Kryptolebias marmoratus (mangrove rivulus): 108236775
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Entry
108236775 CDS
T05608
Symbol
cacna1db
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04020
Calcium signaling pathway
kmr04218
Cellular senescence
kmr04260
Cardiac muscle contraction
kmr04261
Adrenergic signaling in cardiomyocytes
kmr04270
Vascular smooth muscle contraction
kmr04530
Tight junction
kmr04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108236775 (cacna1db)
04020 Calcium signaling pathway
108236775 (cacna1db)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
108236775 (cacna1db)
09144 Cellular community - eukaryotes
04530 Tight junction
108236775 (cacna1db)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108236775 (cacna1db)
09153 Circulatory system
04260 Cardiac muscle contraction
108236775 (cacna1db)
04261 Adrenergic signaling in cardiomyocytes
108236775 (cacna1db)
04270 Vascular smooth muscle contraction
108236775 (cacna1db)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108236775 (cacna1db)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108236775 (cacna1db)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
CAC1F_C
PKD_channel
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
108236775
NCBI-ProteinID:
XP_037832704
LinkDB
All DBs
Position
LG8:22079744..22146402
Genome browser
AA seq
2248 aa
AA seq
DB search
MPFIIRGRALRGAQYASNRRTTPSTDTPALWPESHTSLLQLPSSEPVQAPASTGKPVGSS
HGLLGANTATQGQGGTGSGVSPVLAWHAAITAARQAQDDAEMPNMSSRPSLCNAGAAPVG
SLAQRKRQQYAKSKKQGGSTSSRPPRALFCLTLNNPIRRACISLVEWKPFDIFILLSIFA
NCVALAIYIPFPGDDSNSTNQELETVEYAFLIIFTIETFLKIIAYGLVMHQNSYVRNGWN
MLDFVIVIVGLFSVVLEMITKDADSGGQSGGKPGGFDVKALRAFRVLRPLRLVSGVPSLQ
VVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCFVIKTGALVEEEPAPCA
VSGHGRRCLLNGTVCREGWQGPNNGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAMG
FELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGY
LDWITQAEDIDPENEEEGDEESKRNRVTLADLTQKKKGKFGWFSQSTETQASMPTSETES
VNTDNHNGEDDKSPCCGPLCQKITKSKCSRQWRRWNRFCRRKCRAAVKSVIFYWLVIILV
FLNTLTIASEHYNQPDWLTEVQDVANKVLLALFTLEMLVKMYSLGLQAYFVSLFNRFDCF
VVCGGIVETILVEFSIMSPLGISVLRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASL
LLLLFLFIIIFSLLGMQLFGGKFNFDETVTKRSTFDNFPQALLTVFQILTGEDWNTVMYD
GIMAYGGPASSGMVVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNSAQKEEEEAKK
RKNSAKDINPDKKVEITEDKDGETKVPTEALLQEDKESHSATESPGDDDDDDDDNGNLSD
VPLGPRPQRLSELTLKEKTPPIPEGSAFFIFSSTNPFRVFCHKLINHQIFTNLILVFIML
SSVSLAAEDPIRNFSARNIILGYFDYAFTAIFTVEILLKILSYADYVFTSMFTFEILIKM
TAFGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRA
KGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDDAKSSPDECKGT
YILYNNGDTALPMVKERIWHNSDFNFDNVLMAMMALFTVSTFEGWPTLLYKAIDSNRENM
GPIYNYRIEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEY
ALKARPLRRYIPKNPYQYKFWYVVNSTGFEYVMFVLIILNTLCLAIQHHGQSHLFNYAMD
ILNMVFTGVFTVEMILKLIAFKPRNYFADAWNTFDALIVVGSVVDIAITEINNTEDSARI
SITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFG
KIAMVDGTQINRNNNFQTFPQAVLMLFRCATGEAWQEIMLACLPGKLCDSESDYNPGEER
TCGSGFAIIYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYD
PEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFAL
VRTALKIKTEGNLEQANEELRAVIKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQ
DYFRKFKRRKEQGLVGRRSWERLNTTLALQAGLRTLHDIGPEICRAISCDLQEEGLVDGT
GEEEEEIYRRNGGLFGNHVNHGDQQGSSHLTTVTQRPLQILPFYGTPSIAPTQTVTRASS
SDKEGETEMNSSPIQYNHHPSPHLYDYPHCNSTCHQSPIPSNANLNNANVPSLLSMTSGR
QQKCLLQRCRPSSTRIGSSTTYSRGLHNKPWKSHSTRTRYYEAYIRSKNGGGLYPTICRE
QPGGGDSDDERGSGEYFSGEEFHEDDIMLTKERLSRTNFHHDSDEDFDLSREDCQPDSYY
DNDKQPICQDGRWSPRRWFLPSPQASHTPTFSFECLRRRSSSDDPPLSPLCTALPLQLMQ
QQVMAVAGLDASRIQRLSPTRSLRSWATPPASPISCDCSTSYTPLIQVDWRSSGSVGSIP
GAMKRSSWYTDGQDGCPSRSHSPSRLQLPTESCSHFQQKRRSANSLVEAILISEGLGKYA
RDPKFVSATKHEIADACEMTIDEMESAASNLLNGSMGNGSTGGTADVGSDSHPITHLRDH
RDYSDEEPYVAVKCEEDLTDEMICITSL
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttattatcaggggaagagccctgaggggggcacagtatgccagcaacagaagg
accactccctccactgacaccccggcgctctggccagagagccacaccagtctgctccag
cttccctcatcagagcccgttcaggctccagccagcaccggaaagcccgtcggctcctct
catgggctccttggggccaacactgctactcagggccagggtggcactggttccggcgtc
agcccggtacttgcttggcatgccgccatcacggcggctcgacaagcgcaggacgatgct
gaaatgcccaacatgagttcacggccctcgctctgcaacgctggagcggctcccgttggc
tccctggcacagaggaagaggcagcagtacgctaaaagcaaaaagcaaggaggatcgacc
agcagccggccgcccagagctctgttctgcctcaccctcaacaacccaatccgcagggcc
tgcatcagcctggtggaatggaaaccgtttgatatctttatactgctgtctatttttgcc
aactgtgtggccttagccatctacatcccctttcctggagacgactccaactctaccaac
caagaactggaaacagtagaatatgccttcctgatcatttttacaatagaaacatttctg
aagattattgcctatggcttggtcatgcaccaaaactcctacgtcagaaacgggtggaac
atgttggacttcgtcatcgtcatagtggggttgtttagtgttgttctggagatgataacc
aaagatgctgactctgggggccagtctggaggcaaaccaggggggtttgatgtaaaggcc
ctcagagcctttcgtgtcctgcggccacttcgccttgtttctggagttcccagtttacag
gtggttttaaattcaattattaaagccatggttcctctgcttcacatcgccctgttggtc
ctttttgtaattattatctacgccatcatcggcctggagcttttcatcggaaagatgcat
gccacatgcttcgtaataaaaacaggtgcccttgtagaagaagagcctgctccctgtgca
gtatcgggacacggccgccgctgcctcctcaacggcacggtttgcagagaaggctggcaa
ggtcccaataatggcatcaccaacttcgacaattttctgtttgccatgctcactgtgttc
cagtgtatcaccatggagggctggaccgatgtgctctactggatgaatgatgcgatgggc
ttcgagctgccatgggtttactttgtcagtctggtcatctttggatccttctttgttctt
aatttagttttgggtgtgttgagcggagagttttccaaagagcgagagaaagccaaggct
cggggtgatttccagaagctgcgcgagaagcagcagctagaagaagacctgaagggctac
ctggactggatcacacaagctgaggacatcgaccctgagaacgaggaggagggagatgag
gagagcaaacgcaaccgggtcacgctggctgacctcactcagaagaagaaaggaaagttt
