Kryptolebias marmoratus (mangrove rivulus): 108237480
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Entry
108237480 CDS
T05608
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 2
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
kmr04121
]
108237480 (lrrc29)
Ubiquitin system [BR:
kmr04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
108237480 (lrrc29)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
F-box
F-box_5
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
108237480
NCBI-ProteinID:
XP_024862320
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All DBs
Position
LG11:20565566..20573252
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AA seq
655 aa
AA seq
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MEDSDGEDVKETPELPQEIIVYILSFLHASDRKEASLVCHSWYTASQDLRFQKNVTFSFP
ASASSLELVRGLSRKSRCSLKISQLDGFSISRSLLLEVGMCLGSKVESLALPGSSVTEAS
LLALLPRLTSLRRLDLRGLDSLFMSGAFLSREEHRRQVRSALSGLKELDLSDLRYLSDLT
FNRLTGCTPHLCRLSLAGCHIAFEFDPYQGCPVGAVEDSSALLSLRNLRRLLTEQRSTLV
GLDISRTSITPESLRTVAQVQGLVLEELYLQGCKELTDYSVEILVKHQPSLLKLDISGCT
ELTSRSVEAAARSLKSLTHLSLSRDWRITEKGLADLLSVSSLASLDLSECPHISGTEMVK
GLKGSKAGRRNVEMLNLKSCTYVRDLAVFSLTQLLGDSLRELDLTSCVNVTDLSVCAIAT
YLQNLVILRLGWCKEITDWGLLGMVQKNQSEPDDETGDQGPRFTRTFGNMGFFKPPRMPF
EERPKMVTQNDLQQFKQKAGASLLALKRLQELDLSACAKLTDSSITQVVRHPELQRLSLS
MLPEITDASLASVGRHCRSLTSLALSQCPGVTDRSVAQAVPYLHRLQHLHLSCCNNITDR
SLFLLMQHCQRLKTVDVSRCKNISMTAVDLLQSQLPFLENVHHRLIGGADVTLSD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagcgatggggaggacgttaaagaaacacctgagctgccacaggagatcata
gtttacatcctgagttttctccacgcttcagacaggaaggaggcctcgctggtctgccac
agctggtacaccgccagccaggacctgcgcttccagaagaacgtcaccttcagcttcccg
gcttcagcctcatccctggagctggtcaggggtctgtccaggaagtcccgctgcagcctg
aagattagccagctggatggcttcagtatttccagatcactcctcctggaggtgggtatg
tgtcttggctccaaggtggagagcttggcccttcctggtagcagcgtcaccgaggcctcc
ctgctggctctcctccctcgcctcacctccctgcgcaggctggacctcagaggcctggac
agtctcttcatgtctggagcctttctgtccagggaggagcacaggcggcaggtcaggtcg
gctctgagcggtctgaaggagctggatctgtcagacctgcgttacctgtccgacctcacc
ttcaaccgcctcaccggctgcacgccgcacctctgccgcctctcgctggccggctgccac
atagcttttgagtttgacccgtaccaagggtgcccggtgggcgccgtggaggactcctcg
gctcttctgtcactcaggaacctgaggaggctgctgacagagcagaggtccaccctggta
ggtctggacatcagcaggacctccatcacccccgagtcgctgcgcacagtcgcacaggtt
cagggtttggtgttggaggagctgtatcttcagggctgcaaagagctgaccgactactcg
gtggagattctggtgaagcaccagccaagcctcctgaaactggacatcagcggctgcacc
gagctgaccagcaggtctgtggaggctgcggctcgaagcctgaagtctctgacgcacctc
tctttgtcacgcgactggaggatcacagaaaaaggtctcgcagacctgctgtccgtgtcg
tccctggcgtctctggatctatccgaatgtccacacatcagtgggacggagatggtgaaa
ggcctgaagggatccaaggctggcagaagaaatgtggagatgctgaacctgaagagctgc
acctatgtcagggatcttgcagttttctcgctcacgcagctccttggggattctcttcgt
gagttagacctgacgtcgtgcgtcaacgtgaccgacctgtccgtgtgcgccatcgccacc
tacctgcagaatctggtaatcctgcggctcggctggtgtaaagaaatcactgactggggt
ctcctcgggatggtgcagaaaaaccaaagtgaacccgacgacgagacgggagaccaaggt
ccgaggttcacccggacgtttggcaacatgggcttctttaaaccccctcggatgcctttt
gaggagcgacccaagatggtgacgcagaacgacctgcagcagttcaaacaaaaagccgga
gcgtcgcttttagctctgaaacggctgcaggagctggacctctcggcctgcgccaagctc
actgacagcagcatcacacaggtggtgcgccaccctgagctccagcgtctgtcgctctcc
atgctgccagaaatcactgacgccagcttggcgtcggtgggccggcactgccgcagcctc
accagcctggcgctcagccagtgtccaggcgtcaccgaccgcagcgtggctcaggctgtg
ccgtacctccaccggctgcagcacctccacctgtcctgctgcaacaacatcaccgacagg
tccctgttcctcctgatgcagcactgccagcgcctgaaaacggtcgacgtgtcgaggtgc
aaaaacatctccatgacggcggtggatctcctccagtcacagctgccgtttctggaaaat
gttcatcacagactcataggtggggctgacgtgacgctgagcgactga
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