Kryptolebias marmoratus (mangrove rivulus): 108237571
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Entry
108237571 CDS
T05608
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108237571 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108237571 (nup93)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108237571 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
108237571
NCBI-ProteinID:
XP_017274584
UniProt:
A0A3Q3BQR5
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All DBs
Position
LG11:20483537..20512703
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AA seq
821 aa
AA seq
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MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEVTAPGRSALDS
VEVAYGRQIYIFNEKIVNGHIQPNLGDLLASVAESLEDKNVLEMWLMVKQMTDVLLVPAK
DTIKSRTSVEMQMAFVRQALSFLESRYKDHTMGTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGHPVWAVIYYCLRCGDLNAAMLVVNRVHHQLGDFKTWFQEYMNSP
DKRLSPTSENKLRLHYRRALRNCADPYKRAVYCLIGKCDVNDNHGEVADKTEDYLWLKLN
QVCFDDDSSSSSPQDRLTLPQLQKQLLEDYGESHFSASQHPFLYFQVLFLTAQFEAAVAF
LFRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMVRRLNFIRLLMLYTRK
FESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVI
DKFAGDTRAIISKVALEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPVVAQVSAPQS
NKERLKNTAVATAERYRSQGVAAEKSVNSTFYLLLDLMTFFDEYQAGHVDRAYDVMERLK
LLPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAPAGTPGRSQRTV
EDRGMQLRSQARALITFAGMIPYNMAGDTNARLVQMELLMN
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagaaggttttggagagcttctgcagcaggcagagcagctggctgcagaaaca
gaagctgtgtctgagctgccgcacgtcgaaaggaaccttcaggagattcagcaggctggg
gagagacttcgatcccgcaccttgacccgcacctcccaagacgcagcggatgttaaagca
tcaatcctccttggctccagaggtttagacatcttccacatttctcagaggttggaaagt
ttaagtgctgccaccacctttgagcccctggagccagtcaaagacactgacatacagggc
ttcctgaagaacgagagggacaacgccctcctgtcagccatcgaagagtctcgccgcagg
acgttcctgctggctgaggagtatcatcgtgaatccatgctggttcagtgggagcaggtg
aagcagagagttcttcacactctgctgggagctggagaggatgctctggactttagccaa
gatgtggagccaagctttgtgagcgaagtgacagctccaggaaggagtgcgttggacagt
gtggaggtggcttatggacggcagatttatattttcaatgagaagatagtgaatgggcac
attcagcctaatctgggggatttattagcttcagttgcagaaagccttgaagacaagaac
gttctggagatgtggctgatggtgaagcagatgacggatgtgttgctggttccggccaaa
gacaccattaagagccgcacttcagtggaaatgcagatggcctttgtgcgccaggcgctc
agcttcctcgagagcagatataaagaccacacgatgggaacagtctttgggaacctccac
caggcccagctcggcggtgtacctggaacgtaccagctggtccgcagcttcctcaacatc
aagctgccggggcctctgcctggcatgcaggatggggaggtagaaggccacccggtgtgg
gcagtaatctactactgcctgcgttgtggagatctgaacgcagccatgctggtggtgaac
agggtgcaccaccagctgggtgactttaagacctggtttcaggagtacatgaacagcccc
gacaaacgcctctccccgacttcagagaacaagcttcgccttcactaccgccgagcgctg
aggaactgcgccgatccctacaaaagagccgtctactgcctgatcgggaagtgtgacgtc
aatgacaaccacggagaggtggcagataaaacggaagactacctctggctcaagttgaac
caggtgtgttttgatgatgacagcagcagcagctctcctcaggacagactcactctgcca
cagttacagaagcagctgctggaggactacggggagtcccacttctctgcgagccagcac
cccttcctgtacttccaggtgttgttcctgaccgctcagttcgaggcagctgtggccttc
ctgttccgcgtggagagacttcgcagccacgccgtgcacgtggccttagttttgtacgag
ctgcggctgctgctgaagtcttcgggtcaaagcgctcagctgctgagtcaggagcccggg
gaccctccgatggtgcgacgcctcaacttcatccgcctgctcatgctctacacccgcaag
tttgagtccaccgacccaagagaggctctgcagtacttctacttcctgcgcaatgaaaag
gacagccagggagaaaacatgttcatgcggtgcgtcagtgaacttgttattgagagccga
gagtttgacatgctgttaggaagactagagaaggatggcagcaggaagcctggcgtcata
gataagttcgccggcgacaccagagcgatcatcagcaaagtggctctggaggcggagaac
aaaggcttgtttgaggaggcggtgaagctctacgagctggccaagaacccagataaggtg
ctggagctgatgaacaggctgctgagtccggtcgtcgctcaggtcagcgcaccgcagtcc
aacaaggagaggctgaagaacacggcggtggcgaccgccgagaggtaccgttctcaggga
gtagcagcggagaagtcggtcaacagtacattctacctgcttctggacctgatgacgttc
tttgacgagtaccaggcaggtcacgtcgacagagcctacgatgtgatggagcgtttaaag
ctgcttcctctcagccaggacagcgtggaggagagagtcgcagcttttaggaacttcagc
gatgaggtgcgtcacaacctgtccgaggttctgttggccaccatgaacatcctcttcacc
cagtacaagcgcctgaagggggcgccggcgggcacgccaggccgatcacaaagaaccgta
gaggacagaggcatgcagctgcgcagccaagccagagccctgatcaccttcgctggcatg
attccctacaacatggccggagacacgaacgcaagactggtgcagatggagttactgatg
aactga
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