Kryptolebias marmoratus (mangrove rivulus): 108237242
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Entry
108237242 CDS
T05608
Symbol
ift140
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
kmr03037
]
108237242 (ift140)
Cilium and associated proteins [BR:
kmr03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
108237242 (ift140)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
WD40_Prp19
Beta-prop_EML
TPR_GEMI5
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
Beta-prop_ELP1_2nd
tRNA_int_end_N2
Clathrin
TPR_COPA_B
RNase_HII
TPR_12
Motif
Other DBs
NCBI-GeneID:
108237242
NCBI-ProteinID:
XP_017274041
UniProt:
A0A3Q3FZ72
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All DBs
Position
LG17:14314189..14334470
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AA seq
1445 aa
AA seq
DB search
MAVYFDHRIEAPENSAVPSHLMWHSTLPVLAVASSSPASGGSVDLYLQQGEHVESCHVER
PHQPTVLRWHPIKPVLAVGWENGEVALLIHPSGDQTVLPSSHTAHITLLEWSTSGSRLVT
GDQTGALAVWKLDARGRLLGNHLVKHEYNKPLTCCIFRPASPGDDVAMLARASVSGDESA
LDMFSWKGAPLKMGPQEGLAFYVSTADGKVHVVDEHCKTSTLLSVEGSIKKLFYFEKREV
FAMITDTLMLSQYKLRPEGGAQEVMKVKLSSKAGQNIDIIWTEDSFLITATGEQTIRLLD
LERDANYVLSLDETLGFEKGEMINCVSYCAAKEILAAGTSHGHIAMWKMVMQPSSSRLDT
KALWKLQTPTEIEGNVTQLQWGSSQNLLAANNSQTVLILCEHVMSAHYNQQVAAVQLTPT
QLSISHFTTGVHLALQSDMHIKGVCVSKDSVTVWNGKLVNVYELSGTVLRSTGSFSCDSQ
VVAVHDENLYTVEPNRVQIRTPQGTVKQLLTFSKAEGNPVLLSVCQSYLVVGTDTAHIRV
FDLSRRDAKAHCSAKNLADQIPNLGALRSVRCNANGSQVSILISQVNGRPDHKVYFYDVE
MDTVTHFDFFTGRPSSGVFQPEESDKQKFQGAEFSGRCPVSHFWDESEPRLFVCETVPIS
SEISSKTCLDMVDVSVVTLFCTQEHGLLLQDCFPKPSGLQALLALDVPYYYFSCKPGEKD
PGSTEASSPSQQSQPTGEAPGQFSHMVSRRALRDFVGLEGCEKATRDAMLNFSFYLTIGD
MDEAFKSIKLIKSKAVWENMARMCVKTRHLDVARVCLGNMGIARAAKAVKEAEAEPEPEA
QVAMLAIQLNMLEDAEKLYKSCQRHDLLNALYQASGQWPQALETAESHDRIHLRTTYYNY
AKYLESMGDKTMALAYYEKSDTHMVEVPRMLQDDTSSLEIYVNKMKDRNIYKWWAQYLES
QSDMETALQFYERAQDFLSLVRVHCYMGNIQEASQIANDTGDRAASYHLARHYEGHDDIK
QAVHFYTRAQAYNNAIRLCKENGLDDQLMNLALLSNPEDMMEAACYYEEKGTHMDRAVAL
YHKAGYVSKALELAFATEQFSALQLIAEDLNENCDPALLARCSEFFIKHSQYEKAVELLV
AAKKYNQALELCLAQNLTITEDLAERMTVTDSKDLSEDARKELLEQIADCCMRQGSYHLA
TKKYTQAGNKLKAMRALLKSGDTEKIVFFANVSRQKELFIMAANYLQSLDWRKNPEILKT
IIGFYTKGKAPDLLAGFYEVCAQVEIDEYQDYEKALDALMEAFKCLSKAKDTSGGQQEGR
LADLQHKISLIKKFVHIRRLYPDDTDEAVQLCEALLEEPELDPAVRIGDAFGFLVEHHCQ
QGNFQTAYQKLEELQKLLPSQNVRYYISQVSLDALQREMGVPLGRSDHRPSLKEDDEVEE
ELNVS
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtattttgaccaccgtatcgaggcccctgaaaacagtgccgtgccctctcac
ctgatgtggcactcgacccttccagtcctggctgtggcctcaagcagccctgcttctgga
ggcagcgtggacctctacctacagcagggagagcatgtggagagctgccacgtggaacga
cctcaccagcccactgtgctccgctggcatcccatcaagccagttttggcagtgggatgg
gagaacggagaggtagcgctgctgatacacccctctggagatcaaactgtcctgcccagt
tctcatacagcccacatcacactgttggagtggagtacgtctggcagccgtttagtaact
ggtgatcagactggcgctttagcggtatggaagttagacgccagaggcagacttttggga
aaccatctagttaagcatgaatacaacaaacctttaacttgctgcatcttcagacctgcc
tctcctggagatgacgtggcgatgttagctcgggcttctgtgagtggagatgagagtgct
ctggacatgttcagctggaagggagcgcctctaaagatgggccctcaggagggacttgca
ttctatgtcagcactgccgatggaaaagtccacgttgtagatgagcattgtaagacgagc
acacttctcagtgtggagggctccatcaagaaactcttctattttgagaaaagggaggtg
tttgccatgatcacagacacccttatgttgtcacagtacaagctgagacctgagggtgga
gcacaggaagttatgaaggtgaagttaagcagcaaggctggtcagaacattgatattatt
tggacagaggacagcttccttattacagcaacgggggaacagaccatcagactgttggac
ctggagagagatgccaactacgttttgtctcttgatgagactttagggtttgagaaagga
gaaatgatcaattgtgtttcatactgtgcagcaaaagaaatcctggcagccggtacctcc
catgggcacatagcaatgtggaagatggtgatgcagccaagcagcagcagattagacacc
