggccttcccccctcctatctgcaatggtgccgtcagagacggcgagaactgcccgctg
acgattcacgacgacaacctctgcaggatctgcatggacgccgtgatcgactgcgtcctc
ctggagtgcggccacatggtcacctgcaccaagtgcggcaagaggatgagcgagtgtccg
atctgcaggcagtacgttgtgagggccgtgcacgtcttcaagtcctaa
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integrated database retrieval system
