Kryptolebias marmoratus (mangrove rivulus): 108236606
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Entry
108236606 CDS
T05608
Symbol
atl1
Name
(RefSeq) atlastin-1 isoform X2
KO
K17339
atlastin [EC:3.6.5.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
kmr04131
]
108236606 (atl1)
Membrane trafficking [BR:
kmr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
108236606 (atl1)
Autophagy
ER-phagy
ER-phagy recepters
108236606 (atl1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
FA_desaturase
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
108236606
NCBI-ProteinID:
XP_017272871
UniProt:
A0A3Q3GI52
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Position
LG10:complement(6049786..6068477)
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AA seq
560 aa
AA seq
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MAKHRPDRDSWGSLSDKNVYDWSSEDEEPDGRARPVQVLLVKDDHTFELAEAALSRILLA
EKVRDREVVAISVAGAFRKGKSFLMDFMLRYMYNHASEDWLGDANEPLTGFSWRGGSERE
TTGIQIWSEVFLVDKPDGRKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSMQVYNIS
QNIQEDDLQHLQLFTEYGRLAMEETFLKPFQSMIFLVRDWSFPYEFPYGQEGGMKFLEKR
LKISENQHEELQNVRKHIHSCFTNISCFLMPHPGLKVATNPHFDGRLKEIDGEFTNNLKV
LVPWLLSPRNIDVKEINGSKITCRGLVEYFKAYIKIYQGEELPHPKSMLQATAEANNLAA
VAAAKDLYNKKMEEVCGGDRPFLAPSELQARHGAIREEALQLFRGVKKMGGEEFSRRYLQ
QLESEVDEVFVQYIKHNDSKNIFHAARTPATLFVVIFVMYVAAGITGFVGVDIIASLCNM
ILGLALITLCTWAYIRYSGEYRELGAVIDQVAGALWDQGSTNEALYKLYNVAANHRHLYH
HAFPGPQVDEAAEERDKKRD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacaccgtccagatagagacagctgggggtctctcagcgacaaaaacgtctac
gactggagctcggaggacgaggagccggacggacgggcccggcctgtccaggtgctgctg
gtcaaggacgaccacaccttcgagctggccgaggcggccctgagccggatcctgctggcg
gagaaggtccgggaccgagaggtggtggccatctccgtggcgggggcgttccgcaagggc
aagtccttcctgatggacttcatgctgcggtacatgtacaaccacgcgtccgaggactgg
ctcggagacgccaacgagcctctgactggcttctcctggagagggggctcggagagggag
accacggggatccagatctggagcgaggtctttctggtggacaaaccggacggcagaaag
gtcgccgtgttgctgatggacactcagggaacgtttgacagccagtccacgctgagggac
tcggccaccgtgttcgctctgagcaccatgatcagctccatgcaggtttataacatttca
cagaatatacaagaggatgatcttcagcacctacagcttttcactgagtatggaagacta
gcaatggaagagactttcctcaagccgtttcagtccatgattttcctggttcgggattgg
agttttccgtacgagtttccctacggacaagaaggcggcatgaagttcctcgagaagaga
ctgaagatctccgaaaatcagcacgaagagctgcagaacgtccgtaaacacatccactcc
tgcttcaccaacatctcctgcttcctgatgccccaccccggacttaaagtggccaccaac
ccacacttcgatggaagacttaaagaaattgacggcgagttcacgaacaacctgaaggtt
ctggtcccctggctgctcagtcctcgtaacatcgacgtgaaggagatcaacggcagcaag
atcacctgccgaggcctggtggagtactttaaggcatacatcaaaatttaccaaggtgag
gagctgccacatccaaaatcaatgctgcaggccacagcagaggccaataatttagcggcc
gtcgcagcagcgaaggatctgtacaacaaaaagatggaggaggtctgcggaggggatcgg
cccttcctggcccccagcgagctgcaggcccggcacggcgccatcagagaagaagccctg
cagctgtttcggggcgtgaagaagatgggaggcgaggagttcagccggcgctacctgcag
cagctggaaagcgaggtcgacgaggtgttcgtccagtacatcaagcacaatgactccaag
aacattttccatgcggcccgcacacccgccacgctcttcgtggtcatcttcgtcatgtac
gtggccgcggggatcacgggcttcgtgggcgtggacatcattgccagcttgtgtaacatg
atcctgggcctggcgctgatcaccctctgcacctgggcttatatccgctactccggggag
tacagagaactcggcgccgtcatcgatcaggtggccggtgcgctgtgggaccaggggagc
acaaatgaggctctctacaagctgtacaacgtagcggccaatcacaggcacctgtaccac
cacgcgttccccgggcctcaggtggacgaggcggctgaggagcgggacaagaagagagac
tga
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