Kryptolebias marmoratus (mangrove rivulus): 108237274
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Entry
108237274 CDS
T05608
Symbol
top2a
Name
(RefSeq) DNA topoisomerase 2-alpha isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmr03032
]
108237274 (top2a)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108237274 (top2a)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
108237274 (top2a)
DNA replication proteins [BR:
kmr03032
]
Eukaryotic type
DNA Topoisomerases
108237274 (top2a)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
108237274 (top2a)
Centrosome formation proteins
Centriole proteins
108237274 (top2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108237274
NCBI-ProteinID:
XP_017274092
LinkDB
All DBs
Position
LG17:complement(13614221..13627035)
Genome browser
AA seq
1582 aa
AA seq
DB search
MAEPLKAFLENKPVEKAKKDPKRLSVERIYQKKTQLEHILLRPDSYIGSVEPVTQQMWVF
DEGIGLNCRDVTFVPGLYKIFDEILVNAADNKQRDKNMSCIKVNIDVENNTISVWNNGKG
IPVVEHKVEKVFVPALIFGQLLTSSNYNDEQKKVTGGRNGYGAKLCNIFSTKFTVETACK
ESKKVFKQTWYDNMGRTGDANIKPFDGEEYTCITFRPDLAKFKMNILDKDTVALMTRRAY
DVAGSSKGVKVFFNGKRLPVSGFRSYVNMYVQDKVDELGAPLTVIHDVVNERWEVCLTLS
EKGFQQVSFVNSIATTKGGRHIDYVADQVVSKLIDVVKKKNKAGVAVKPFQVKNHMWLFV
NCLIENPTFDSQTKENMTLQQKSFGSTCPLNDKFIKQATSCGIVESIMNWVKFKAQSQLN
KKCSSVKHTKIKGVPKLDDANDAGGKNSIGCTLILTEGDSAKTLAVSGLGVVGRDRYGVF
PLRGKMLNVREASHKQIMENAEINNIIKILGLQYKKNYSDPDSLKSLRYGKIMIMTDQDQ
DGSHIKGLLINFIHHNWPSLLRHNFLEEFITPIIKVSFKKTQMSFYSIPEFEAWKISQAN
HKSWKIKYYKGLGTSTSQEAKEYFTDMKRHRIPFKYSGPQDDEAITLAFSKKKVEERKEW
LTNFMNDRRQRREHNLPEDYLYGQSTKFLSYNDFVNKELVLFSNSDNERSLPCLVDGLKP
GQRKVLFCCFKRNDKREVKVAQLAGSVAEMSAYHHGEMSLMMTIIGLAQNFVGSNNLNLL
QPLGQFGTRLHGGKDSASPRYIFTMLSPLARLVFPAMDDNLLKYNFDDNQRVEPEWYIPI
IPTVLVNGAEGIGTGWASRIPNFDIREIISNIHLMLNGEEPLPMLPNYKGFKGTIEQVMD
NQYINSGEVAILDSTTIEISELPVKSWTQAYKENVLEAMLNGSEKVPPLITDYKEYHTDT
TVRFVVKMTAEKLREVEAAGLHKVFKLQNSLTCNSMVLFDHVGSLKKYESVQDILKDFFE
LRMKYYVLRKDWLLGMLGAESAKLSNQARFILEKIQGTLVIENKPKKELIRMLEEMGYDS
DPVKAWKQAQDKNEEEVEDAEEEEREKEDSRGPDYNYLLSMPMWFLTKEKKDELCKQRDA
KLTELNTLKKKAPADLWKEDLAAFSDELERVEAKEKEADTLPVKGAGKGKAVKVKQETLP
TPQGRRVVPRVTSTMKAEANRKAGLKKGEGKRSRKPKDGSLVMKMEFGEDEENMEPDEET
GLSVRLSKKAKTEAKEKAVSKSGKQATLQFKPLAKKSKKNAWSDDEFESLSNSDSEAEEV
VCPRERKERQTKASVKYSLSDSEEEFGDWGKKKKAVLSDDDDTSFALEGNAMSDSDGNSP
ALPPKAPEPKSVQAHELEKGKKVAQSKTVKQTVTKSSSPSDDSAPKAPAQRKTKQAAPKK
AAAAKKPAASKKKAADVKQPSILDALSKSKPASNTAAKKVPSFDSSDSEGDGKVPASKVK
PALKRKQAISDESDSSSDNLMSRLKAKTTAGNKKTKNWDDDDSFQVSGKETAAAAAAAPR
NKPSRSRKPTTYVLNLDSDEDF
