Kryptolebias marmoratus (mangrove rivulus): 108237312
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Entry
108237312 CDS
T05608
Symbol
si:dkey-127k13.1
Name
(RefSeq) PWWP domain-containing DNA repair factor 3A
KO
K23386
PWWP domain-containing DNA repair factor 3
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kmr03400
]
108237312 (si:dkey-127k13.1)
DNA repair and recombination proteins [BR:
kmr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
108237312 (si:dkey-127k13.1)
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GFIT
Motif
Pfam:
PWP3A-B_C
MUM1-like_PWWP
PWWP
Rad9_Rad53_bind
PTS_IIA
DUF4537
Motif
Other DBs
NCBI-GeneID:
108237312
NCBI-ProteinID:
XP_017274133
UniProt:
A0A3Q3BB68
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Position
LG15:11998925..12004784
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AA seq
564 aa
AA seq
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MKGGRRQTRKREPKVSKEDVVTNSIPSPAAVESVVASSDDLSTSIQSTPRRGKRQSGRIR
NVSLTSTPVHSSAADHVSNISHLSPQINDSQQEHTVIITKPKMSKANSPPSNSKSQGRRR
ATCSSKPRQVAQDVAKEQTELNGATVKRQRGRPRKVETVNLKDETTAQSIKRSRPRFELQ
KLDASEQDESLLSSDLSIELSHYEEQLPCLSFQKDENSDEEEEEELPSFLMQDKKPSSIT
DGAFVWCKFRNYPYWPAWVKSVNRKQKKASIIFVDHAFTGIQRNKGFALALKSMKPFDCE
EADELMRKAKETYDTAVTWSLELIEDYRIRIACGSFSGSFIEYFNHDMSYPVRRKFPQTA
SERLTIATDTIIEDLCDDHNEYRLIEKEEDVCTSTKRLLPDRTHAAHNRANEKLVHFIVK
QRMVEAHLLAVIGGQQQSRWLHAFLSAKRRRVVNTYLEDDQQLDQVYWYLDELYATTVAK
SPCLAEVKQMERVPFVLDVLLPEAIIYAIAGVDNVSVKKAEEKYLKGRCISNRERQEFDL
MIERQMKRKRCQNTALGLNSDPIS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggacgtcgtcaaacaaggaaaagagaacccaaggtgtccaaagaggatgtc
gtcacgaacagtatcccgtctcccgctgcagtggaatcagttgttgcttcaagcgatgat
ctgtctacttccatacaaagcacaccaagaagaggcaagagacaaagtggacggatacga
aacgtcagcctgacttccacgccggtccacagctccgccgctgaccatgtgtccaacatt
tcacacctgtctcctcaaataaatgactcgcagcaggagcacacagttatcatcactaag
ccaaagatgtcgaaggcaaattcaccgccctccaactcaaaatctcaaggcagaagaagg
gcgacttgttcttctaagccaagacaagttgcacaagacgtagccaaggagcaaaccgag
cttaacggtgctacagttaagcgacaacgtgggaggccacggaaggtcgaaaccgtaaac
ttaaaagacgaaaccactgctcagtcgatcaaacgctcaagaccaagatttgagctgcag
aagcttgatgcatcagagcaagatgagtctctgctgtcttcagatctgtctatagagctg
agtcactatgaagagcagctgccctgtttgtcctttcagaaagatgagaacagtgatgag
gaggaggaggaggaactaccaagtttcttaatgcaggataaaaagccttcatctatcaca
gacggagcgtttgtgtggtgcaaattcaggaattatccatactggcctgcatgggtaaaa
agcgtgaaccgtaaacaaaaaaaagccagcatcatttttgtagaccatgccttcacaggg
attcagagaaacaaagggtttgctctggcgttgaaatccatgaagccgttcgactgtgag
gaagcagatgagttgatgcgtaaagccaaagaaacatatgacactgctgttacatggtcc
ttggaacttatcgaggactacagaatccggattgcatgtggctcattttccggctccttc
attgagtatttcaatcatgacatgagctacccagtgaggaggaagtttccgcagacggcc
tccgagagactaactatagccactgatactataattgaggacctatgtgatgatcacaac
gagtatcgcctcattgaaaaggaagaagatgtctgcacgagcacaaagaggctgctgcct
gaccggacccatgcagcccataaccgtgccaatgagaagctcgtacatttcattgtcaag
cagcggatggtggaagcccaccttctggctgtgatcggtgggcagcagcagtccagatgg
cttcacgcttttctgagtgccaagcggagacgggtggtgaacacgtacctggaagatgac
cagcagctggaccaagtctactggtacctggacgagctctacgccaccactgtggctaag
tccccatgcctcgctgaggtgaaacaaatggagcgtgtcccttttgttctggatgtcctt
ctgcctgaggctatcatttatgccattgctggggtggacaatgtttcagtgaaaaaggca
gaagaaaagtaccttaaaggacgatgtatcagtaacagagaaaggcaagagtttgacttg
atgatagaacggcaaatgaagaggaagcggtgtcagaatacagcacttgggttgaactca
gacccaatcagttag
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