Kryptolebias marmoratus (mangrove rivulus): 108236940
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Entry
108236940 CDS
T05608
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03030
DNA replication
kmr03410
Base excision repair
kmr03420
Nucleotide excision repair
kmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108236940 (rfc3)
03410 Base excision repair
108236940 (rfc3)
03420 Nucleotide excision repair
108236940 (rfc3)
03430 Mismatch repair
108236940 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108236940 (rfc3)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108236940 (rfc3)
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108236940 (rfc3)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108236940 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
108236940 (rfc3)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108236940 (rfc3)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108236940 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
108236940 (rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA
AAA_22
AAA_16
nSTAND6
AAA_11
ABC_tran
Sigma54_activ_2
AAA_33
ATPase_2
Motif
Other DBs
NCBI-GeneID:
108236940
NCBI-ProteinID:
XP_017273508
UniProt:
A0A3Q2ZWH2
LinkDB
All DBs
Position
LG13:complement(10389637..10392629)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWLDKYRPTSLGKLDFHKEQAAQLKNLVQGGDFPHLLVYGPSGAGKKTRIMCLLRELY
GPGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTVAQSQQ
IQSSTQRDFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRIILCSTSTSKVIEPIRSRCL
AVRVPLPSTEEVCSVLTSVCKKEGLLLPPELAKQICEKSGRNLRKALLMCEACRVQQYPF
SADQDVPEPDWEVYLRDTANAIVSQQTPQRLLEVRGRIYELLIHCIPPDIIMKSLVKELL
NNCDGQLKTEVANLAAYYEHRLQLGSKAIYHLEAFTAKFMAMYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtggttggacaaatatcgaccgacatccctcgggaagctggactttcataag
gaacaagcggctcagctgaaaaacctggttcagggcggcgacttccctcacctgttggtg
tatggtccgtcaggagccgggaaaaagacccgcatcatgtgtttactgagggagctgtac
gggccaggagtggagaagcttcgcattgagcaccagactatagtggctccatcaaaaaag
aagattgagattaacacgatagccagcaactatcacttggaggtcaacccaagtgatgca
ggaaaccaggaccgtgtggtgattcaagagctgattaaaactgtggcccagtcccagcaa
atccagtcgagcacccagagagacttcaaagtggtgttgctaacagaggtggacagactc
acaaaagacgctcagcacgctttgcgtcgcacgatggagaagtacatggctacctgccgc
atcatcctctgctcaacgtccacctccaaagtcatcgagccaatcaggagccggtgtctg
gcggtcagagttcctctgccgagcacggaggaggtctgcagtgtgctgacatcagtgtgt
aaaaaggagggtctgctcctgccccccgaactggccaaacaaatctgcgagaagtccgga
cgcaacctccgcaaagcccttttgatgtgcgaggcctgcagagttcagcagtacccattc
tcagctgaccaagatgtccctgagccggactgggaggtctatctgagagacaccgcgaat
gccatcgtcagccagcagacccctcagaggctgctggaggttcgaggtcggatatatgaa
ctgctgattcactgcatccctcctgacatcatcatgaagagtttggtgaaagaactgctg
aataactgcgacggacagctgaagacagaggtggccaacctggcggcgtactacgaacac
agactacagctgggcagcaaagccatctaccacctggaggctttcacagccaagtttatg
gccatgtacaagaagtttatggaagacgggctggatgctatgatgttttaa
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integrated database retrieval system
