Kryptolebias marmoratus (mangrove rivulus): 108236543
Help
Entry
108236543 CDS
T05608
Symbol
gapvd1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108236543 (gapvd1)
Membrane trafficking [BR:
kmr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
108236543 (gapvd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
108236543
NCBI-ProteinID:
XP_017272740
LinkDB
All DBs
Position
LG1:complement(12639954..12670874)
Genome browser
AA seq
1474 aa
AA seq
DB search
MVKPDIHTLAHHLKQERLYVASEKQLIQRLNNDVLKTAERLYRAAWIAKQQRINLDRLIL
TSAEASPAECCQHAKMLEDTQFIDGYKTLGFQETIYGEFLARLRENPRLVASCLVAGERL
NQEHTQGVIHNVFTSLYGNCIMQEDESYLLQVLRYLVEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLYSAKLFLTATLHEPIMQLLVEDEDHLETDPSKVTERLTPAQRERFGEKGSE
DYKTKVQAAVEANEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVERLEVGE
VRTMCTDLLLTCFICPAIVNPEQYGIISDAPINEVARFNLMQVGQLLQQLAMADDDADPR
RKSSLSKFDKGCVAAFLDVVIGGRAVETPPMSSMNLLEGLSRTAVYITHNQLLALVDFVR
SVTAGDHLREEEHMALETLLANVPQSRTVKSNSLELTPSNTPQLSPATTPANKKNRLPIG
QHLAAITSWDPTATTLSAHIPLVTPFAARSRSRTNIAQEGEAEASSQESLQELMPEEVLV
ISLGISPQTVPGMMSENEVLNLHMGDGVSGDGPADDTKLHGKPDKTLRFSLCSDNLEGIS
EGPSNRSNSVSSLDMDRESVSELGAEPSENNGAEALQLLEHEHATTQDNLDDKLRKFEIR
DMMGLTDDRDISETVSETWSTDVLGSDFDPNMDDDRLQEIAGAAAESMLGSLLCLPGSGS
VLLDPYGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGVGSTSDDTEVREVS
SRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDGEESSHGAHNLTSP
PSQAESLLAMFDPLSSGEGSSTGTIVRPKVHYPRPNHPPPDPPIPEASALGHDIRHSLFA
PHSLVQGELEHTKQRHSFPDRLVRSRSSEIVCPGRRPTSDPGLNRRVAVEERDPAGAFAL
GPSSSPCKDSLKGEVEDRKDSDDEKSDRNRPWWKKRFVSAIPKAPITAFKKRDKQEKSDA
AQERVPQDEPLPRQSNQAQAAEDILDKYRNIKRPSPSDVASAGASYDGPGDLCVEDNVND
PPREDALQNISADDLPDSASQTAQRHDSKFSFSDAKKKLRLALCSADSVALPIMAPATTR
NGLPDHMDPEDNEIVCFLKVQLAEAINLQDKNQIAQIQETTRCVSRFDARTCRKLLAAIA
EDYRKRAPYIAYLTRCRQGLQTSQAHLERLLQRVLRDKEVANRYFTTVCVRLLLEHMESK
MLDFIKAFQGCTAADDKTAAVEDFLRYLYGAMARDAIWQYASEDQLQDAQMAIERSVMNR
IFKLAFYPNQDGDILRDQLFHEHIQRLSKVVTANHKALQIPEVYLKEAPWPSAQSEIRTI
NAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIRANPPCLLSTVQY
INNFYASRLSGEECYWWMQFTAAVEFIKTIDDRK
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagccagacatccacactctggcccaccaccttaagcaggagcggctgtacgtg
gcgtcggagaaacagctgattcagaggctcaacaacgatgtgctgaagacagctgagagg
ctgtaccgggctgcctggatcgccaagcagcagaggatcaacctcgaccgcctcattctc
accagtgcggaggcctccccggctgagtgctgccaacatgccaaaatgctggaagatacg
cagtttatagatggctacaagactctgggtttccaggaaacgatctacggcgagttccta
gccaggttgagggaaaatcccaggctggtcgcgtcctgcctcgtggcaggagagagacta
aaccaggaacacacccagggggtcatccataatgtcttcacctcactttatggcaactgt
atcatgcaggaggacgagagctacctgctgcaggtgttgagataccttgtcgagtttgag
ctgaaggagagcgacaaccctcgccgccttctccgacgagggacctgtgccttcagcatc
cttttcaagctcttctccgagggcctgtactcggccaagctcttccttactgcaaccctt
catgaacccattatgcagctgctggtggaggatgaggaccacctggagacggacccatcc
aaggtgaccgagcggctcactccagcccagcgggaacgctttggagagaaaggctctgag
gactacaagaccaaagtgcaggcagctgtcgaggccaatgaagccaagctggttgctctt
gtaaacaagtttatcggctacttgaagcaaaacacctactgctttcctcacagcctgcgc
tggattgtgtcccagatgtacaagactttgtcatgcgtagaacgtctcgaggtgggtgag
gtgcgcaccatgtgcacagacctactgctgacctgcttcatttgcccagccatagtcaac
ccagagcagtatggtattatctcagacgcacccatcaacgaggtggcccgcttcaatcta
atgcaggtggggcagcttttgcagcagctggccatggctgatgatgatgcagacccaagg
cgaaaaagcagtttgtctaaatttgataagggttgtgttgctgcctttctggatgtggtg
attggaggaagagctgttgagaccccacccatgtcctccatgaaccttctcgaaggcctc
