Kryptolebias marmoratus (mangrove rivulus): 108236551
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Entry
108236551 CDS
T05608
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X3
KO
K24936
tetratricopeptide repeat protein 28
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108236551 (ttc28)
Cilium and associated proteins [BR:
kmr03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
108236551 (ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_16
TPR_SusR
RPN7
TPR_11
TPR_17
TPR_14
DUF6340
TPR_BSK1_C
TPR_9
TPR_NPHP3
TPR_19
TPR_6
PUB
CFAP70_mid_TPR
BTAD
TPR_YpiA_C
HlyE
AP4E_app_platf
ARM_TT21_5th
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
108236551
NCBI-ProteinID:
XP_017272768
LinkDB
All DBs
Position
LG1:13510432..13699867
Genome browser
AA seq
2475 aa
AA seq
DB search
MEKQATLKEKTSVFGSRAAGRPIRCVAGDDRTRYALSKVEFMEKVQQSNEACQRGDFQEA
VRLYSEALRADPQNCILYSNRSAARLKLGQHQAALEDAERACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRDSLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRSYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPELQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFAKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVAGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVSGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLAIARDTQDRLLEGDASCGLGAVYQSMGEYETALRCHQSDLEIAEESGSTTRQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDADPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVSEGGSDFQ
EGGGSGMVSSSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNLGKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIH
GLGTNAKAHSRRPGPAPSGGVSMAAVVGNPKLPSPVMDRWLWGPMPTAEEEALMVAELLG
CQPLTCSSATKERVMSALTQAECAHFATHISWKLAALVLTPNPEGVTGGAGASVGVGTMG
RGAGGRRGSSGRGRKGSTGSGYTIPESLHMQDDSSDVESICDSPPLQEFLLTAADILDLR
LPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASKVFVHAFYSA
LLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYP
DRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSA
GTGIPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLINRAVKN
MVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVV
LKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPIPTGYSSL
PFSPPYLDNQASDAISVYSLSSVTSSMSFASKSDCDFLGHRQRGGATAHFSVHKHPHVPR
SRSSPHGAAAVGSGARGDEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVGGS
TGAGRGYTVSVSSRGSVSTPTSPVKTSLVPSPNSPFQKVGKVSSSDTGESDQSSTETDST
VKSQEEKTVNLDPQELAQKILEETHSHLRAVSSLQRAGAEGGTGAATTARSSTFRSSETS
AFSRPNSSASGRAQSSPRPKPPSRSSSLQKISSGYNSPAVSESSQKEGSHPSPTLDSHAQ
FKLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSTSADVPDLDRL
RRGVIDEKVQAIHNLKTFWANAAAQQQHHLGPVRAIHGTPGPIASAGRDVLSLLNLSPRH
CSPNDGQDSLELRELGLDSSSKNSSNGHHCSNPRKVAPSPTISTSSSPGARSIRLPAGNG
YKFLSPGRFFPSSKC
NT seq
7428 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaagcgactctgaaagaaaagacctcagtcttcggctcccgggcggcgggc
cgacctatccggtgcgttgccggggacgacaggacgcggtatgccctcagcaaagtggag
ttcatggagaaggtacagcagagcaacgaggcgtgccagcggggcgacttccaggaggcc
gtgcgcctgtacagcgaggcgctgcgggccgacccgcagaactgcatcctgtacagcaac
cgctcagcggcccgcctcaaactgggccagcaccaggctgcgctggaggacgcggagcgg
gcttgtgagctcaacccgaagtggccgaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcactggccgcctttgcctccgggctggcccaagacccc
aagagcctgcagctacttgtgggcatggtcgaagctgctatgaagtcaccattacgagat
tctctggagcccacctatcagcagctgcaaaagatgaaactggacaaaagtccatttgtg
gtggtgtctgtgattggccaggagctgctgacagcaggccaccacacagcctctgttgtg
gtgctcgaagccgctttgaagattgggacttgcagcctgaagctacgcggctccgtcttc
tcggccctcagcagcgctcactggtccctgggcaacacagagaagagcacagggtacatg