ggctggttctctcagtccacagagacacaggcgagcatgcctacaagtgagacagaatca
gtgaacacagacaatcacaacggagaggacgacaaatcaccgtgctgcgggccgctgtgt
caaaaaataactaagtcaaagtgcagtcgtcagtggcgacgatggaaccgattctgccgc
aggaagtgccgtgcagccgtaaaatcagtgatcttttattggcttgtcatcatcttggtg
ttcctcaacactcttaccatcgcctctgagcactacaaccagccagactggctgactgaa
gtgcaggatgtagccaacaaagttctgctggctctgttcactctggagatgcttgtgaag
atgtacagtttggggttacaggcatactttgtgtccctgtttaaccgctttgactgtttt
gtggtgtgtggaggcatcgtagaaaccatcctggtggagttttccatcatgtcccctctg
ggaatctctgtcttacgctgcgtacgcctcctcagaattttcaaagtcacacgtcactgg
gcatctcttagtaacctggtggcctctctgctcaactccatgaagtccatcgcttccctg
ttgctgcttctcttcctcttcattattattttctctcttctcgggatgcaactctttggg
ggcaaatttaactttgatgagacagtgaccaaacggagcacatttgataacttcccgcag
gcgctgctcactgtgtttcagatcctgacaggagaagactggaacacagtgatgtatgat
ggcatcatggcgtacggtggtccggcctcatcgggaatggtggtctgcatttacttcatc
atcctcttcatctgtggaaactacatcctgctaaatgtcttcttggccatcgctgttgat
aacctggcagacgcagagtctctcaactcagcccagaaggaggaagaagaggccaaaaag
aggaagaatagtgccaaggacataaatccagataagaaagttgaaattacagaagacaaa
gatggtgagaccaaggtgccaactgaggccttgctacaggaagacaaagagtcacattct
gccactgaatctccaggtgatgatgatgatgacgatgatgataatggtaacctctcggat
gtccctttggggcctcggccccagcggctctctgaactcaccctcaaagaaaagacacca
cccatcccggagggcagcgccttcttcatcttcagcagcaccaacccgtttcgtgttttc
tgccataagctcatcaaccatcagatcttcaccaacctcatcctggtcttcatcatgctc
agttctgtttctctggctgccgaggaccccatacgcaacttctctgctcgcaacatcata
cttggttattttgactatgccttcacggcaatctttactgttgagatcctgttgaagatc
ctaagctatgcagactatgtcttcactagtatgtttacatttgagatccttattaagatg
acagcttttggggcgttccttcataaaggagcattctgtagaaactacttcaacctttta
gacctgctggttgttggtgtgtctcttgtttccttcggcattcaatcctctgctatctcg
gttgttaagattcttcgtgttttgcgagttctccgtccactcagggccatcaacagagcc
aagggactcaagcatgtagtgcagtgtgtatttgtagccatcaggaccatcgggaacatc
atgattgttaccacgctgctgcagttcatgtttgcctgtatcggagtgcagctcttcaag
ggtaaattctatcgatgcaccgatgatgcaaagtccagcccagatgaatgcaagggaaca
tacattctgtacaacaatggggacacagcactgcccatggtgaaggagaggatttggcac
aacagcgacttcaattttgacaacgttctcatggccatgatggctctttttacggtctct
acttttgaaggatggcccactctgttgtacaaagccatcgactctaacagggagaacatg
ggccccatctacaactaccgcatcgagatctccatcttcttcatcatctatatcatcatc
atcgccttcttcatgatgaacatctttgttggtttcgtcattgttacctttcaggagcag
ggagaaaaggagtacaagaactgtgagctggacaagaaccagcgtcagtgtgtagagtac
gcactaaaagcgcgtcctctgcggcgctacatccccaaaaatccctaccagtacaagttc
tggtatgtggtcaactccactggctttgagtacgtcatgtttgtcctgatcatcctcaac
actttgtgtctggccatccagcaccacggtcagtctcatctgttcaactatgccatggac
atcctcaacatggtctttaccggagtttttactgtagaaatgatcctgaagctcattgcc
ttcaaacccagaaactattttgctgatgcatggaacacgtttgatgccttaattgttgtg
ggtagcgtggttgacattgccatcactgagatcaataacacagaagacagtgctcgaatc
tccatcaccttcttccgcctgttcagggtgatgcgtctggtcaaactgctgagcaggggg
