Kryptolebias marmoratus (mangrove rivulus): 108237539
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Entry
108237539 CDS
T05608
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
kmr04515
]
108237539
Cell adhesion molecules [BR:
kmr04515
]
Cadherins
Cadherin related
108237539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Cadherin_CELSR2_9th
Ig_Shg
Cadherin_pro
EGF
hEGF
RET_CLD1
EGF_2
EGF_Teneurin
Big_9
EGF_Hmr-1
Cadherin_4
EGF_3
Motif
Other DBs
NCBI-GeneID:
108237539
NCBI-ProteinID:
XP_017274519
LinkDB
All DBs
Position
LG11:complement(22590005..22702197)
Genome browser
AA seq
2913 aa
AA seq
DB search
MMWGVLLCCLLTLAAGYQAQDQLPFFHGHIFENSPAASKVSGLSIPVKRINAQKWCQLSG
MHFKLHGNGSEDFRVFAHHKRGNVLLKTSRVLDREARSEYLLSVSLCCQTCALESSVIEV
ASVKVDVLDTNDHEPTFVRADSIRISLDDTTALRSAVYKLQAADGDSGRNAELTYISIPK
NGTFYVVPKTGEVLLVDSILGFPSTIRFYVYARDHGWPSLASKAVLVTVDPKRWATRPAE
KSEPVRTGRFPRALLESGTVMTLNVSEDAGIGSVIMSLNPTRFQSAAYELIYPELESSPV
SVGRDSGDIAITRRLDRETEPLVELTVKIQDKRGPDWYLNKVKLKITDVNDNIPEWNMKP
YPYLAVVSPEAPAGSFVYQLEAIDGDEGKSGEVEYFLSDGGDGCFAVDKKTGQVVTTGLV
LQRDREYLLSVVAIDGVGSRSAPAMLSVVAGARAPQFTNTSYAISIPENTPEGQPFLVVL
AISFQKQQISYSLLINPSSLFSIQQETGEISLTRTLDYENDQRRYLLMVRANEEPGSLSM
ATEVQVLITDENDCVPEFLQSIYSVDGVPETVTTATSLLQVLATDCDTGLNAELTYYTLS
QDFTISPHGTVFPARRLDYERPNHLYEFVVMAVDGGDEPHSGTTTVRVRMANVNDEAPEF
SQPVYRTFVSEDAGPNTLVATVLAKDPDGDSIIYSITAGNEEGNFVIDNQKGLIRLRSAP
LPKLQGLEYVLNVTATDDNASGGPHALTSTARVIVGVDDVNNNKPIFEECQQYREQASVL
ENQPAGTFVLQVHAVDADEGANGKVKYGLMHRDSAMPAFRIHPDSGVIVTARRFDRERQR
EYSITVTATDWAEEPLIGICQLTVQILDQNDNSPKFENLRYEYFLREDTLVGTSFLRVAA
HDDDFGTNAAITYSMSLEQPEYLRVNPVTGWVYVNQPISQRTYITRDITATDGGNRSTSV
ELAVTITNVKNQPPQWEKQSYNVVIPENTARDTPIVTVKATSQLGDPRVTYNLEDGMVPE
TNMPVRFYLSPNREDGSASILVSEPLDYETTPFFSLQVRAQNVAAVPLAAFTRVYVNITD
VNDNVPFFTSSIYEASVTEGAQVGTSVLQVSAHDKDLGLNGEITYSLLSDSSGDHNFFRI
DPKDGIICTEAVFDREARSSYLLEVQSEDGQESARPGKNKQPNTDTAYVRVFISDVNDNK
PVFAQRLYEVRVDENADVGLAIVTVGANDEDEGANAKLRYQITSGNEGGAFDIEPEVGTI
FIAQSLDYEKQKRYKLLVLASDGKWEDYAAVVVNVVNKNDEAPVFSMNKYYGSVTEELDG
SPVFVLQVTATDPDKDADQGAIRYSIHGQGAESHFMINDITGEMYAQRTMDREERAVWRF
VVMATDEEGEGLTGFTDVIINVWDINDNAPTFLCSPDNCHSNVAENSPPGTIVVEMTAVD
LDDAAVGQNAILTYRITENAHNLNNAELFSIDSSTGTISVSAEGLDRELADSHHVVVEAK
DGGGMTGTATVTIVVTDINDHVPKFKEDWCGARVPESTHEDASLLELSAVDPDDGTYGQL
AFSVVAGDSEQQFYMVSNRIKQKGTLRLKKKVDFEQPAERRFNLTIMVEDSDFSSVIHCL
ILVEDENDNTPVFTPSSHLLSPLPEDITVGTSVIQVEATDPDSGLNGDVLYSILSNSDPF
EHFTVSRAGIVTVTKPLDRETVAGYELVVMATDRGTPALTGSVTVHLPLLDMNDNGPELE
TVYTPVLWENGPAPQVVWLNRSSTLLHVVDRDSPEHGPPFILSLPSVFSADFHLQDHGNG
SGTLTTLRRFDRERQSEFHLPVIMIDSGVPPITATNTLTITIGDHNDNAHQAGEKDVYVH
