Kryptolebias marmoratus (mangrove rivulus): 108237612
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Entry
108237612 CDS
T05608
Symbol
zgc:193690
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013
Nucleocytoplasmic transport
kmr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108237612 (zgc:193690)
03015 mRNA surveillance pathway
108237612 (zgc:193690)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmr03019
]
108237612 (zgc:193690)
Enzymes [BR:
kmr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108237612 (zgc:193690)
Messenger RNA biogenesis [BR:
kmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108237612 (zgc:193690)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108237612
NCBI-ProteinID:
XP_017274642
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All DBs
Position
LG8:complement(6674848..6681077)
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AA seq
480 aa
AA seq
DB search
MFKDCWALAVDAQEATSQSCQMFEGNCVNSASDRKHLQKKMSGAATGCEAEGDRVDLAEQ
SLLNKMIRRCLVRNRNQVEVLQADPTSPLYSVRTFEELRLKPELLKGVYEMGFNRPSRIQ
ENALPMMLAQPAQNLIAQSQSGTGKTAAFSLAMLSHVNTANKWTQCLCIAPTYELALQIG
QVIEQMGKFLPDVKLAYAVRGNRMVRGVKLQEHIVIGTPGTVLDWCTKYKLIDPKRITMF
VLDEADVMIATQGHRDQSIRIQRQLSNECQMLLFSATFEDSVWTFAEQLVPDPNIIRLKR
DEETLDTIKQFYVLCGDKEEKFTALCDLYGSLTVAQAMIFCHTRRMAAWLAASLTEEGHQ
VALLSGEMTVEQRAAVIERFRSGKEKVLVTTNVCSRGIDVEQVTLVVNFDLPVNMDGSAD
NETYLHRIGRTGRFGKRGFAVNMVDSKRSMDIINQIEMHFNRKIKKLDTGNSEEMETLLN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagactgttgggctttagcggtggatgctcaggaggccacatctcaatcctgt
cagatgttcgagggtaattgtgtcaactcagctagcgatcgcaagcacctgcagaaaaaa
atgtctggagcggccactggctgtgaagcagaaggggacagggtggacctggctgaacag
tccctgctaaataagatgatccgccgctgcctggtgaggaacagaaaccaggtggaggtc
ctgcaggcagaccccacctctcctctgtactccgtgaggacctttgaggagctccggctg
aagcctgaattgttgaaaggtgtatatgagatgggcttcaacagaccatccagaatccag
gagaacgccttgcccatgatgttggctcagccagctcagaatctgatcgcccagtcacag
tctggcacaggtaaaaccgcggccttctctctggccatgctcagccatgtaaacactgcc
aataaatggactcagtgtctctgtatcgctccgacgtacgagctcgcgctgcagatcggt
caagtgattgagcagatggggaagtttcttccagatgtgaaactggcgtacgcagtgcga
gggaaccgaatggtgcgaggcgttaagctgcaggaacacatcgtcatcggcacgccgggc
accgtcctcgactggtgcaccaagtacaagctcattgaccccaagaggatcaccatgttt
gtgctggatgaagcggacgtgatgatcgccacgcagggccatcgggatcagagcatccgg
atccagaggcagcttagcaacgagtgtcagatgctgcttttctctgcgacctttgaggac
tcggtgtggacgtttgcagagcaactggtccctgaccccaacatcatcaggctgaaacgg
gatgaggagacgctggacaccatcaagcagttttatgtgctgtgtggcgataaggaggag
aagttcacggcactctgtgacctctatgggagcctgactgtcgcgcaggccatgatcttc
tgccatactcggaggatggctgcctggctggctgcgagcctgactgaagagggccaccag
gtggcgctgctgagcggggaaatgacggtggagcagagagcggctgtgatcgaacgcttc
aggagtggcaaagagaaggtgctcgtcaccacgaacgtgtgttccagaggaatcgacgtg
gagcaggtgaccctcgtagtcaactttgacctcccggtgaacatggatggaagcgctgac
aatgagacgtacctgcatcggatcggccgcacagggcgctttggcaaacgaggattcgct
gtcaacatggtggacagcaaacgcagcatggatatcatcaaccaaattgagatgcatttc
aaccggaagataaaaaaacttgacactggcaattcagaagaaatggagactctgctaaac
tga
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