Kryptolebias marmoratus (mangrove rivulus): 108237509
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Entry
108237509 CDS
T05608
Symbol
sox11a
Name
(RefSeq) transcription factor SOX-11a
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kmr03000
]
108237509 (sox11a)
Transcription factors [BR:
kmr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108237509 (sox11a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOG2
Motif
Other DBs
NCBI-GeneID:
108237509
NCBI-ProteinID:
XP_017274467
UniProt:
A0A3Q3AGD9
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Position
LG10:11801859..11804941
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AA seq
374 aa
AA seq
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MVQHTDTSETDGSMSREATDSEESEFMACSPVAINPDWCKTATGHIKRPMNAFMVWSKIE
RRKIMEQSPDMHNAEISKRLGKRWKMLKDSEKIPFIREAERLRLKHMADYPDYKYRPKKK
PKLDPSKSSAPSPEKCAKMAKAPSKKCSKIKTKSGSKTSHGYAEDCVFPGFKVAKTVKSE
LSDEEDDDDYEEEYRMGIKAGEEERLRPYGVAKVPASPTLSSSAESEGASMYEEVRSNNR
LFYNLKHMSKQGALHAASVSPASSRSVSTSSSSSSSSSSSSSSSSSSSSSSGEDADDLLF
DFSLNFAPSAPGSELGNANSGNLSLSLVDKDLDSFSEGSLGSHFEFPDYCTPELSEMIAG
DWLEANFSDLVFTY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcacacggacaccagcgagacggatgggagcatgtccagagaagccaccgac
tcggaggagagtgaatttatggcgtgcagtcccgtggcgataaacccggactggtgcaag
acggccaccggtcacatcaagagacccatgaacgcgtttatggtctggtccaagatcgag
aggagaaagatcatggagcagtcgccggacatgcacaacgcggagatttccaagcgcctg
gggaagcggtggaagatgctgaaggacagcgagaagatcccgttcatcagagaggccgag
cggctgcggctaaaacacatggccgactaccccgactacaagtacagacccaagaaaaaa
ccaaagctcgacccttccaagtcgtccgcgccgtcgccggagaagtgcgccaaaatggcc
aaggcccccagcaagaagtgctccaagatcaagaccaagagcggctccaagacctctcac
ggctacgcggaggactgcgtgtttcccggcttcaaagttgccaagactgtgaaaagtgag
ctctcggacgaggaggacgacgacgactacgaggaggagtacaggatggggattaaagcc
ggggaggaggagcgcctgaggccgtacggcgtggccaaagttcccgcgagcccaactttg
agctcctcggctgagtccgagggggcgagcatgtacgaggaggtgcggagcaacaacaga
ctgttttacaacctcaaacacatgtccaagcagggcgcgctgcacgctgcttccgtctca
ccagcatcctcccggtcggtctccacgtcctcctcctcctcctcctcctcttcctcctcc
tcctccagcagcagcagcagcagctcctcatccggggaggacgcggacgatttgctgttt
gactttagtttgaatttcgctccgagcgctccaggctcggagctgggcaacgctaattca
ggaaacctctccctgtctcttgtggataaggacctggactctttcagcgagggcagcctg
ggctcccactttgaattcccagactactgcacgccagaactcagcgagatgattgccgga
gactggctggaggcgaacttttccgacttggtcttcacatactga
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