SHKGRIGNAALGKVYAPDPDDWDNKTYSLETSAAKYFSLNQSSGVLSLRQNPPAGSYWLR
VGVSDGVWPDMISGVRVHVRELDEKAILSSASLRLTGVTAREFIDSSVEGKSRLEAFWDF
LSETLSVRPGSINIFSLADREEKTVDVYFYVLTDNGYLRPEKLHSVLAAHKRELQPLLHA
SVSQVQVDECVHADCKTSGGCYTQLSISDSPTLIDSGALSLVSVKVTSSAVCGCAAREMT
HRPCSSYPSNPCRNGGTCIDTQNGYRCRCPPQLEGPDCQQTRLSFLGNGYAWFPPIRPCS
DSHLSLEFMTEEDDGLLLYAGPLATLLPGDTEDYIAIELIGGMPSLKINHGSGTLVLQLT
NVGVGDRRWHRLDVKSNSKEVRFTLDRCSSAIVMEAEGVEAWAMTEDRSSCEIRGVTPNR
DRYLNGSHVLQLGGINENISYEYPQLQHKHYSGCIRNLLVDSKLYDLGSPAESSNTLLGC
SLIDNHCADVEQLSSCGKRGSCHGERGSFSCLCEKGFTGPQCNQLAPEFSFDGRSHIQLQ
LEWSLPTRLTRVQIGIRTRAQAGVILSLLSQEQSEYLRLEDVQGLLAVFYNLGDGDYNVT
LPYYRLDDGEWHEVELDRYGREFTLRLDGGGGRLEVTASPGQSQEIIIDPSVVMLGNSFP
SGHNRSFLGCLRDVRLNGRPIPLDQEQRAEGLQVVTAQGVSVGCSSDACRKHHCSPPLVC
VDLWRQHECRCPPGHMTRESSSGRVCIYTLCASRPCRHGTCVAHSPSRYSCLCSEGYRGR
HCEVALAVFHSEDSNSLSLSSMFAISICVMAFLVLMLGLFLYSCWRRHKGLKEGVYHVSA
HHGEWEDIRENVLNYDEEGGGEQDQNAFNMVELQRSLQPSPAQSLRYSYPQNINCYPQTK
LPQDNNKKVMLNGNGNAAIALRLAIPPSEAETLSSPLTFRRSQRAFSFSSQDLARYLCEV
MRDMEHTEELGTMTTPRRPNGKERSLSSVHSLSSLDASQGSEVRLHAAHITRMDTFKTLR
AVVCDLRGDTKAPEGQRDKLKESKGQMNCEKNM
NT seq
8742 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggggtgttttgctgtgctgccttctaacattagcagctggatatcaagcccag
gatcaactgcctttctttcacggacatatttttgagaactcgccggcggcttccaaagtg
agcggacttagcattccggtgaagcgcatcaacgcgcaaaaatggtgtcagctctccgga
atgcacttcaaactgcacggaaacggcagcgaggatttccgcgttttcgcccaccacaaa
cgagggaatgtgttactgaaaacttccagggttttggacagagaagctcgctcggagtat
ctgctgagtgtaagtctgtgctgccagacgtgtgcgttggaatcctctgtcatcgaggtc
gcgtcggtaaaggtggacgttctggacaccaacgaccacgagccgacctttgtccgcgca
gacagcatccgcataagtttggatgacaccaccgctctgcgcagtgctgtctacaagctg
caggctgccgatggagacagcggaaggaacgcagagttgacgtacatctccatccccaaa
aacggcactttctatgtagtcccgaaaacaggcgaagttttgctggttgactccatcctg
ggttttccctccacaatcaggttctatgtttatgccagagatcacggctggccctctctg
gccagtaaagccgtgctggtcactgttgatccaaagcggtgggcaacgcgtccggctgaa
aaatcggagccagtgaggaccggacggttcccgagggcgctcctcgagtcaggcaccgtg
atgaccctgaacgtgtctgaagatgcaggcatcggctcggtcataatgagcttgaatccc
accaggtttcagtcagccgcctacgagctcatttacccggaattggagagctccccggtg
tcggttggccgcgacagtggagatatcgccataacccggaggctggacagggagacagaa
cctttggtggagcttactgttaagattcaagacaaacgaggcccagactggtacctgaac
aaggtgaagctgaagatcaccgacgttaacgacaacatccctgagtggaatatgaagcca
tacccctacctagctgttgtgtctcctgaggcccctgcaggatcatttgtctaccagcta
gaggctattgatggggatgagggcaaaagtggagaagtggaatacttcttgtcagacggc
ggcgacggctgctttgctgtagacaaaaagacaggccaggtggtgaccacagggctggtg
cttcagagagacagagagtacctgttaagcgtggtggccattgatggtgtgggaagtcgc
agcgcacctgccatgctctctgtggtggcaggggccagagcgccacagttcaccaacacc
