Kryptolebias marmoratus (mangrove rivulus): 108237279
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Entry
108237279 CDS
T05608
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108237279 (rnf40)
Enzymes [BR:
kmr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108237279 (rnf40)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
108237279 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
BRE1
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-RING_5
SpoIIE
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
108237279
NCBI-ProteinID:
XP_017274100
UniProt:
A0A3Q3AIT2
LinkDB
All DBs
Position
LG17:complement(13928802..13943544)
Genome browser
AA seq
1005 aa
AA seq
DB search
MSGAGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNHYWSQLEETVSVLRKCIEPEAPA
ASAPVPPSTPLPIATPVEDNGVGLALPTSAVPPPPLPEAQSEAEQTEPRPQQEEQRENHQ
EEQHPPPLPGSDELMTPTEPPQDSKTDASPPSPPLSENAKGFLATLEQSSEEELSLHLQD
RMQFSKEAIAHLVRVFDRLHGRIDDMCRAIQAAVCQDDNQSDLSLKHTLLEENNRLRDLA
TLLQGRHHKMSLEYNELVDKVTSAETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAM
EQLKSGYSSTGSSGGLAGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAV
RESEKLKMDLRNIPEEVVKETSEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHL
RQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMR
HLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTSDGSDIKKEE
DDDQEEEEEEERRKELERQRAREREREREAERERERERDRERQRSDELKRKDSDTLKMLR
VDLKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDDLRMRVRELEERERK
ESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLL
QQLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEG
VLQSTLAALEKELTVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRT
ARERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDK
ETVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgctgggggaggaaagcgtccctcgggaggggacagtcctcctggcccacca
gagaagaagagcaagaaggaggagaagaccaccaccacactcattgaaccaatacgcata
gctggagtctcctccacggaagaaatggacatgaaagtactccagttcaagaacaagaag
ctgtgtgagcgcctagagcagaggcaggcaatggaggatgagctacgagagaaaattgag
aagctggagaagaggcaagctactgacgacaccaccctcctgattgtcaaccactactgg
tcgcagctggaagagaccgtaagtgttttgcgcaaatgtatcgagccagaagcgccggcg
gcgtctgctcccgtcccgccctcgacgccgctccccatcgccacaccagtggaggacaat
ggtgtcggcctggctctgccgacctccgcagtgccccctcctccattgccagaggcccag
agtgaggctgagcagacagaaccgcggccgcagcaagaggagcaacgggagaaccatcag
gaggagcagcacccgcctccccttcctgggtcagatgagttaatgacaccgacagaacct
ccgcaggattcaaaaacagacgcgtctccaccttcccctcccctgagtgaaaatgcgaag
ggttttttggccacgctggagcagagcagcgaggaggagctgtccttacacctccaggat
cgcatgcagtttagtaaagaagccattgcccatttggtgcgtgtttttgacaggctgcac
ggtcgtatcgatgacatgtgcagggcgattcaggctgcagtatgtcaggacgataaccag
tcggacctcagtctgaaacacacgctgctggaggagaacaaccgtctgcgagatctcgcc
accctgctgcagggacgacaccacaagatgtccctggagtacaacgagttggtggacaaa
gtgaccagcgcagaaacaaaggtgtctgagatggagacaacggtggaggaccttcagtgg
gacatagagaaactccgcaacagggagcagaagctcaacaaacacctggcagaagccatg
gagcagctaaaatctggctacagcagcactggcagctcaggagggctagctggaggtcag
ataaccctgaacattcagaagtttgagagtctcaacgcagagctggagcacaaccaggag
ttggccaacagccgcatggcagagttggagaagctgcaggtggagctccaggaggctgtg
agggagagtgagaagctcaagatggacctgcgcaatatcccagaagaggttgtgaaagag
acctccgagtacaaatgtctgcagtctcaattttctctgctgtacaacgaatctcttggg
gttaaaactcagctggatgaggctcgggctctcctgctgactgcgaagaacgctcatctt
cgtcagattgagcatatggagagcgacgagctgtcccttcagaagaagctgaggaccgag
gtcatccagctggaggacaccttggcccaggtgcgcaaagagtacgagatgttgcgcatc
gagttcgagcagaacctggcggccaatgaacaagcaggaccaatcaacagggagatgcga
cacctaatcagcagccttcaaaaccacaacttgcagctgaaaggcgacgtgcagcgctac
aagaggaagctgcgtgaaacacagatggagatcaataaactgcggtgccagagtggcgac
acgggggttttgatcctcgaggagacgacgagcgacggaagcgacatcaaaaaggaggag
gacgacgaccaggaggaggaggaggaggaggagaggaggaaggagctggagaggcagcgg
gcccgagagcgggagagggagcgagaggcggagcgcgagcgggagagggagcgcgacagg
gagaggcagcgcagcgacgagctgaagaggaaggactcggacacgctgaagatgctcaga
gtggatctcaagaaagcccaggagtcccagaaggagatgaagctcctgttggacatgtat
aaatcggctccaaaggagcaacgggacaaagtgcagcttatggcagctgagcgcaaatct
aaagcggaggtggacgacctgaggatgcgcgtgcgggagctggaggagagggagaggaag
gagagcaagaagttggccgacgaagacgccctcaggaagattcgtgtcgccgaagagacg
atcgagcacctgcagaagaagctggctgccaccaagcaggaggaggaggccctgctgagt
gagatggacgtaacgggccaggccttcgaagacatgcaggagcagaacagccggctgctg
cagcagctccgggagaaggacgacgccaacttcaagctgatgagcgagcgaatcaaatcc
aaccagatctacaagctgctgaaggaggagaaggaggagctggccgaccaagtgctcacc
ttcaaaacccaggtggatgctcagctgctggtcgtgcagaagctggaggagaaagaggga
gtcctccagagcacgctggctgctttggaaaaggagctgactgttcgaacacaggccctg
gagctcaacaagaggaaggcggtggaggccgcgcagctggcagaggacctgaaggtgcag
ctggagcacacgcaggccaagctgaaggagatccaggtctccgtggctgaaaaccgcacc
gcccgagagagggagagcagcaacctgaaacgagcgcaggaggatctgtccaggctgagg
cggaagctggagaagcagaagaaggtggaggtgtactcggacgcagacgagatcctgcag
gaggagatcaatcagtacaaggccaagctgcgctgcccctgctgcaacacgcgagacaag
gagaccgttctcaccaagtgtttccacgtgttctgctacgagtgcctgaagatgcgctac
gacacccggcagaggaagtgccccaagtgcaactgtgcctttggagccaatgactttcac
cgcatctacatcacctaa
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