cagcaagacttagaggtggccaaaaccttaggtgaccaaaccggggaatgccgggctcat
gggaatctgggctctgcattcttctccaaggggaactaccgtgaagcattgactaaccac
cgcaaccagctggttctggccatgaagttaaaggacagagaggctgcttcaatggcgctg
agcagcctgggccatgtatatacagccattggggactatccgaacgccctcgccagccac
aagcagtgtgtcctcctggccaagcagtccaaggatcagctctctgaggctcgagagcta
ggaaacatgggggcagtctacatcgccatgggagactttgataatgctgttcagtgtcat
gaacaacatttaggcatagccaaagccctggaaaataaacgagaggaagctcgggcatac
agcaatttaggcagtgcctaccactaccatcgtaattttgacaaggctatgtcctaccat
actcatgttctggagcttgcccaggagctggaagaaaaatccattgagatgagagcttac
gcagggctgggacatgctgcccgctgcatgcaagacttggagagggccaagcagtaccac
gaacagcagctgtctattgctgaaggactgaaggacagggctgccgagggaagggcctcc
tccaatttaggcattatccaccagatgaagggggactatgagactgcactgaaactccac
aaaacacacctggccattgctcaggagctgaacgactatgctgcccagggtcggtcttat
ggtaacatgggtaatgcctacaatgcccttggagcctttgaccaagctgttcgctaccac
cgccaggaactgcaaatctccatggaggtcaatgacagggcttcacaggcctccactcat
ggcaacctggctgtagcttaccaagctcttggtgcccatgaccgagctctacagcattac
cagaaccacctcaacatagctcgggagctcagagatgtacagagtgaagcacgggctctg
ggaaacttgggcaacttccactgctctcgaggagagtttcctcaagctgtgccctactat
gagcagtacctcagactgtcccctgaactccaagacatggagagtgaaggtaaagtttgc
cacaatctgggttatgcccactactgcttgggtaactaccaggatgctgtcaaatactac
gagcaggatctagctctggccaaggacctccatgacaaactgagtcaggccaaggcatat
tgcaaccttggtttggctttcaaggcccttggagattttgctaaggcagaggagtgccag
aagtatttgctgtcattggcccagtccctgaacaatgcacaggctcgcttcagagctctg
gggaacttaggggacatatttgtctgtaaaaaagatgtagctggagccattcagttttat
gagcagcaactggccttagctcaccaggttaaggagcgtaggatggaagcctgtgcttat
gctgctctcggagccacctacagacttgtgcagaaatatgacaaagccctcggctaccac
acccaagagctagaggtataccaagaacttggcgatgtgtcaggagagtgcaaagcccat
ggccacttggcagctgtctatatggcccttggaaaatatgccatggctttcaagagctat
gaggagcagctagaactaggtcggaggttgaaggatcctgttgtggaggctcaagtttat
ggaaatatgggcatcacaaaaatgaatgttggagtgatggaggaggctattggctacctg
gagcagcagctggctactctgcagcagctgagtggaaatgaagcagtaatggaccggggc
agggcatatggaaacctgggagactgctatgaagctcttggagattttgaggaagccatc
aagtactatgaccaatatttatcagtggcacaaagtctaaatcgcatgcaagaccaagag
aaggcctacagaggcctaggcaatggacacagggccatgggaaaccttcagcagtcgctg
gtgtgttttgaaaagcggcttgttgttgcacatgagctaggtgagtgtggaggcaaggct
caggcctatggtgagcttggtgcgctccacagccaattaggtaattacgagcaggccatt
tcctgcctggagcgtcaactggccatcgcccgtgacacccaggacagactactggagggc
gacgccagctgtggcttgggagctgtgtatcagtctatgggagagtacgagacggccctg
cgatgccaccaaagtgacctggagatcgcagaagaatcaggcagcaccacacgccaggct
cgagcttatgggaatctgggtcttacctacgagtcacttggaaactacgagcgagcggtt
gtgtttcaagaacagcacctgagtgtggcggctcagactaatgacttggctgccaagaca
ctggcctatggcagcctggggagaacacaccatgctctgcagaactactcacaagctgtc
atgtacctgcaggaaggcctgcggcttgcagagcagctggctcggcgtgaggacgaggcg
aagatccgccatcgtctggggctctccctgtgggccagcgggaatctggaggaggcccaa
catcagctttaccgggcgtctgcgctgttcgagactatccgccatgaagcccagcacagc
acagactacaaactctctctgtttgacctccaaacctcctgctaccaggctctccaaagg
gtcctcgtcagcctcggccaccacgatgaagccctggcggtggcagaacgaggtcgcaca
cgagcctttgccgatctcttggtggagaggcagacgggtcagcaggacgcagacccctac
actccagtcacagtggagcacatcttggacaccgtcaacagccagagggcattagtgttg
tatttctcaatggcagcaggctacctgtacagctggctgctggctccaggggcaggaatc
ctgaagtttcatgaagtttacctgggcgagggcgtgtcagaaggaggctcggacttccag
gaaggaggaggaagtggaatggtcagcagctcctcactggagcagcacattgccagcgct
cgtgaggctctgggagtagagtcctattacagcagagggtgttcgagcagcgagacagag
agcgaggcaggagatttgttggaccagcaatttgaggaacttaacaacaagcttaactca
gtcacagatccaacgggcttcctgcgcatggtgtcaagaaacaacctgttcaacaggagt
tgccagagtatgaccagcctgtttagtaacactatgtctccagccaaagatggtaactct
