Kryptolebias marmoratus (mangrove rivulus): 108236897
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Entry
108236897 CDS
T05608
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
108236897
Domain-containing proteins not elsewhere classified [BR:
kmr04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
108236897
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_N
THSD1_D3
THSD1_D2
TSP1_spondin
TSP_1
TSP1_ADAMTS
TSP1_CCN
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
108236897
NCBI-ProteinID:
XP_017273443
UniProt:
A0A3Q2ZDV2
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All DBs
Position
LG13:complement(11658782..11665524)
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AA seq
949 aa
AA seq
DB search
MPQAASQLSFLLLLGGYAFAGLSIWPSFHVALSNGSVFVDFSTKSNSSTVSNMTLSLVDM
ATNTTVLTRTLPRSRPVGRVEFECSCFLYAGTFRFLLRQTSVTAVSQANETDGTHAESST
WWWSSELQVQWPTFHISVERAGNHSGSFQIGISTNEQFQACSSDTNSALFLDVSFMEYNQ
IGKNTVRAHIRKTIKPLRSQSVELSCAFPFTDKNFIKVALRSPHTAQEVKSSGPLYLSRI
FFYKLLVENVNAYKSGCEGSVTVKMIAPPCAHISGKVLLYGDAGVRRGLAAPAGMEFVPE
EPSSPPLAFNWLTRGENKTEFNCSLFYPGKNKYCFRFVFNFSRSPSPAQTQCLVVYRNAE
SWGPWQPWRVCSVSCGEGVRERVRECLLPSGVRGTQCPGMVKEQSLCSLEDCNVLSSPSP
SLSPVPAGVQPLDGNMIAVVGIFLCLAVITATVVVTVWKKLCQTPQCSSVHRGSIHSPGG
RKLSDEASICGHSLQRPSLCDGHGPSGDTGFQKDRPSIGTQPLSPQALVMPLPQAPERLS
PTGQKVLPTIFGYRLAQQQLKEMKKKGLKEATQLYHVSSSPVHDTMVETSASPTTSPVPS
PTGFAHSALPVGLQDNVNQDQFCVATPLSELSPQTSKVTSDRLSPRVELVLGPPVSAHSS
RRNSNWRDRTADWVEMIERSGLAGLGGGGEDASSGNAYYKNPNFRRTSSFNDTKPQLLSS
ARSRQFRERSMTQVGSRTLPEGSCWTKRGWERQPHHSYPIPEHGIAEWAKARPQISDQKK
PWMETAVPSHNNQLKHTGTNTNGLSASEKRAEADFRRTAERRKVGEPGGAGGESVSGIGG
PPAGLPRSHEVNQLSVDRAEQNWNRRGPSPIQRNMLARKLKEAQSCSGVRGRKRSSSFNV
SSSEQRRDRCHSLPMSKTYNSAASPYRLSEAEQRMLDLDLSPVFVQEEE
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgccacaggctgcctcccagctgtccttccttctgctgcttggaggatacgcttttgca
gggctcagtatctggccctcctttcacgtcgccctcagcaatggcagcgtgttcgtggac
ttcagcacaaagtccaacagcagcaccgtcagtaacatgacgctctctctggtcgacatg
gccaccaacaccacggttctaaccaggactcttccccgcagccgaccggttggacgggtg
gaattcgaatgttcctgcttcctgtacgcaggaactttccggttcctcctgaggcagacc
agcgtcacggcagtttctcaggctaacgaaacggacggcactcacgcagagagctcgacc
tggtggtggagttctgagctgcaggtgcagtggcccacctttcacatttctgtggagaga
gcagggaaccactcgggatcttttcagattgggatatccactaatgaacagtttcaggct
tgctccagtgacaccaactctgccctcttcttagacgtgagcttcatggagtacaaccag
atagggaagaatacggttcgagcccacatacggaaaacaatcaaacccctccgctcccag
agcgttgagctgtcctgtgcgttcccgttcactgacaagaacttcatcaaagtggctttg
aggtcgcctcacacagcacaagaggtgaagagctctggccctctctacctgtcccgcatt
ttcttctacaaactgctggtggaaaacgtcaacgcttacaagagcggctgcgagggatcg
gtgactgttaaaatgatagcgccgccgtgcgctcacatcagtgggaaagtgttgctgtac
ggcgatgcaggtgtcagacgaggcctggctgcccccgcagggatggagtttgtaccagag
gaaccctcttctcctcctctggccttcaactggctgactcgaggagagaacaagactgaa
ttcaactgctctttgttctaccccgggaaaaacaagtactgctttcgctttgtcttcaac
ttcagccgttcccctagtccagctcagacacagtgtctggtagtttacaggaatgcagaa
tcttgggggccctggcagccgtggagggtgtgcagcgtgagctgtggcgagggggtgagg
gagcgggtgcgcgagtgcttactgccctcaggtgtgcgagggacgcagtgcccgggaatg
gtgaaggagcagtctctctgctcgctggaggactgtaacgtgttatcttctccttctcca
tctctctcccctgtacctgctggagttcaaccccttgatggaaacatgatcgcggtggtg
ggcattttcctctgcttggctgtgatcacggctaccgttgtggtgactgtgtggaaaaag
ctctgccagacgcctcagtgcagctcggtccatagaggctccatacattcccctgggggg
cgcaagctttcagacgaggcctccatctgtggccacagcctccaaaggcccagcttatgt
gatggccatggcccatcaggggacactggtttccagaaagacagaccctctattggaact
cagcctctttcgccacaggcgctggttatgccacttccacaggccccagaaagactgtct
cccacaggccagaaggttttaccgacaatatttgggtaccggttggctcagcagcagcta
aaagagatgaagaagaaggggttaaaagaggccacacagctgtaccatgtctcctcaagc
cctgtccatgacaccatggtagagacatctgcctcacccactacctcccctgttcccagt
ccaacagggtttgctcattctgcccttcctgtgggtctgcaggacaatgttaatcaggat
cagttttgtgttgcaactcccctgtcagagctgtcaccgcagacctcgaaggttacgtca
gacagattgagtcctagagtggagcttgtccttggtccgcctgtctctgctcattcaagt
aggaggaactcgaactggcgagaccgcactgctgactgggtggaaatgatagagaggagt
ggattagcaggcctaggaggaggaggagaagatgcttcatcaggaaacgcttactataag
aatccaaacttcaggcgcacctccagttttaatgacaccaaaccccagctgttgtcctca
gctcggtccagacagttcagagaaagaagcatgacccaggtggggtctcggacgcttcca
gaaggaagctgttggaccaaaagaggatgggagagacagccacatcattcataccccatt
ccagagcatggcatcgcagagtgggccaaagccaggccccagataagcgaccagaagaag
ccctggatggaaacagcagttccgtcacataataatcaactcaaacacacaggaacaaac
acaaatggcttatcagcgtctgagaaacgcgccgaagcagacttcaggagaactgcagaa
agaagaaaggttggcgagccgggaggtgcaggcggtgagtcagtctcagggatcgggggc
ccacccgcaggacttcccagatctcacgaagtgaaccagctgagtgtggatcgggccgag
cagaactggaaccgccgtggcccgtcacccatccagaggaacatgctggcccggaaactg
aaagaggctcagtcctgctcgggggtcagagggcgcaagcgcagctccagcttcaatgta
tcgtcctcagagcaaaggagagaccggtgccattctctaccaatgtctaaaacctacaac
agtgcggcctctccctacaggctgagtgaggcagaacagaggatgctggacttggatctg
tccccagtatttgttcaggaggaggaatag
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