Kryptolebias marmoratus (mangrove rivulus): 108237093
Help
Entry
108237093 CDS
T05608
Symbol
pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03430
Mismatch repair
kmr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108237093 (pms2)
03460 Fanconi anemia pathway
108237093 (pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108237093 (pms2)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108237093 (pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108237093
NCBI-ProteinID:
XP_017273786
UniProt:
A0A3Q3A560
LinkDB
All DBs
Position
LG17:complement(12661854..12668820)
Genome browser
AA seq
857 aa
AA seq
DB search
MSDICTSEPAGAIRAIDKHSVHQICSGQVVLTLATAVKELLENSIDAGATNIDVKLKECG
AEQVEVSDNGKGVEEANFEGLTLKHHTSKLKDFSDLIHVETFGFRGEALSSLCALSDLSV
ITCHKSNQVGTKLVFDQKGHLVQKSPHPRQQGTTVTLQQLFYTLPVRYKEFQRNIKKEYS
KMIHILQAYCIISTGVRITCSNQNGQGKRSTVLSTSGSQSMRDNIGAIFGPKQLQSLLPF
QQVPPTENILEEYGLKGADLPKQLFLITGFVSRGDHGVGRSATDRQFFFINNRPCDPLKV
TKLVNEVYHMYNRHQYPFVALNIAVAPECVDVNVTPDKRQIFLQEEKLLLAILKTSLITM
YEAGVNKISLNFTPTAIASSASEGAVLSNENEAKPGENIQTARPSPKSSMNLAALKAAFS
NHTSTSSGNRSSKERASSCGSTQKTLQCFFRDSTKPVCSQSMKSPLKPTREKCNSSPAVR
SVLDGFRYGGSEKDSEKDKTVSSCDFTVSAPDVQHPDPEFNSPQLVINTSSVKEKLLLSA
ASSSSVPEDPELQTEAGSSTEDSSLSPEAKRAKTEEQGFTTERLFDSSSNCFDTSSSMVD
APVSLQRRTGHLRFSLKELAANMRRLQEQQKQRSSEELQYRRFRAKITPGENQSAENELK
KEISKEMFKEMEIIGQFNLGFIIAKLNWDIFIIDQHATDEKYNFEMLQQHTVLQGQKLIA
PQKLHLTAVSENVLMENIEIFQKNGFEFLIDEDAQAMERVKLVSLPTSKNWTFGPADIEE
LIFMLSDSPGVMCRPSRVRQMFASRACRKSVMVGTPLSGSEMKKLVVHMGEIEHPWNCPH
GRPTLRYLANLNIISQN
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatatctgcacatctgaacctgctggagccataagggctattgacaagcactca
gtgcaccagatctgctccggacaagtggttctgactttagctactgctgtcaaagagctg
ctggagaacagcattgatgctggagccaccaacattgatgtcaaactgaaggagtgtggt
gctgaacaagtagaagtgtccgacaatggcaaaggtgttgaagaggctaactttgaagga
ctcacactgaagcatcacacgtcaaagctgaaggatttctccgatcttatccacgtggaa
acttttggcttccggggtgaagctctcagctctttatgtgccctgagcgacctgagtgtg
attacatgccacaagtcaaatcaggtgggcaccaagctggtgtttgaccagaaaggccac
cttgtgcagaaatcccctcatcccaggcagcagggcaccacggtcaccctgcagcagctc
ttctacacgctgcccgtccgatacaaggagttccaacgcaatattaagaaggaatattcc
aaaatgatccacatcctgcaggcgtactgcatcatctccacaggagtccgaatcacctgc
tccaaccagaacgggcaggggaagcgcagtaccgtcctcagcaccagcggtagccaaagt
atgagagacaacattggagccatatttggaccaaaacagcttcagagtcttttacctttt
cagcaagtgcctccgacagagaatatacttgaagaatatggacttaagggtgcagatctg
cccaaacagctttttttaatcacagggtttgtgtcgaggggtgaccacggggttgggcga
agtgccacagacaggcagttcttcttcatcaacaaccggccgtgcgatcccctgaaggtc
accaaacttgtgaatgaagtttatcacatgtacaaccggcaccagtatccgtttgttgcc
ttaaacatcgctgttgccccggaatgtgtggatgtaaatgtaactccagacaaacggcag
attttcctccaagaggagaaactcttgctggccattctgaagacttccctaatcaccatg
tatgaagctggagtcaataagatcagcctgaacttcacaccgacagccattgcgtcctct
gcatctgaaggagctgtcttgtctaatgagaacgaggcgaaacctggagagaacatccaa
accgcgaggccaagcccaaagtcatccatgaacctggccgccctcaaagctgccttttca
aaccacaccagcaccagttctgggaacaggtcgagcaaggaaagggcttccagctgtggt
tcgacccagaaaacgctgcagtgtttcttcagggattctacaaagcccgtttgcagtcaa
agtatgaagtctcctttaaaacccacacgagaaaaatgtaattcctccccagcggtaagg
tctgtgctggatgggtttaggtatggagggagtgagaaggactctgaaaaagacaaaact
gtttccagttgtgactttacagtatcagcaccagatgtacagcatcctgacccagagttt
aactctcctcagctggttattaacaccagcagtgtaaaagagaagttgcttttatcagca
gcatccagtagttctgttcctgaggatccagagctacagactgaagccggctcatctact
gaagactcctcactgagccctgaggccaaaagagccaagacagaggagcagggtttcact
acagagcgattatttgactcttcctcaaactgctttgacacctcttcctcgatggtggac
gcccctgtgagcctgcagcggaggacggggcatttacggttctccctgaaggagctggca
gcgaacatgcggaggctgcaggagcagcagaaacagaggtccagtgaagagctgcagtac
agacgcttcagggccaagatcacccccggagaaaaccaaagtgcagagaacgagctcaag
aaagagatcagcaaagaaatgtttaaagaaatggagatcatcggtcagtttaacttgggc
ttcatcatcgccaaattgaactgggacatcttcatcattgaccagcatgccacagatgag
aaatacaacttcgagatgctacagcagcacactgtgctccaaggacagaagcttatcgcc
ccacagaaacttcacctcactgctgtcagcgagaacgtactgatggaaaacattgagatt
ttccagaagaatggctttgagtttctgatcgacgaggatgctcaggcgatggagagagtg
aagctggtctcgctgcccaccagtaagaactggaccttcggcccagctgacattgaagag
ctgatcttcatgctgagtgacagcccgggggtcatgtgccgcccctccagagtcagacag
atgttcgcctccagagcctgtcggaaatcagtgatggtcggcacccctctgagtggcagt
gagatgaagaagctcgtggtccacatgggggagatcgaacatccgtggaactgcccccac
ggcaggcctaccctgagatacctcgccaacctgaacatcatctcacaaaactaa
DBGET
integrated database retrieval system
