Kryptolebias marmoratus (mangrove rivulus): 108237307
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Entry
108237307 CDS
T05608
Symbol
rbm25a
Name
(RefSeq) RNA-binding protein 25
KO
K12822
RNA-binding protein 25
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108237307 (rbm25a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmr03041
]
108237307 (rbm25a)
Spliceosome [BR:
kmr03041
]
Complex A
U1 snRNP components
U1 related factors
108237307 (rbm25a)
Complex B
108237307 (rbm25a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
108237307
NCBI-ProteinID:
XP_017274127
UniProt:
A0A3Q3BBA0
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Position
LG10:complement(6761512..6774970)
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AA seq
869 aa
AA seq
DB search
MSYTPPMNRPQIGIPLPPGIPPPQYAGFAPPVPPGTPMIPVHMGVVTPAPTVLVPTTVAL
VQNPVSIKRDPSIRSKDPEDGGGPTTTVFVGNISEKASDMLVRQLLAKCGIVLSWKRVQG
ASGKLQAFGFCEYKEPESTLRALRLLHELLLGDRKLLVKVDAKTKGQLDEWKAKKRSANG
GTTDVSKNDEGGGEEVLDEETLRRDQVVKGAIDVLIREYSSELNAPSQDSDGQTRNKKRK
EKKEEDINAMELEDDKRDLISREISKFRDTHKKLEEEKGKKEKERLEIERERRERDKERE
RERERRDREKEKEREREKEKERERDRERERERDREREKTKERERSRDISEARSKSRERTR
EDKKRDRDEDEEDIYERRRLERRLRDKEAAYQERLKNWEIREKKKAREYSKETEREDERR
REMMKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEIEMDERDRKREKEELEEI
RQRLLAEGHPDPDAELQRIEEEAERRRQLLLNLEPEEDVSKEKNQRDRDRDRERNRGRER
DRERERERERDRDRDRERDRDRERERERDRDRERERDSDRDRERDKRGSERPVEPKSRGP
QQHSDEDVDEGQGDDYRNGEDSQETKPQLKPIMRPINTAPSVSSASGNVTPNTPGVESPC
GIIIPGENTPDVQPLDEHRPKIGLSLKLGATNSPSQLSAVKRKKLAAVDSVFNKFDDEEA
DEQPRKRKLVPLDYGDDDKNLGLDGADISAPKSSINTEEKHKHIKSLIEKIPTSRPELFS
YSLDWAMVDSTLMDRRIRPWINKKIIEYIGEEEPTLVDFVCSKIMAHSSPQGILDDVAMV
LDEEAEVFIVKMWRLLIYETEAKKIGLVK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacactcctccgatgaaccgcccgcagatcgggatcccgctgccccccgggata
ccccctccccagtatgcaggctttgcccctccagtcccgccaggtactcccatgatcccg
gtccacatgggtgtcgtgacccctgcgcccacagttctcgtcccaaccaccgtggctctg
gtgcagaaccctgttagtataaagagagaccccagcatcagaagcaaggacccggaggac
ggcgggggccccaccaccaccgtgtttgtggggaacatctctgaaaaggcttcggacatg
ttggtcaggcagcttctagcgaaatgtggtattgttctaagctggaaaagggttcaaggt
gcctctgggaaacttcaagcttttgggttctgtgaatataaggagcctgagtccacactg
cgagccctcagacttctacacgagctgctcttaggcgataggaagttgttggtgaaggta
gacgccaagaccaagggtcagctggatgagtggaaggccaagaagaggagtgccaatggg
ggaaccacagacgtgtccaaaaacgacgagggaggcggcgaggaggtccttgatgaagaa
accctgcgccgggaccaggttgtgaagggggcgatagatgtccttattcgagagtactcg
agtgagctgaacgctccctcacaggattccgacggccagacgcgcaacaagaagcgaaaa
gagaagaaagaggaggatatcaatgccatggagttggaagatgacaagagagaccttatt
tccagagagatcagtaaattccgggacacacacaagaaactggaagaggagaaagggaag
aaggaaaaggagcgcctggagatcgagagagagaggagggagagggacaaagagcgagag
cgagagagagagcgccgcgaccgcgagaaagagaaggagagggagcgggagaaggaaaag
gagcgggagagagaccgagagcgcgaacgcgagagagaccgagagcgcgagaagactaag
gagcgggagaggagtcgagacatcagtgaagctcgcagcaagtcgagagagagaaccaga
gaggataaaaaacgagaccgcgatgaagatgaggaagacatctatgaacggcggagactc
gagaggaggttgagagacaaagaggctgcttaccaagaacgtctcaaaaactgggagatt
cgagagaagaagaaggctcgtgagtacagcaaagaaacagagagggaggatgagaggcgg
cgtgaaatgatgaaagaagccaaaagactgaaagaattccttgaagattacgatgatgac
agggatgatccaaagtactacaggggcagtgctctgcagaagcgcctccgggaccgagaa
aaggagatcgaaatggatgagcgagaccggaagagagagaaggaggagctggaagagatc
cggcaaagacttcttgctgagggtcaccctgacccagatgctgagctgcagaggattgag
gaggaagcggagcgaaggcgacagctgctgctgaaccttgaacctgaggaggatgtgagc
aaggaaaaaaatcagagagatagggaccgggatcgtgaacggaaccggggacgggaacga
gatcgggaacgggaacgagaacgagaacgagaccgagatcgagaccgggaacgagatcga
gaccgggaacgggaacgggaacgggatcgagaccgagaacgagaacgggacagcgaccgt
gatcgagaacgtgataagagagggtcagagaggcccgtagaaccaaagtcccgggggcct
cagcagcattctgatgaggatgtagatgaagggcagggggatgactaccgcaacggtgag
gactcacaagagaccaagcctcagctcaagcccatcatgcgtccaatcaatactgctccc
tcagtttcttctgccagcgggaacgtgactccaaacacgcctggtgtcgaatctccctgc
ggcataatcattccaggagagaacactcctgacgtccagcctttagatgaacaccggccc
aaaattggtctcagtctcaagctaggtgcgaccaacagtcccagtcagctcagcgccgtg
aagcggaagaagctggcagcagtcgacagtgttttcaacaagttcgacgacgaggaagcc
gatgagcagcctcgcaaaaggaaattggttccactggactacggcgacgacgacaagaat
cttgggctcgacggagctgatatttccgcccccaaaagcagcatcaacaccgaggagaaa
cacaaacacattaagagccttatagagaagatccccacttccaggcctgagctcttctcg
tactccttggactgggctatggttgattcgactctgatggatcgccgtattagaccgtgg
attaataagaagattattgaatacattggcgaggaggaacccactctggttgattttgtc
tgttctaagataatggcgcacagcagtcctcagggtatcctcgatgatgttgctatggtt
ctggatgaagaagcggaggtcttcatagtgaaaatgtggaggctattgatttatgaaacg
gaagccaagaagatcggactggtgaaataa
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