Kryptolebias marmoratus (mangrove rivulus): 108237005
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Entry
108237005 CDS
T05608
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
KO
K14855
ribosome assembly protein 4
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kmr03009
]
108237005 (nle1)
Ribosome biogenesis [BR:
kmr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
108237005 (nle1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Aladin
ANAPC4_WD40
DSE1_N
WDR90_beta-prop_4th
Beta-prop_SCAP
ASA1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
CFAP251_N
Beta-prop_RIG_2nd
NLE
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_EIPR1
Beta-prop_DCAF12
PAC11
Beta-prop_DCAF4
TRM82_WD
Beta-prop_WDR35_TULP_N
Tricorn_2nd
Beta-prop_NOL10_N
eIF2A
Beta-prop_SPT8
Beta-prop_HPS5
WD40_RFWD3
PD40
Ge1_WD40
RMC1_N
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
Beta-prop_NWD2_C
Cytochrom_D1
WDR54
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
108237005
NCBI-ProteinID:
XP_017273646
UniProt:
A0A3Q3EFE3
LinkDB
All DBs
Position
LG13:12300186..12306470
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AA seq
478 aa
AA seq
DB search
MESEDVERMLIQFQNENGEVLGSPFDVPLDITQDKLQLVCNALLQKEEPVPVAFFVRGEA
EVVSTLRSCVTALKVETEQVLPVVYQVEALFKVRAVTRCTSTLQGHTEAVISTAFSPTGK
YLASGSGDTTVRFWDLTTETPIHTAKGHTHWVLSIAWSPDGKKLASGCKNSQIFLWDPVT
GTQIGKTLTGHTKWITWLCWEPLHLNPECRYLASSSKDGTLRIWDTVLGRCEKILTGHTQ
SVTCVKWGGDGLLYTSSQDRTVKVWRAKDGIQCRTLQGHAHWVNTLALSTDYVLRTGAFE
PATATINPQDLTGSLDELKERALQRYKKVRGSAPERLVSGSDDFTLFMWNPAEEKKPLAR
MTGHSALVNEVLFSPDTRLLASASFDKSIKIWDGRTGKYLMSLRGHVGSVYQVAWSADSR
LLVSGSSDSTLKVWDVKTGKLNMDLPGHADEVFAVDWSPDGQRVASGGKDKCLRIWRR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgaggacgtggagcggatgctgatccagtttcagaatgagaacggcgaggtt
ctgggttcaccttttgatgtgcctttagacattacccaagacaaactgcagcttgtctgc
aatgcgttacttcagaaggaggagccggtacctgtggcgttttttgtgcgtggagaggca
gaggtggtgtctactctgagatcttgtgttacggctcttaaagtcgagacagaacaagtt
ctgccggtggtgtaccaggttgaggctttgttcaaggttcgggctgtgactcgctgtacc
agcaccctacagggacacaccgaagccgtcatttccaccgctttcagccccactggcaaa
tatctggccagcggttcaggcgacaccacagtgcgcttttgggacttgactaccgagaca
cccattcatactgccaaaggacacacgcattgggtgctgagcatcgcctggtcacctgat
ggaaagaaattggcttcagggtgcaagaacagtcagatctttctctgggatccggtgact
ggcacacagattgggaagactttaacaggacacaccaagtggatcacgtggctctgctgg
gagcctcttcatctgaacccagaatgtcgttacttggcgagcagttccaaagacggcact
ctgcgcatctgggacactgttctgggacgctgcgagaagattttgaccggacacactcag
tcggtcacctgtgtgaagtggggaggagacggacttctctacacttcttcccaggaccga
accgtcaaagtgtggagagcgaaagacggcatccagtgcaggactctgcagggtcacgcc
cactgggtcaacaccctcgctctcagcacagactacgtcctgcgaactggagcttttgaa
cccgcaactgcaacgataaacccacaggatctcaccggatctttggatgagttaaaagag
agagcgttgcaaagatacaagaaagttagaggttcagctccggagcgcttggtgtccggc
tcagacgatttcacattgttcatgtggaatcctgcggaggaaaaaaaacctttggccagg
atgacgggccacagcgctctggtcaacgaagtgctcttctcccctgacaccagactgctc
gcttctgcctcattcgataagtccatcaaaatctgggatggacggactggcaagtacttg
atgtctctgcggggccacgtgggctctgtgtatcaggtagcatggtcagcagacagcagg
ctgctggtcagcggcagcagcgacagcacgctcaaggtgtgggacgttaaaacagggaag
ctcaacatggatcttccaggccacgctgatgaggtttttgctgtggactggagtcctgat
ggacagagagtggccagtggtgggaaagataaatgtctccgaatatggagaagatag
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