aaagccctgtggaaattacaaacacccactgaaatagaaggaaatgtcactcagctacag
tggggctccagccagaatctgttggcagcgaacaattcccagacagtgctgattctctgt
gagcatgtcatgtcagcgcactacaaccagcaggtggcagcagtgcagctcaccccgaca
cagctcagcatctcccacttcaccacaggagtgcaccttgctctgcagtctgacatgcac
ataaaaggagtgtgtgttagcaaggactcagtgacagtctggaatggtaaactagtcaat
gtatatgagctctcagggacagttttacgcagcacaggatcattttcttgtgattcccaa
gtggtcgctgtacatgatgagaacctctacactgtagagccaaacagggtgcaaatccgt
acgccacagggcacagtaaagcaacttttaactttctccaaggcggagggaaaccctgtg
ctactcagcgtgtgccagtcttacctggtggtaggcacagacacggcgcacatcagagtg
ttcgacctctccagaagagatgccaaagctcactgcagtgctaagaacttggcagaccag
attcccaatctaggggctctgaggtctgtcagatgtaatgccaatggcagccaagttagc
atcctaatctctcaggtaaatggacgacctgatcacaaagtgtacttttatgatgttgag
atggacactgtgacgcactttgacttcttcactgggaggccatccagtggtgtctttcag
ccagaagaaagtgataagcagaagtttcagggggcagaattcagcggtcgctgtcccgtg
tctcacttctgggacgaaagtgaaccccgcctttttgtttgtgagacagtgccaatcagc
tccgagatctcgtcaaagacctgcttagatatggtggatgtatcagtcgtgacactcttc
tgtacacaagaacacggactcctcttacaagactgtttcccgaaaccttcaggtctgcaa
gccctactcgctctggacgtgccctactattattttagctgcaagccaggagagaaggat
ccaggctcaacagaagcttcatccccttcacagcagagtcagccaacaggagaagctcct
ggccagttctcccacatggtgtccaggcgagctctaagagacttcgttgggctggagggc
tgcgagaaggccacccgcgatgccatgttgaacttcagcttctacctgactatcggtgac
atggatgaagcctttaagtccatcaagctcatcaagagtaaagcagtatgggaaaacatg
gcacggatgtgtgtgaaaacccgccacctggacgtggcacgagtgtgcctggggaatatg
gggattgccagggcggcgaaggcggtgaaggaggcggaggccgagcctgaacccgaagcc
caagtggcgatgttagccattcagctcaacatgctggaagatgcagaaaagttgtacaag
agctgccaacgccatgacctgctgaacgctttataccaggcctctggccagtggccgcaa
gctttggagacggctgaaagtcacgatcgcatccatctgcgcacaacctactacaactac
gccaaatacctggagtccatgggcgacaagacaatggcgctcgcttattatgagaaatca
gacacacacatggttgaagtgcccagaatgcttcaggacgacacatcatctctagaaatt
tatgttaacaaaatgaaagataggaacatctacaagtggtgggcccagtacctggagagc
cagtcagacatggagacagcgctgcagttttatgagcgtgctcaggatttcctctccctg
gtccgggtccactgctacatgggaaacattcaggaggcgtcccagatagccaatgacaca
ggtgacagagcagcatcgtaccacctggccagacattatgagggtcatgatgacatcaag
caagcagttcacttctacacacgagcccaggcctacaacaatgctatacgactttgtaag
gaaaatggtctggatgaccagctgatgaacctggctctgctcagtaacccagaggacatg
atggaagctgcctgttactatgaggagaaaggcacgcacatggaccgagctgtggcactt
tatcacaaggctggttacgtctccaaagctctggagctggcctttgccactgagcagttc
tctgcacttcagctcatcgcagaggacctgaatgaaaactgtgacccggctctccttgct
cgctgctccgaattcttcatcaaacactcccagtatgagaaggcagtggagttactggtt
gcagccaagaagtacaaccaagccctggagctgtgtttggcccaaaacctgacaatcact
gaggatctggccgagagaatgactgtgactgactcgaaagacttgtccgaggacgcccgc
aaggagctgctggagcagatagcggactgctgcatgcgtcagggcagctaccacctggcc
acaaagaaatacacacaggccggcaacaaactcaaggcaatgagggccctcctcaagtca
ggcgacacggagaagatagttttctttgccaacgtttctcgtcagaaagaactcttcatt
atggctgccaactacctccagtctctggattggaggaaaaacccggagatcctaaagaca
atcattggtttctacactaaaggcaaagctccagacctgctcgctggcttttatgaagtt
tgtgctcaggtagaaattgatgaataccaagattatgaaaaggctcttgatgctctaatg
gaggcgttcaagtgtctgtccaaagcaaaggacacttcaggtggacaacaggaaggcaga
ctggctgacctgcagcataaaatcagcctgattaagaagtttgtccacatccgcaggttg
tatcctgacgatacggacgaggcggtgcagttgtgcgaagctctcctggaggaaccggag
ttggatcccgctgtcaggatcggagacgctttcggtttcctcgtggagcaccactgtcag
caagggaacttccaaacggcttatcaaaagttggaggagctccagaagctgctgccgtca
cagaacgtcagatattacatcagccaggtgagcctggacgccctgcagagagagatgggt
gttcctctgggacgcagcgaccacagacccagcctgaaggaggacgacgaagtggaggag
gagttaaatgtgtcttaa
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integrated database retrieval system