gaggggatccggactctgctgtggaccttcatcaaatccttccaggctcttccttatgtt
gcccttctgatagccatgctgttcttcatctatgctgtaatcgggatgcaggtgtttggg
aaaatagcgatggtggatggaacacaaatcaaccgcaacaataactttcaaacctttccc
caagcggttctgatgctcttcaggtgtgccacaggtgaggcgtggcaggagatcatgctg
gcctgtctgccagggaagctgtgtgactccgagtcggactacaaccccggagaggagagg
acctgcggcagcggctttgccattatctacttcatcagcttctacatgctttgtgcattc
ttgatcatcaacctcttcgtagctgtcatcatggataactttgactacctgacccgagac
tggtccattcttgggccgcaccacctggacgagtttaaaaggatctggtctgaatatgat
cctgaggccaagggcaggataaaacatcttgatgttgtcactctgctgaggaggatccag
cctccgttgggctttgggaagctctgccctcacagagtcgcctgtaagcggctggtggcg
atgaacatgcctctcaacagcgatgggactgtcatgtttaacgccactttgtttgctctg
gtccgcaccgctctcaagatcaaaacggagggtaacttggagcaagccaacgaggagctc
agagctgtgatcaagaagatctggaagaggaccagcatgaaactgttggatcaagtggtt
cctcctgcaggcgatgacgaggtaacagtggggaagttctatgccaccttcctgatacag
gactacttcagaaagttcaagaggcgcaaagagcaaggtcttgtgggaaggaggtcatgg
gagaggctgaacaccactttggctctacaggccggcctgcggacgctgcatgacattgga
ccagaaatctgtcgagccatatcatgtgaccttcaggaagagggactggtggatggaaca
ggagaggaagaggaggaaatctacagacgtaatggcgggctctttgggaaccacgttaac
cacggggatcagcagggctcctcccacctcaccaccgtcacacagcgcccgctacagatc
ctgcccttctacggcaccccgtcaatcgcacccacccagactgtcacgagggccagcagc
agcgacaaggagggagaaacagagatgaactcctcacccatccagtataatcaccatccc
agccctcacctgtacgattaccctcactgtaattccacctgccatcagtcaccaataccc
tccaacgccaacctcaacaacgccaacgtcccctcgcttctctcgatgacctccgggagg
caacagaagtgtttattacagcggtgtcggccttcctccaccagaattggatcctcaaca
acttacagcagaggactgcacaacaaaccatggaagtcgcactccacgaggacgcgctac
tatgaagcctacattaggtcaaaaaatggtggaggactttaccccaccatttgtcgagag
cagccggggggcggtgacagcgatgacgagcggggctcaggggagtatttcagcggggag
gaatttcacgaagatgacatcatgctcacaaaggaaagattgtccaggacgaactttcat
catgattcagatgaagattttgacctctccagggaggactgccagcctgatagttactat
gacaacgacaaacagcctatctgccaagatggccgatggtcacctaggagatggttttta
ccttcacctcaagcctcccacacaccaacattcagctttgagtgtcttcgcagaagaagt
agttcagacgatcctcctctttctccactgtgtacagctcttcctctgcaactgatgcag
caacaggtgatggcggttgccggtctggatgccagcagaattcagcggctgtcacctaca
aggtcactgcgctcatgggccacacctcctgcctcccccatcagctgtgactgctccacc
tcctacacaccactcattcaggtggactggcggagctctggcagtgtgggcagcatcccc
ggagccatgaagaggagttcctggtacacagacggccaagatggctgccccagtcgcagc
cactctccatcacgcctgcagctacctacagagagctgctcgcacttccagcagaagaga
cgcagcgccaacagtctggtggaagctattctgatctctgaaggtttagggaaatatgcc
cgggatccaaagtttgtgtcagcgaccaaacacgagattgcggacgcctgcgagatgacc
atcgacgaaatggagagcgctgccagtaacctgctgaacggcagtatgggtaacggcagc
acgggaggaacagcggacgtcggctccgactcgcaccccatcacgcacctgagggaccac
cgtgactacagcgacgaggagccgtacgtggcggtgaaatgtgaggaggacctaacagat
gagatgatatgcatcacttcgctatag
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integrated database retrieval system