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccactgaaggcctttttagagaacaagccggtggaaaaggcaaagaaagat
ccgaagcgactgtcggtggagaggatctaccagaagaagacccagttggagcacattttg
ctcagaccggactcctacataggctctgtagagcctgtcactcagcaaatgtgggtgttt
gatgagggcattggactgaactgccgtgatgtgacttttgtgcccggtctttacaagatt
tttgacgagatccttgtaaatgcagctgacaataagcagagggataaaaacatgtcctgc
attaaagtcaacattgatgttgaaaacaacaccatcagtgtatggaacaatgggaagggg
attcctgtggtggagcacaaggtggagaaggtctttgtgcccgctctcatctttggacag
ctcctcacttccagtaactacaacgatgagcaaaagaaagtcaccggtggacgtaatgga
tacggtgctaagctttgcaatatcttcagtaccaagttcaccgtggagactgcttgtaaa
gagtcaaagaaggttttcaagcagacttggtatgataacatgggcagaacaggcgacgct
aacatcaaaccttttgatggagaagagtacacttgcatcaccttcaggccagacctggcc
aagtttaagatgaacatcctggacaaagatacggtggctctgatgaccaggagggcgtac
gacgtcgcaggatcatccaagggggtcaaggtgttcttcaatggcaagaggctgccggtt
tcaggtttccgcagctacgtgaacatgtacgtgcaggacaaggtggatgagttgggggct
cccctcactgtgatccacgacgttgtcaacgagcgctgggaggtctgcctcaccttgagc
gagaaaggtttccagcaagtcagctttgtcaacagcattgctacgacaaagggaggtaga
cacatcgactacgtggctgaccaggttgttagcaagctcatcgacgtggtgaagaagaag
aataaagctggtgtagctgtcaaacctttccaggtgaagaaccacatgtggctgtttgtt
aattgcctgattgagaacccgacctttgactctcagactaaagagaacatgacactgcag
cagaagagctttgggtccacttgtcctcttaatgacaagttcattaaacaggcaacatct
tgtgggattgtggaaagcatcatgaactgggtgaagttcaaggctcagtctcagctcaac
aagaaatgctcgtctgtgaagcacacaaaaatcaaaggtgtgccaaagctggatgatgct
aacgatgcaggtgggaagaactctattggctgcacgctgatcctcactgagggagactcg
gccaagacgcttgccgtgtctgggctgggggtggtcggaagggaccgttacggcgtgttc
cccctcaggggaaaaatgctcaacgtccgggaggcctcgcacaaacagattatggaaaac
gccgaaatcaacaacatcatcaagatcctcggccttcagtacaagaagaactacagtgac
ccggattccctcaaaagtctgcgctatggcaagatcatgatcatgacagatcaggatcaa
gatggctcccacattaagggattgctgatcaacttcatccaccacaactggccgtcactc
ctccgccataactttctggaagagttcattacacccatcatcaaggtatctttcaagaaa
acacagatgtctttctacagtatccctgaatttgaagcatggaagatcagccaggccaac
cacaaatcctggaaaatcaaatactacaaaggtttgggaaccagcacatcgcaggaagcc
aaggagtacttcactgatatgaagagacacaggatcccattcaagtactctgggcctcag
gacgatgaagctatcacccttgcctttagcaaaaagaaagtggaggagagaaaagagtgg
ctcacaaacttcatgaacgacaggcgccagcgcagggagcacaaccttccagaggattac
ctgtatggccagtcaaccaagttcctgtcctacaatgactttgtcaacaaggagcttgtg
cttttctccaactctgacaatgagaggtcccttccctgcttggtggatggtttgaaaccg
ggtcagcggaaggtgctgttctgttgcttcaagaggaatgacaagcgtgaagtgaaagtt
gctcagctggctggctcagtggctgagatgtcggcataccaccatggggagatgtcccta
atgatgacgatcatcggtttagcccagaactttgtgggaagcaacaacttgaacctgctg
cagcctctgggacagtttgggaccaggctccatggcgggaaagactctgccagccctcga
