Kryptolebias marmoratus (mangrove rivulus): 108236900
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Entry
108236900 CDS
T05608
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108236900 (ddx52)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108236900 (ddx52)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
90S particles
Helicases
108236900 (ddx52)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
108236900
NCBI-ProteinID:
XP_017273446
UniProt:
A0A3Q3BIW7
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All DBs
Position
LG13:12463444..12467994
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AA seq
681 aa
AA seq
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MLISAVGKETTLPACCLFAAASTPMDAFELFRKLGAGAKFDLKRFGQDAARFKGVRPQSG
EETSCPLSAIDYFGSGPANGAQRKDGGEEDEEESASGDSGEGGKRMREEEEEERGVRRRK
KKTKSNQVEVEGSVRQLNETQGIAWISSLDKKVQHLQSDGNEKSTLKRLKHLHQEKVNRI
RAKHRINVHGSDVPDPVCTFDELLSEYRLNARILQNLRDAGLTAPTPIQMQAIPIMMHGR
EVLACAPTGSGKTLAFSLPLLAHLQQPANLGFRALIISPTRELASQTHRELLRLSEGVGF
RVHIIDKASLAAKKYGPQSNKKYDILVSTPNRLIYLLKQDPPAVDLSSVEWLVVDESDKL
FEDGKTGFREQLATVFLACSGAKVRRAFYSATCTPEVEQWCRLNLDNLVSVNIGHRNTAV
ETVEQELLFVGTENGKLVAMRDIIKKGFLPPMLVFVQSKERARELFHELVYEGINVDVIH
AERTQQQRENVVNSFRSGKIWVLICTALLARGIDFKGVNLVLNYDFPTSAVEYIHRIGRT
GRAGHQGKAITFFTENDKPLLRSIANVIKQAGCPVPDYMIGFKKIHSKAKRRLEKKPPKR
TTICTTPRFLMKKRGKVQKKEPEQKGETEPPTAVQQQKERRTKAATKGGKKHKDATRKTG
SKSSGVRLKKTKGQKVSSKMD
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgttgattagcgctgtggggaaagagaccacgctgcctgcttgctgcctgtttgctgct
gcttccacgcctatggatgccttcgagctgttccgaaagctcggagctggagctaaattc
gacttgaagagatttggtcaggacgccgctcgttttaagggtgtcagacctcagtcaggg
gaggaaacttcatgtcctctctctgcgatcgactacttcggctcaggaccagctaatgga
gcccagaggaaagatggcggcgaggaggatgaggaggagagtgccagcggagactcggga
gaaggaggcaaaaggatgcgcgaggaagaggaagaagagaggggcgtgaggcgcaggaag
aaaaagaccaaaagcaaccaggtggaggtggaaggtagcgttcggcagctgaacgagact
cagggcatcgcttggatctcctcgctggataaaaaagtccaacacctgcaaagtgacgga
aacgagaaatccacgctaaagaggctgaagcatcttcatcaggagaaggtgaaccgtatt
cgtgccaaacaccgtataaacgtgcacggcagcgacgtgcctgaccctgtgtgcacgttt
gacgagctgctgtccgagtatcgtctcaatgctcgcattctccagaacctcagagatgca
ggactgaccgcgccaacgccaatacagatgcaggcgataccgatcatgatgcacggtcgg
gaggtcttggcatgcgctcccacgggatctggaaaaacgctggcattctccctcccgctg
cttgcccacctgcagcagccagcgaatctgggcttcagagctctgatcatctccccaacc
agagaactggccagtcagacccacagagagctgctccgcctgtcggagggagtcgggttt
agagttcacatcatcgataaagcttccctggctgccaagaaatatggaccacagtcaaac
aagaaatatgatatcctcgtcagcactccaaacagactcatctaccttctgaagcaggat
cctcccgctgttgacctcagcagtgtggagtggctggttgtcgacgagtctgacaagctg
tttgaagacggtaagacgggcttcagggagcagctggccaccgtttttctcgcctgctct
ggtgcaaaggtgcgcagggctttctacagcgccacgtgcacaccagaagtagagcagtgg
tgccgactgaacctcgacaacctggtttctgtcaacatcggacaccggaatacagcagtg
gagacggtggaacaggagctgctgtttgtcgggacagagaacggcaagcttgtggccatg
agggatatcatcaaaaaaggtttcctcccgcccatgctggtgtttgttcagtccaaggag
cgagcacgagagctcttccatgagttggtttacgaaggcatcaacgtggacgtgatccac
gccgagcgcacacagcagcagagggaaaacgtggtgaacagctttcgctccggtaagatt
tgggtgctgatctgcacggctctgctcgccagaggaatcgatttcaaaggcgtgaacctt
gttctgaactacgacttccccaccagcgctgtggagtacatccaccgaattgggcgtacg
ggcagagcggggcatcaagggaaggccatcaccttcttcacagagaatgacaaaccattg
ttgcgcagcattgctaatgtaataaaacaagctggctgtcctgtaccagactacatgata
ggcttcaagaaaatacacagcaaagcaaagcgaagacttgagaagaaacctcccaagaga
accactatttgcacaactcctcgcttcctaatgaagaaaagaggcaaagtacagaaaaaa
gaaccggagcagaaaggagaaactgaacctccaacagcagtgcaacagcaaaaagaacgc
aggacaaaagcagcaacgaaaggagggaaaaaacacaaagatgcaactcggaagacagga
tcaaaatcatcaggagttaggttaaaaaagacgaagggtcagaaagtttcatctaagatg
gactga
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