agctacgcaatctccataccagagaacacacctgaaggacagcccttccttgtagtgcta
gctatttccttccagaagcagcaaatcagctacagcctgctgatcaatcccagcagcctt
ttcagcattcagcaggagaccggggagatcagtctgaccaggactctggattacgagaac
gatcagcggcgctaccttctgatggtgcgagccaacgaagagccgggcagcctcagcatg
gccacagaggttcaggtgttgataacggatgaaaacgactgtgtccctgagttcctccag
tccatctacagtgtcgatggagtccctgagactgtaaccacggcaacatccctgctgcag
gttttagcaacggactgcgacacagggttaaatgcggagctcacatattacaccctcagc
caggatttcaccatctcaccccatgggactgtttttcctgcgaggcggctcgactatgag
aggccaaaccatttgtatgaatttgtggtgatggcggtggacggtggggatgagcctcat
tctggtaccaccacggtgcgagtgaggatggcaaacgtcaacgatgaagcccctgaattt
tcccagcctgtatatcgaacatttgtttctgaggacgcgggccccaacactcttgttgcc
acagtcttggccaaggacccagatggtgacagtataatttactccataacagccggcaac
gaagaaggaaactttgtcattgacaaccagaaagggttgatccgtctccgctctgctcca
ttgcccaagcttcagggcttggagtatgttctgaatgtaacagccacagatgacaacgca
tcaggcgggccacacgctcttacctcgaccgcccgggtcatcgttggagttgatgatgtg
aacaacaacaaaccaatatttgaagagtgccagcagtatcgtgagcaggcttcagtgctg
gagaaccagccagcagggacttttgtgttgcaagtgcatgcagtggatgcagatgaggga
gcaaatggaaaagtcaaatatggcttaatgcacagagacagcgccatgcccgccttcaga
atccatccagactcaggagtgatcgtgacagccagacgctttgacagggagcggcagaga
gagtattcaattacagtaacggccactgattgggctgaggaaccgctcatcggcatctgt
caactcactgtccagatattggatcagaatgataacagccccaagtttgagaatctgcgc
tatgagtacttcctgagagaagacactttggttggtaccagtttcctccgtgtggcggct
catgatgacgacttcggcactaatgctgccatcacttactccatgtcgctggagcagccc
gagtaccttcgggtcaaccctgtcactggatgggtctatgttaaccaacctatatctcag
aggacctatatcacacgggacataacagcaacagatggaggaaatcgcagcacttctgtg
gagctggcagtcaccatcactaatgtgaagaaccagcctccacagtgggaaaaacaaagc
tacaatgtcgtcatacctgagaacactgccagggacacacccatagtgacagtcaaggca
acctctcagctgggtgacccaagagtgacctacaaccttgaggatgggatggttcctgaa
accaacatgccagttcgtttctacctctccccaaaccgtgaagatggctctgcgtccatc
ctggtgtcagagccgctggactacgagaccactccttttttctcgcttcaagtccgggcg
cagaatgtagctgcagtgcctcttgctgctttcacaagagtatatgttaatattacagat
gtcaacgacaacgtgccatttttcacgtcctcaatctacgaggcctcggtaacagaaggg
gcccaggttgggacttcagttcttcaagtgtctgcccatgacaaagacctgggacttaat
ggagagatcacttactctctgcttagcgacagcagtggcgaccacaatttcttccgtatc
gatccaaaagatgggatcatctgcacagaggctgtgtttgaccgggaggcccgtagctcc
tacctgctggaagttcagtcagaagatggtcaagaatcggcacgacctggcaaaaacaaa
cagcccaacactgacacagcatatgtgagggttttcatcagcgacgtcaacgacaacaaa
cctgtctttgctcagcgactatatgaagtccgcgttgatgagaatgcagatgtgggcttg
gccattgtcactgttggagctaatgacgaggatgaaggtgccaatgccaagctgcgctac
caaataacatctggcaatgaaggtggtgcttttgacattgaaccagaagttggaacaatc
tttattgcacagtcactggactatgagaagcaaaaaaggtacaagcttctggttctagcc
