Kryptolebias marmoratus (mangrove rivulus): 108236684
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Entry
108236684 CDS
T05608
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
kmr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108236684 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108236684 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108236684 (srsf5a)
Spliceosome [BR:
kmr03041
]
Common components
Common spliceosomal components
SR proteins
108236684 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
108236684
NCBI-ProteinID:
XP_017273028
UniProt:
A0A3Q3G7L6
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All DBs
Position
LG10:complement(7473074..7480860)
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AA seq
324 aa
AA seq
DB search
MSGSRVFIGRLNPQARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGGGGGGGGGGPGPGMGRFGGGYRRNNARYGPPVRTDHRLI
VENLSSRISWQDLKDLMRKAGEVTFVDAHRPTQNEGVVEFASRHDLKNAISKLNGTELNG
RRLKLYEDSKRSRSRSYSRSRSRSRSRSRSRSSSRSLSRTPEKKKTSGGGKPSDRSPSRS
KSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSRSPSPAPAENKESGSR
PRSRSRSRSRSRSRSRSASADSKH
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcagccgtgtttttattggccgcctgaacccgcaggccagagaaagagacgtg
gaaaagtttttcaagggatacggacggattcgagagatcaacttgaagaatggatttgga
tttgtggagtttgatgaccacagagatgcagatgatgccgtgtatgagctgaatgggaag
gaattgtgcagtgaaagggtcaccattgagcatgctcgctccagaagaggaaggggagga
ggaggagggggtggtggtggtggtggaggccccggccctggaatgggacgttttggaggc
ggctacaggcgcaacaatgccaggtatggccctcctgtgcgaaccgaccacagacttatt
gtggagaacctctcatcgcggatcagctggcaggacctgaaagacctgatgagaaaagca
ggtgaagttacctttgtggacgcacacagacccactcaaaatgaaggggtggttgagttt
gcttcgcgccatgacctgaagaacgccatctccaagcttaatggaaccgaactgaacgga
cgtagactgaagctctacgaggacagcaagaggagtcgctcccgcagctattcccgttcc
aggagccgctccaggagccgcagtcgctccagaagcagctccaggtccctgagccgcacc
ccagagaagaagaagacatcgggagggggcaagccctcagacagatccccgtccaggtcc
aagtctcgctccaagtctcgctccaagtcgcgttccaagtctcgttccaagtctcgttcc
aagtctcgttctaaatcccgctccaaatctcgttccaagtctcgctccaaatcccgctca
aagtctcgctcgcgttccccttctcctgctcccgctgaaaacaaagagtctggttccaga
ccccgatcccgctcccgttccagatccagatcccgctcccgttctcgctccgcctcagct
gacagtaaacactga
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