agtaggactgcagtctatattactcataatcagctgcttgcactggtggactttgttcgg
agtgtgacggcaggggaccaccttcgcgaggaggagcacatggccctggagaccctgctg
gccaatgtgccccagtctcgaaccgtgaagagcaacagcctggagctcactccctccaac
accccgcagctttctccagccaccactcccgccaacaagaagaacagactacccatagga
caacatttagctgctataacatcctgggaccccacagccaccactctgtctgctcacatt
ccattagtaaccccttttgctgctcggagccgcagccgtaccaacatagcccaggagggg
gaggcagaggccagctcccaggagtcactacaggagctgatgccagaggaggtgctcgta
atttcactaggaatcagccctcagactgtccctgggatgatgtcagagaatgaggttttg
aacttgcacatgggtgatggggtctcgggtgatggccccgctgatgatactaagctgcac
gggaaaccagacaaaaccctgcgcttctcactgtgcagcgacaacttggagggaatctca
gagggaccatccaatcgttcaaactccgtgtcctccctcgacatggatcgggagtctgtt
tctgagctgggagctgaaccctctgagaacaacggggcagaggctctgcagcttttggag
catgaacatgccaccacacaggacaacctggatgacaaactgcgcaagtttgagatcagg
gatatgatgggcctgacagatgaccgtgacatctctgagacggtcagtgaaacctggagc
accgatgtgctcggcagtgactttgacccaaatatggatgatgatcgactgcaggaaata
gcaggggcagctgcagaaagcatgctcggcagcctgctgtgtcttcctggctccggttca
gttctgctggacccctacggctccaccatctccgagaccacaagcgaagcctggagtgtg
gaggttcttcccagtgactcagaagccccagatctgaagcaggaggagcgtcttcaggag
ctggagagctgttctggggttggcagcacgtcagatgacacagaggtcagagaagtcagc
tccagacccagcacgcccggcctcagcgttgtctcaggtatcagtgcgacgtcagaagac
atccctaataagatcgaggacctgcggtcagagtgcagttcagattttggtgggaaggac
tcggtgaccagtccagatggggaggagtcgagccacggagcccacaatctgacatctcct
ccctcacaggctgagtccttactggccatgtttgatcctctctcctctggtgaaggttcc
tccactgggacaatagttcgacccaaagtgcactatcccaggcccaatcaccctccccct
gatccacctatccccgaggccagtgccctggggcacgatatacgccactctcttttcgca
ccacacagcttggtccagggtgagctggagcacacaaagcagcgtcactccttccccgac
aggctggtgcgcagccgcagctctgaaatcgtgtgccccgggcgccggcccacaagtgac
cccggcctcaacagacgggtggcagttgaagagcgcgaccctgccggggccttcgcctta
ggaccttcctcatcaccctgcaaggactctctgaaaggagaggtggaggacaggaaagac
agtgatgatgagaagtctgatcgcaacagaccatggtggaagaaacgtttcgtgtcagcc
attcccaaagctccgatcacagcttttaagaaaagggacaaacaagagaaaagcgatgca
gcccaggagcgcgtcccacaagatgagccgttgccccgacagagcaatcaagcccaggca
gctgaggacatcctggacaagtacaggaacatcaagaggcccagtccaagtgacgtagcc
tcagcgggggcctcttatgatggaccgggagatctttgtgttgaggacaacgtgaacgac
cccccgagagaagacgctctgcagaacatttctgctgatgacctgccagactcagccagc
cagacggcacagcgacatgattccaagttctctttcagtgatgctaagaagaagctgagg
ttagctttgtgttctgcagactccgtagctctccccatcatggcaccagcaaccacacgt
aacgggcttcctgatcacatggatcctgaagacaacgagattgtctgcttcctaaaggtc
cagctagcagaagccatcaaccttcaggataagaaccaaatcgcccaaatccaggagacc
acgcgctgcgtcagccgcttcgacgcgcgcacctgcaggaagctgctggctgccatagca
gaggattacagaaagcgggctccatacatagcctatctaaccaggtgtcgccagggcctg
cagacctcccaggcccacttggagaggctcttacagagggtgttgcgagacaaggaggtg
gcgaatcgctacttcaccaccgtctgtgttcgcctcctccttgaacatatggagtcaaag
atgctcgacttcattaaagcgttccaggggtgcacagcagctgatgacaagacagcagcg
gtggaggattttctgcgctacttgtacggcgccatggcccgtgatgccatttggcagtat
gcaagcgaagaccagctgcaggatgcccagatggctatcgaacgcagcgttatgaaccgc
atcttcaagctggctttctaccccaatcaggatggagatattctcagagaccagcttttc
catgaacacatccagcggctctcaaaagttgttacagcgaatcacaaagctcttcaaata
ccagaggtctacctaaaagaagctccctggccctctgctcagtccgagattcggaccatc
aatgcatacaagacaccccgggacaaagtccagtgtattctgcgcatgtgctccaccatc
atgaatctcctcagtttagccaatgaagactctgtgccaggagcagatgactttgtcccc
gttctggtctttgtcctcatcagggcaaacccgccctgcctgctgtccaccgttcagtac
atcaataatttctacgccagccgtctgagtggggaggagtgctattggtggatgcagttc
accgcggcggtggaattcattaagaccatcgacgatcgcaagtga
DBGET
integrated database retrieval system