tcagacggcaagtgggaggactacgctgctgttgtagtcaatgttgttaataagaatgac
gaggcacctgtgttttccatgaacaagtactatggatcagtcacagaggagcttgatgga
tcacctgtgtttgtgttacaggtgacggccactgacccagacaaagatgcagaccagggt
gccatacgttactccattcatggccaaggtgcagagtcgcatttcatgatcaatgacatc
acaggggagatgtacgctcagcgcaccatggaccgagaagaacgtgccgtgtggcgattc
gttgtcatggcgacggacgaagaaggcgagggacttactggctttacggatgttattatc
aacgtgtgggacatcaatgacaatgccccaaccttcttgtgctcacctgataattgccat
agtaacgtggctgagaattcacctcctggaacaattgttgtggaaatgacagcagttgat
cttgacgatgcagctgtaggtcaaaacgccatcctcacataccggattacagagaatgca
cataatttgaacaatgcagagcttttcagtattgattccagcactggcaccatatctgtg
tcagcagagggtttggaccgagagcttgctgacagccaccatgtggtagtagaagccaag
gatggtggaggtatgacaggtacagccactgtcactattgtggtaacagacatcaatgac
catgttccaaagtttaaagaggactggtgtggtgctcgtgttcctgagagcacacatgag
gatgcttcccttctggagctgagtgctgtggatcctgatgatggcacgtacggacagctg
gcattcagtgtggtggcaggagattcagagcaacaattctacatggttagtaacagaata
aagcaaaaaggtactttgagactgaagaaaaaggtggactttgagcagcctgcggagcga
cggtttaacctcactatcatggtagaagactcagacttttccagtgttatccactgcttg
attctggtggaggatgaaaatgataacacccctgtatttaccccaagctctcacctgctc
tcccctttgcccgaggacataactgtaggaaccagcgtcattcaggtggaagccactgac
cccgactcaggcctgaatggggacgttttgtacagcatcctttctaattcggaccccttt
gaacattttacagtcagccgtgccggtattgtcactgtcaccaagccactggatagggag
acagtggcaggttatgagctggttgtcatggcgacagaccgtggtacaccagcactgact
ggcagcgttacggtccacttgccgttgctagatatgaatgataacggtccagagctggag
acagtctacacgcctgtgctgtgggagaacggtccagcacctcaagtagtctggcttaac
aggagctcaactctacttcatgttgtggacagagactccccagagcacgggcctcctttt
attctatctctgccttcagttttctctgctgacttccacctacaggatcatgggaatggc
tctggcacactcaccaccctgcgcagatttgacagggaaaggcagagcgagtttcacttg
ccagtgataatgattgacagcggtgttccaccgataacggcaacaaacactctcaccatc
actattggcgatcataatgataacgcccatcaggcaggagagaaagatgtctatgttcat
agccacaagggaaggataggaaatgcagcactagggaaggtgtatgccccagatccagat
gattgggacaacaagacctacagtctggagacaagcgcagccaaatacttcagtctgaat
cagagctctggagttctgtctcttcgacaaaaccctccagccggcagctactggttgaga
gtaggtgtgtctgatggggtgtggcctgacatgatctcaggagtcagggttcatgtcagg
gagttggatgaaaaggccatcctgtcgtctgcctcgctgcgtttgacaggcgttacagca
agagagtttatcgactccagcgtcgaagggaagagtcggctggaggcattctgggacttc
ctgtctgaaaccctgtccgtcagaccaggaagtatcaacattttcagtttagctgacaga
gaggagaaaaccgtagacgtctatttctatgtgctaactgataatggctacttgcggcca
gagaaactgcacagtgtcctcgcagcacataaaagggagctgcagccactcctccatgcg
agtgtgagccaggtgcaggtagatgagtgcgtgcatgctgactgcaagacatccggaggc
tgctacacacagttaagcatcagtgactcacccaccttgatagactctggtgctctatct
ctggtctcagtgaaagtgacatcctcggctgtgtgcggctgtgctgccagagaaatgacc
caccgaccctgctcctcctaccccagtaacccctgccgtaatggggggacatgcattgac