tccctgcctcgtcgctctagcaaccttggcaaacctccgcttcgggcactgtatgattta
ctcattgcacctatggaggggggcctgatgcactccagcgggcctgttggcagacacaga
caattggtgatggtgctggaaggagagctgtacctcatcccctttgccctgctaaaagga
agctcttccaatgaatacctttatgagcgtttcagcctcattgctgtgccctccatccat
ggccttggaaccaatgccaaggctcactctcggcgtcctggaccagctccaagtggtgga
gtctcaatggcagcagtggtaggaaatccgaaactgccttcacctgtgatggatcgatgg
ctttggggtccgatgcccacagcagaggaggaggccctaatggttgctgagctgctcgga
tgccagcctctgacctgctcttctgccaccaaggagagggtgatgagtgccctgacacaa
gctgaatgtgcgcactttgccacccacatttcctggaaactagcagctctggtgctcact
ccaaaccccgagggtgtcaccggaggagcaggggccagtgtgggcgtcggaacgatgggc
agaggtgcaggtggaaggcgaggcagcagtggtcgaggcaggaagggctccactgggagt
ggctacactatcccagagtctctccacatgcaggatgacagcagtgatgtggagagcatc
tgtgacagcccacctcttcaggagttcctgctcacagctgcagatatattggacctgagg
ctgcctgttaagctggtggtgctggggtcataccaagagtccagcagcaaggtcacagca
gacggtgttgtggggctaaccagagccttcctggctgctggcgctcagtgtgttctcgtg
tccttgtggcctgtacccgttgcagcctctaaggtttttgtccacgctttctactctgcc
ctgctcaatgggaccaaggctagtgcagccctagccgatgccatgaaaactgtccagagc
agcaaacaatactcccacccatccaactgggcaggatacatgctgattggcaacgatgtg
aagctgaacagcccgtcctctctgattggccaagccttggctgagattctgcagtatcca
gatcgagctcgtgatgcactgagggttttacttcacctggtggagaagtctcttcagagg
atccagaatggacagcgtaattcgatgtacacgtcccagcagagtgtggagaacaaggtg
gggggtgtccctggctggcaggccctgctgacagctgtgggcttccgcctcgactctgca
ggcaccggtattcctgctgctgtcttctttcccactgctgaccctggagacaggctccag
caatgcagtaccactttacaatcactgttaggtctgccaccaccagctctccaagctttg
tgcaaactcatcacagcttcagaagcaggagagcagctcatcaaccgggctgttaaaaat
atggtggccatgctacaccaggtgctagttcaactccagacaggagagaaagaacaggat
ttttccctcctacccattcaggtgtccatcagtgtgcagctatggagactgccaggatgc
catgagtttctggctgctcttggatttgacctatgtgaggtaggccaagaagaagtggtg
ctgaagacaggcaagctggccaaccgacgcactttacactttgccctccagtctctgctg
gcgctgtttgactccacagaactgcccaagcgcctgagtctagacagctcatcttccctt
gagtctttagcctcagcccagtccgtgtctaacccaatacccacagggtactcaagcctt
ccattttctcctccttacttggacaatcaagcatcagatgctatctctgtctacagcctc
agctctgtaacttcatccatgagctttgcctccaagtcagattgtgattttcttggtcat
cggcaacgaggtggtgccacagcacacttttctgttcacaaacaccctcatgttccccgt
agtcgctcgtctcctcatggggcagctgctgtggggtccggagcacggggcgatgaagag
gaatacgagggcttttccattatcagcagcgagccactgggaagtcactgtgactctctg
cctttgccaccaggccacagccagcgacatcatcgtggaggtagaggggttggtgggtcc
accggagcagggagaggctacactgtctcagtttcatcaagaggcagtgtcagcaccccc
acatcaccagtcaaaacatctctggtacccagcccgaactcaccatttcagaaggtgggt
aaggtgagcagttcggatacaggtgaatctgaccagtccagtactgagacagacagtact
gtcaagtctcaggaagaaaaaactgtcaatctcgatccccaagagctggcccagaaaatt
ctggaggagactcacagccatttacgtgctgtaagcagtctccagcgggccggagcagag
ggtggaacaggtgccgcaaccacagctcgaagcagcacattccgctcctctgaaaccagc
gcattcagccgtcctaacagcagcgctagtggccgagctcagtcttccccgagacccaaa
cctccctctcgttcatcttccctgcagaagataagctctggatacaatagtcctgcagtc
tctgagtcttcccaaaaggagggcagccatccttcacccactttggacagccatgcacag
tttaaattgaagtacccaagctctccttacagtggccacatttctcgttccccaagtaat
gtgtctcccagttctggtcaccagtcaccagctggtagtgctccatctcctgctctgtcc
tactcctccacaggctctgcatgttctacatcagctgatgtgccagatctggacaggctg
agaagaggggtcattgatgaaaaagtccaagctatccacaatctgaagaccttttgggcc
aacgctgcagctcagcaacagcatcatctaggtcctgtcagagccatccacggcactcct
ggacctattgcttctgctggcagagatgtactgagccttctaaacttgtccccacggcac
tgctcccctaatgatggccaagacagcctggagctgcgggagctgggactggatagcagt
agcaagaactcttccaatggtcaccactgttccaaccctagaaaagttgccccatcgcct
actatttccacaagcagtagccctggtgctcgttcaattcgactacctgctggcaatgga
tacaaattcctgtcacctggaagattttttccctcttctaaatgctga
DBGET
integrated database retrieval system