tacatcttcaccatgctcagcccgttggcccgcctcgtttttccagcaatggacgacaac
ctgctcaaatacaactttgatgataatcagcgcgtggagcccgagtggtacattcccatc
atccccactgtgctggtgaacggcgccgaaggtatcggcacaggctgggccagcaggatc
ccaaactttgatatcagagagatcatcagcaacatccaccttatgctgaacggcgaggaa
cctctgcccatgctccctaattacaaaggcttcaaaggcacaatcgagcaggtgatggac
aaccagtatataaatagtggagaggtggccatccttgattcaacaaccattgagatctct
gaattgcctgtcaaatcgtggacacaggcgtacaaggagaacgtgttggaggcgatgctg
aatgggtcagagaaagttcctcctctgatcacggactacaaagagtatcacactgacacc
acagtgagatttgtggtcaagatgactgcagagaagctgagggaggtggaggctgctggc
ctccataaagtgttcaaactgcagaactccctcacctgcaactctatggttctgtttgac
cacgtgggcagcttgaaaaagtacgagtctgtgcaggatatcctcaaagacttctttgag
ttaaggatgaagtactacgttctgagaaaggactggctgctcggcatgctcggggcagaa
agcgccaagctgtcgaaccaggcccgcttcatcctggagaaaattcagggaaccctggtc
atcgaaaacaagcccaaaaaggaactcattcggatgcttgaagaaatgggctacgactcg
gaccctgttaaagcttggaaacaggctcaggataagaacgaggaggaggtggaggatgca
gaggaggaagaaagagaaaaagaggacagccgcgggcctgactacaactacctgctgagc
atgcccatgtggttcttgaccaaagagaagaaagacgagctgtgcaaacagcgggatgca
aagttaacagaactgaacaccttgaagaaaaaggctccagcagatctgtggaaggaagac
cttgctgccttttcagatgagctggagcgtgttgaggcaaaagaaaaggaggctgatacg
ttgcctgtaaagggagctgggaaaggcaaagctgtgaaggtgaaacaggagactctgccc
acaccacagggccgccgagtggttcctcgcgtcaccagcacaatgaaagctgaagctaac
aggaaggccggtctgaagaaaggagaaggcaagagaagcaggaaacctaaggatggaagt
ctggtgatgaaaatggagtttggcgaggatgaggagaacatggagccagacgaggaaacc
ggtttgtccgtaagactgagcaagaaagccaaaaccgaggccaaagagaaagccgtttca
aagtctggcaagcaggctactctgcagttcaagccccttgccaagaagtcgaagaagaac
gcgtggtcagacgacgagtttgagagtttgtccaacagcgactcggaggcagaggaagtg
gtttgccccagggagcgaaaagaacgtcaaactaaagcctcggttaagtacagcctgtcg
gacagcgaagaagagtttggcgactgggggaagaaaaagaaagcggttctcagtgatgat
gatgacacaagctttgccttagagggcaacgccatgtctgacagtgacgggaactctcca
gccctgccgcccaaagctccagaacctaagtcagtacaagcccatgagctagaaaaaggg
aaaaaagtggcgcagagcaaaactgtcaagcaaactgtaaccaagtcgagctccccgtct
gacgattctgcacccaaggctccagctcaacgtaaaaccaaacaggctgcgccaaagaaa
gctgctgctgcaaagaaaccagctgcttccaaaaagaaggcagcagatgtgaagcagcca
tctatcttggatgccctctccaagtccaaacctgcatccaacaccgctgccaaaaaggtg
ccttcattcgactccagcgactccgagggggacgggaaagttccggcttcaaaggtgaaa
cccgctttgaaaaggaaacaagcgatcagcgacgagtcggacagcagttcggacaacctc
atgtcacggctcaaggccaaaacaactgctgggaacaagaaaaccaagaactgggacgat
gacgacagcttccaggtttcaggcaaagaaacagcagcagcggctgccgcagcaccgcgg
aacaaaccctcacgttcacggaagcctaccacctacgtcctaaacttggactcagatgaa
gacttttaa
DBGET
integrated database retrieval system
