Kryptolebias marmoratus (mangrove rivulus): 108237314
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Entry
108237314 CDS
T05608
Symbol
psen1
Name
(RefSeq) presenilin-1 isoform X3
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04310
Wnt signaling pathway
kmr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108237314 (psen1)
04330 Notch signaling pathway
108237314 (psen1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
kmr01002
]
108237314 (psen1)
Peptidases and inhibitors [BR:
kmr01002
]
Aspartic peptidases
Family A22: presenilin family
108237314 (psen1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
108237314
NCBI-ProteinID:
XP_017274166
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All DBs
Position
LG10:6472454..6488378
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AA seq
483 aa
AA seq
DB search
MANNAEDVENNMQDQQESNTAPEPIQQQQEATGTRVRSRGGSGPGGGDSEDGGGGSGSSP
EQNGQPPTSRPSRGVENEEDEDEEMTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTQ
NVGQGMIYTPFPEKTDTVAERAVNSILNATIMITVIIVMTFVLVLLYKYRCYKVIHGWLF
LSSLLLLFFFSYIYLTEVFKTYNVAMDYFTLAIIIWNFGVVGMMCIHWKGPLRLQQAYLI
MISALMALVFIKYLPEWTAWLILVVISVYDLLAVLCPIGPLRILVETAQERNEPIFPALI
YSSTMVWLVNMADTDRPKRSSEEAGSPQQETQEAAVASPVPSSPSQDNGGFTSSWVRQQQ
HQLGPLQSTEETRREIQQMPSARPPVEDDEEERGVKLGLGDFIFYSMLVGKASVTAGGDW
NTTLACFVAILIGLCLTLLLLAIFKKALPALPISIFFGLVFYFATGNLVRPFMDKLALHQ
FYI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaacgcagaagatgttgaaaacaatatgcaggaccaacaagagtccaataca
gccccagaacccatccagcaacaacaggaggctacggggaccagagtgcggtccagggga
ggctcaggacctggaggaggagatagtgaagacggtggaggtggcagtggaagcagcccg
gagcagaacgggcagccccccacctctcgtccttctcgaggggtggagaatgaagaggat
gaggatgaggagatgacccttaaatatggggccaagcacgtcatcatgctctttgttcct
gtgacgctctgcatggtggttgttgtggcgaccataaagtctgtcagtttctacacccag
aatgttggacagggaatgatctacacaccattccctgaaaaaacggacacagtcgctgag
agagccgtcaactctatcctgaatgccaccatcatgattactgtcatcatcgttatgact
ttcgtgctggtgcttttgtacaagtaccgctgttataaggtgatccatggctggctcttc
ctctcctccctcctcttgctcttcttcttttcctacatctacctcacagaggttttcaaa
acctacaatgtggcaatggactacttcaccctggcaataataatttggaactttggagtg
gtgggcatgatgtgtattcactggaagggacctctgcggctccagcaggcctacctcatc
atgatcagtgcgctaatggccctggttttcatcaagtacctgccagagtggaccgcctgg
ctcatattagtagtcatatctgtctatgatctgttggcagtgctctgtcctatagggcct
ctgaggatccttgttgagacggcccaggagagaaatgaacccatctttccagctcttatc
tactcatctacgatggtctggcttgtgaacatggccgacactgacaggccaaagaggagc
tcagaagaagcaggttcaccccaacaggagacacaagaagcagccgtggcatctccagtg
ccttcgagtccatcacaggataatggcggcttcacgtcctcctgggtcagacagcagcag
caccagctggggccacttcagtccactgaggagaccagacgtgagatccaacagatgccc
tctgctcgtcccccagttgaagacgatgaggaggagaggggtgtgaagctggggctcgga
gatttcatcttctacagcatgctggtggggaaggcctcagtcacggccggcggtgactgg
aacaccacgctcgcctgcttcgtagccatcctcattggcttatgtctgaccctcctcctc
ctcgccatcttcaagaaagctctgcccgctctgcccatttctattttctttgggctcgtc
ttttactttgccacaggtaatttggttcggcccttcatggacaagctggcgctacaccag
ttctacatttag
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