Kryptolebias marmoratus (mangrove rivulus): 108236617
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Entry
108236617 CDS
T05608
Symbol
spata5
Name
(RefSeq) ATPase family protein 2 homolog isoform X1
KO
K14575
AAA family ATPase
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108236617 (spata5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108236617 (spata5)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108236617 (spata5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_28
nSTAND3
RNA_helicase
Mg_chelatase
AAA_14
Parvo_NS1
NPHP3_N
AAA_7
IstB_IS21
AAA_25
Rad17
AAA_3
AAA_17
AAA_18
ATPase
Sigma54_activat
NACHT
TsaE
bpMoxR
DUF815
ABC_tran
AAA_24
Zeta_toxin
AAA_19
DUF5906
CDC48_N
SLFN-g3_helicase
AAA_6
Motif
Other DBs
NCBI-GeneID:
108236617
NCBI-ProteinID:
XP_017272891
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Position
LG9:27398301..27515236
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AA seq
885 aa
AA seq
DB search
MSSKKNKNKSKRTSEGDSSGVLKEAPRDSSNPQTSTGSCKTSDSCSSFTVFDFIEKADDK
TPRSCRSSLAQMSLNSMKSAGVCIARPVLLTGPSGRQEVCSGWPVASFPGGRVGLQKSAQ
NNLRVKSGDSVTLRPVTGPVIQAEEVVLSNRSKDEKIETDDFKNFFLKTLAGNIILPGNL
VSLSYFGRSCSLRVETVRGEDGVTLQRPSPPPGAVPDAEESSVLDSTSADLSQQLGTLTV
EDNQFDPAAPGASGEPGPAASTPRRSAPLPSLSSPAAPFTPTSVCPEGSLSPEQVENPST
APPAGFLSTDTFYSLSCSTKVTFRSREGLKGPEEEAQRSKVTYSMIGGLSSQLDIIRETI
ELPLKRPELFSNYGIPPPRGVLLYGPPGTGKTMIARAIANEVGAHMVVINGPEIMSKFYG
ETEGRLRQIFTEASQRQPAIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGH
SGQLLVLGATNRPQALDPALRRPGRFDKELEVGVPSSAERADILQKQLSSVPCGATEQEL
TQLADGAHGYVGADLAAVCKEAGLHALRRALGASNQASDQQLMGTVIITLQDLQWAMTAV
KPSAMREVAIDVPKVLWSDVGGMAEVKLKLKQAVEWPLRHPEAFTRMGIQPPKGVLLYGP
PGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVREVFRKARAVAPSIVFFDEI
DALASERGSSSGSGGVGDRVLAQLLTEMDGIEQLRGVTVLAATNRPDMIDKALMRPGRLD
RIVYVPLPDAATRLEIFSLQLRNMPVAEDVSLHDLVTRTDKYSGAEITAVCREAALLALQ
EDIKAQHIQAGHFQRALEAVRPRIPDSLVRSYLSYQQQHSGLGFF
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcaaagaagaacaagaacaaatccaaaagaacgagtgaaggagacagctcgggt
gtgttgaaggaagctccgagggactcctcgaacccgcaaacatcgaccggaagctgcaaa
acttccgacagctgcagctcattcactgtcttcgacttcatagaaaaagctgatgacaaa
acgccccgaagctgcaggtcgtctttagcccagatgagtctgaactcaatgaagtcggcc
ggcgtttgcatcgcgagacccgtcctgctgacgggtccgtcgggacgtcaggaggtgtgt
tcgggttggcccgtggcctcctttccaggtggacgggtcggccttcagaaatctgctcag
aacaacctgagggttaaatccggggactcggtgaccctgcgccccgtaactggacccgtg
atccaggccgaagaggtggttctttctaaccggtcaaaagatgagaaaatagaaacggat
gattttaagaacttctttctgaaaactttggctggaaacataattttgcctggaaatctc
gtctctttgagttattttggccgctcctgcagtctccgtgtcgagaccgtaaggggggag
gacggagtcaccctccagagaccgtctcctcccccgggagcggtccctgatgcagaggag
tcctccgtcctggactccacatcagctgacctctcccagcagctcggcacgctcaccgtg
gaggacaaccagttcgacccggcagcaccaggcgcgtccggagagcccggtcctgccgcc
agcaccccccgccgatcggcccctctcccctctctctcctcacctgccgctcccttcaca
ccgacctccgtctgtccagagggctcgctgagcccagagcaggtggagaacccgtccacg
gcgccccctgctggttttctcagcaccgacaccttctactctctgtcgtgctccaccaaa
gtcacgttcagaagcagagaagggctgaaaggcccagaggaagaagctcagaggtcgaag
gtcacatacagcatgatcggtggtcttagcagccagttggacatcatcagagagaccatc
gagcttcctctgaaacgccccgagctgttttctaactacggaatcccgcctccgaggggg
gtgctgctatacggacccccgggaacaggaaaaaccatgatcgcacgagccatagccaac
gaggtcggggctcacatggtggtgatcaacggcccagagatcatgagcaagttttacggt
gaaacggaaggacggctgaggcaaatattcaccgaggcgtctcagaggcagcctgcgatc
atcttcatcgatgagctcgacgctctgtgcccgaagcgagaaggcgctcagaacgaggtg
gagaaacgagtcgtcgcttctctcctgaccctgatggacgggatcggttcagagggccac
tcaggtcagctgttagtcctgggggccacgaacagaccccaggccctggaccctgccctg
cggaggccgggacgcttcgacaaggagctggaggtgggggttcccagcagtgccgagcgg
gcggacattttgcagaagcagctgagttccgtcccgtgcggcgccaccgagcaggagctg
acgcagctggcggacggcgctcacggatacgtgggagcagatctggcagctgtttgtaaa
gaagccggtctgcatgcactgaggcgagcactgggagcttccaaccaagcgtcagatcag
cagctgatggggactgtaatcatcactctgcaggacctgcaatgggccatgacggctgtg
aaacccagtgccatgagagaggttgcgattgacgtccccaaggtgctctggtcagatgtt
ggtggcatggcggaggtgaagctgaagctgaagcaggccgtggagtggcctctgaggcac
cccgaggccttcacccggatgggcatccagcccccgaaaggagtcctcctctatgggccc
ccaggctgctccaaaaccatgatagccaaggctctggctaatgaaagcgggctcaacttt
ctggctattaaagggccagaattactgagcaagtacgtcggtgagtctgaaagagccgtc
agagaggtgtttcggaaggcgagggcggtcgccccctccatcgtcttcttcgacgagatc
gatgctctggccagcgaaagaggaagctcctcgggttccggcggcgtgggcgaccgggtc
ctggctcagctcctgacagagatggacggcatcgagcagctccgaggtgtgaccgtgctc
gccgccaccaaccggcccgacatgatcgataaggctctgatgcgtccgggccgcctcgac
cggatcgtctacgtgccgctcccggatgctgcgactcggctcgagatattctctctccag
ttacgaaacatgcccgtggcagaggacgtgtccctccacgacctggtgacccggaccgac
aagtactcaggagcggagataacggcagtatgcagagaggcggccctcctggccctgcag
gaggacatcaaagctcagcacatccaggcgggacactttcaacgggccctggaagccgtg
aggccccggatccccgactcgctcgtccgctcatacctcagctatcagcagcagcacagc
ggcctgggcttcttctga
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