acacaaaatggatacaggtgccgctgccccccacagcttgaggggccagattgtcagcag
acgagacttagtttccttggcaacggctatgcctggtttcctcccataaggccatgctct
gatagccatctttcactcgagtttatgacagaagaagatgatggactgctgctctacgcg
ggcccgttggccactcttttacctggggacacagaagactacatagcaatagagctgatt
ggtgggatgcctagccttaaaatcaaccatggttctgggaccctggtcctccagttaaca
aatgttggggtgggagacagacgctggcatcgccttgatgtgaagagcaacagtaaagaa
gtgcgcttcactctggatcgatgctccagtgccattgtcatggaggcagaaggtgtggaa
gcatgggccatgacagaggaccgctcatcctgtgaaatccgaggggtcacacccaatagg
gacaggtacctgaatggaagtcacgtgctacagcttggaggaatcaacgagaacatatca
tatgaatatcctcagctgcaacacaagcactatagtggatgtataaggaacctgcttgta
gacagcaagctgtatgaccttggttcccccgctgaatcctccaacactttgctgggctgc
agtcttattgataaccactgcgccgacgtggagcagctttcctcctgtggcaagaggggc
agctgtcacggagagagaggctctttcagctgcctgtgtgaaaaaggctttacaggcccg
cagtgcaatcaattggctccggagttttcttttgacggtcggagccacattcagctccag
ctcgagtggtctctgcccactcggctcaccagagtccagattgggattcggacacgtgcc
caagcgggtgtcatcctcagcttgctgtcccaggagcagagtgaatacctacgcttagag
gatgttcagggcctgctggctgttttctacaaccttggagatggagactacaacgttacg
ctgccttactatcgccttgatgacggggagtggcatgaagtggagctggatcggtacgga
agagagtttaccctgagactggatggaggtgggggacgactggaggttacagcctcaccc
ggccaaagtcaggaaattattatagatccctctgtggtcatgcttggaaactcttttccc
tctggacacaaccgcagcttccttggctgtttgcgtgatgtgaggcttaacgggcgcccc
atccccctggatcaggaacagcgtgcagaggggcttcaggtggtcacagcgcagggtgtc
tctgtcggttgctcatcagatgcctgtagaaaacatcactgctcccctcctttggtgtgc
gtggacctctggagacagcatgagtgcaggtgccccccaggccacatgaccagggagagc
tcctcaggcagagtgtgcatctacacactgtgtgccagcaggccgtgtcgccatggcacg
tgcgtggctcactctccgtcacgctactcgtgcctctgcagcgagggctaccgagggcgg
cactgcgaggtagcgctcgccgtgttccacagtgaggacagcaacagcctcagcctgagc
tccatgtttgccatcagcatctgtgtcatggcctttctagtgttgatgctggggctgttt
ctctactcctgctggaggagacacaagggcctcaaggagggggtttaccacgtgtctgct
caccatggcgagtgggaggacatccgagagaacgtgctcaactacgacgaagaaggtgga
ggagaacaggaccagaatgccttcaacatggtggagttgcagcgctcccttcagcccagc
cctgcgcagtcactccgctacagctatccacaaaacatcaactgctacccacagactaag
cttcctcaggacaacaacaaaaaggtcatgctgaatgggaatggcaatgcagctattgct
ttgcgtctggccatccccccctcagaggcagaaaccttatcttcccctttgaccttccgc
cgctctcagcgagccttttccttctccagccaagacttggctcgctacctttgtgaggtc
atgagggacatggagcacacagaggagctcggtaccatgacaacaccacgccgtcccaat
gggaaggagcgcagcctttcctcggtgcactcgctcagctccctcgatgcatctcagggt
tcagaagtcaggctccatgcagcccacataacccggatggacacgttcaaaaccctccga
gctgtggtgtgtgatttaagaggagacaccaaagctccagaaggccagagagacaaactt
aaggagagcaaagggcagatgaactgcgagaagaacatgtga
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integrated database retrieval system
